RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 NDUFB9Q9Y6M9 179 aa11.78□□□□□ -0.52
NPLOC4-212ENST00000573328 KIAA0100Q14667 2235 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 CYP7A1P22680 504 aa11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 LACTBP83111 547 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 SLC9C1Q4G0N8 1177 aa11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 FASTKD5Q7L8L6 764 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 ADGRA1Q86SQ6 560 aa11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 CCDC84Q86UT8 332 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 CRACR2BQ8N4Y2 399 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 RHPN1Q8TCX5 695 aa11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 ARHGAP39Q9C0H5 1083 aa11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 PTCH2Q9Y6C5 1203 aa11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 FLT1P17948 1338 aa11.77□□□□□ -0.53
NPLOC4-212ENST00000573328 A0A0G2JLL6 359 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 TBC1D12O60347 775 aa11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 IFIT2P09913 472 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 CAP1Q01518 475 aa11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 MAP3K10Q02779 954 aa11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 SLC4A8Q2Y0W8 1093 aa11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 PRRT2Q7Z6L0 340 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 RPAP2Q8IXW5 612 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 MAGEB6Q8N7X4 407 aa11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 KIF1BPQ96EK5 621 aa11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 AFG3L2Q9Y4W6 797 aa11.76□□□□□ -0.53
NPLOC4-212ENST00000573328 DDX60LQ5H9U9 1706 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 IGSF3O75054 1194 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 FMNL1O95466 1100 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 HLA-DOAP06340 250 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 CYP2C8P10632 490 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 PSMC4P43686 418 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 USP5P45974 858 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 DYNLL1P63167 89 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 MAP3K12Q12852 859 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 MOGSQ13724 837 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 C17orf99Q6UX52 265 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 NBPF11Q86T75 865 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 MIGA1Q8NAN2 632 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 DNAJC2Q99543 621 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 ZBTB40Q9NUA8 1239 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 PI4KBQ9UBF8 816 aa11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 SAP30BPQ9UHR5 308 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 BAZ2AQ9UIF9 1905 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-212ENST00000573328 DOCK3Q8IZD9 2030 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 GNRH1P01148 92 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 PPP4CP60510 307 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 GPAT2Q6NUI2 795 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 CERS3Q8IU89 383 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 TMEM106CQ9BVX2 250 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 ANTXR1Q9H6X2 564 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 AS3MTQ9HBK9 375 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 PNMA3Q9UL41 463 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 ADGRA2Q96PE1 1338 aa11.74□□□□□ -0.53
NPLOC4-212ENST00000573328 POTEFA5A3E0 1075 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 USP17L5A8MUK1 530 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 HOXD10P28358 340 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 CAP2P40123 477 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 PRMT2P55345 433 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 SPP2Q13103 211 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 C20orf194Q5TEA3 1177 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 MYPNQ86TC9 1320 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 RAET1EQ8TD07 263 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 SH3TC2Q8TF17 1288 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 ARMC5Q96C12 935 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 AGTPBP1Q9UPW5 1226 aa11.73□□□□□ -0.53
NPLOC4-212ENST00000573328 GOLIM4O00461 696 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 RAB11FIP3O75154 756 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 GDF11O95390 407 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 ASNSP08243 561 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 HMGCS2P54868 508 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 FCGRTP55899 365 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 PDE3AQ14432 1141 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 SIRT2Q8IXJ6 389 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 PROCA1Q8NCQ7 364 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 ZNF333Q96JL9 665 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 TRIM47Q96LD4 638 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 SLC45A1Q9Y2W3 748 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 BRCA2P51587 3418 aa11.72□□□□□ -0.53
NPLOC4-212ENST00000573328 MAGEB6P1A0A0J9YX57 407 aa11.71□□□□□ -0.53
NPLOC4-212ENST00000573328 BCRP11274 1271 aa11.71□□□□□ -0.53
NPLOC4-212ENST00000573328 OSBPP22059 807 aa11.71□□□□□ -0.53
NPLOC4-212ENST00000573328 PABPC4Q13310 644 aaKnown RBP eCLIP11.71□□□□□ -0.53
NPLOC4-212ENST00000573328 RRP1BQ14684 758 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-212ENST00000573328 TREML2Q5T2D2 321 aa11.71□□□□□ -0.53
NPLOC4-212ENST00000573328 TMED8Q6PL24 325 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-212ENST00000573328 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-212ENST00000573328 SRRDQ9UH36 339 aa11.71□□□□□ -0.53
NPLOC4-212ENST00000573328 PDE6AP16499 860 aa11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 CTGFP29279 349 aa11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 MTMR2Q13614 643 aa11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 FOXP4Q8IVH2 680 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms