RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 NCAM1P13591 858 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 GARTP22102 1010 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 PTPREP23469 700 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 TSPAN7P41732 249 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 ZBED6P86452 979 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 CBX2Q14781 532 aaPredicted RBP6□□□□□ -1.45
TOPBP1-210ENST00000572787 SNAP47Q5SQN1 464 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 GPR158Q5T848 1215 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 SYDE2Q5VT97 1194 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 CNNM4Q6P4Q7 775 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 SH3BP5LQ7L8J4 393 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 EEPD1Q7L9B9 569 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 LRRTM3Q86VH5 581 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 SKAP1Q86WV1 359 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 SPATS2Q86XZ4 545 aaKnown RBP6□□□□□ -1.45
TOPBP1-210ENST00000572787 FAM186BQ8IYM0 893 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 AHI1Q8N157 1196 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 ZBTB38Q8NAP3 1195 aaPredicted RBP6□□□□□ -1.45
TOPBP1-210ENST00000572787 ACRBPQ8NEB7 543 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 ZNF496Q96IT1 587 aaPredicted RBP6□□□□□ -1.45
TOPBP1-210ENST00000572787 TMEM87BQ96K49 555 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 PPM1MQ96MI6 270 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 FERD3LQ96RJ6 166 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 SPATA9Q9BWV2 254 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 GGNBP2Q9H3C7 697 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 CHMP4BQ9H444 224 aaKnown RBP6□□□□□ -1.45
TOPBP1-210ENST00000572787 BCL2L12Q9HB09 334 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 KIAA1586Q9HCI6 787 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 PPP4R2Q9NY27 417 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 IP6K2Q9UHH9 426 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 TRHDEQ9UKU6 1024 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 PNMA8BQ9ULN7 279 aaPredicted RBP6□□□□□ -1.45
TOPBP1-210ENST00000572787 GABRDO14764 452 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 FBXO21O94952 628 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 NPTXRO95502 500 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 FLT3P36888 993 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 AK2P54819 239 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 GDF10P55107 478 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 PSMC1P62191 440 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 STRN3Q13033 797 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 FBXW10Q5XX13 1052 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 LCA5Q86VQ0 697 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 FCHSD1Q86WN1 690 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 TPH2Q8IWU9 490 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 SPATA5Q8NB90 893 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 GOLM1Q8NBJ4 401 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 NAXEQ8NCW5 288 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 PHC3Q8NDX5 983 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 LEO1Q8WVC0 666 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 MYD88Q99836 296 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 TRIM56Q9BRZ2 755 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 ESYT1Q9BSJ8 1104 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 TNKS2Q9H2K2 1166 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 NCOA5Q9HCD5 579 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 TCF7L1Q9HCS4 588 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 SAGE1Q9NXZ1 904 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 FAM50BQ9Y247 325 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 ZNF652Q9Y2D9 606 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 SALL2Q9Y467 1007 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 AFG3L2Q9Y4W6 797 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 TNKSO95271 1327 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 SYNRGQ9UMZ2 1314 aa5.99□□□□□ -1.45
TOPBP1-210ENST00000572787 A0A087WZG4 1122 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 PMM2O15305 246 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 DDX3YO15523 660 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 PF4P02776 101 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 IMPDH2P12268 514 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 HSD3B1P14060 373 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 PSMA3P25788 255 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 PIK3CAP42336 1068 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 PSMA6P60900 246 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 FOXK2Q01167 660 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 LMNB2Q03252 620 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 LAMC2Q13753 1193 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 GTF2H3Q13889 308 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 MAP7Q14244 749 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 STAT4Q14765 748 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 DHCR24Q15392 516 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 PDCD2Q16342 344 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 SEZ6Q53EL9 994 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 RC3H1Q5TC82 1133 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 RNF19BQ6ZMZ0 732 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 SRLQ86TD4 932 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 PNMA8AQ86V59 439 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 MYLK4Q86YV6 388 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 GPR152Q8TDT2 470 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 ANKRD24Q8TF21 1146 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 SLC7A3Q8WY07 619 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 DDX1Q92499 740 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 TRIM63Q969Q1 353 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 CLIP3Q96DZ5 547 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 SLC4A9Q96Q91 983 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 ZBED2Q9BTP6 218 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 CXorf56Q9H5V9 222 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 DDX21Q9NR30 783 aaKnown RBP eCLIP5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 ANKRD6Q9Y2G4 727 aa5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 FRMPD2Q68DX3 1309 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-210ENST00000572787 TMCC2O75069 709 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 GADD45BO75293 160 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms