RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SMC5Q8IY18 1101 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 ANKRD13AQ8IZ07 590 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 ZKSCAN4Q969J2 545 aaPredicted RBP10.6□□□□□ -0.71
SMG6-210ENST00000572205 PTPN18Q99952 460 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 R3HDMLQ9H3Y0 253 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 SAGE1Q9NXZ1 904 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 AATFQ9NY61 560 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMG6-210ENST00000572205 RAI14Q9P0K7 980 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.6□□□□□ -0.71
SMG6-210ENST00000572205 PLXNB2O15031 1838 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 GOLIM4O00461 696 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 PPP1R12BO60237 982 aaPredicted RBP10.59□□□□□ -0.71
SMG6-210ENST00000572205 MAP4K4O95819 1239 aaPredicted RBP10.59□□□□□ -0.71
SMG6-210ENST00000572205 IGHDP01880 384 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 IREB2P48200 963 aaKnown RBP10.59□□□□□ -0.71
SMG6-210ENST00000572205 LBX1P52954 281 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 GSTO1P78417 241 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 JAG1P78504 1218 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 MKRN3Q13064 507 aaKnown RBP10.59□□□□□ -0.71
SMG6-210ENST00000572205 SHROOM1Q2M3G4 852 aaPredicted RBP10.59□□□□□ -0.71
SMG6-210ENST00000572205 MIGA2Q7L4E1 593 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 MAGEB6Q8N7X4 407 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 OPTNQ96CV9 577 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 WRNIP1Q96S55 665 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 ELP3Q9H9T3 547 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 PRDM10Q9NQV6 1147 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 RNF186Q9NXI6 227 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 TMOD2Q9NZR1 351 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 LRP2BPQ9P2M1 347 aa10.59□□□□□ -0.71
SMG6-210ENST00000572205 SUPT16HQ9Y5B9 1047 aaKnown RBP10.59□□□□□ -0.71
SMG6-210ENST00000572205 ADGRA2Q96PE1 1338 aa10.58□□□□□ -0.71
SMG6-210ENST00000572205 MKI67P46013 3256 aaKnown RBP10.58□□□□□ -0.72
SMG6-210ENST00000572205 FAM196BA6NMK8 535 aa10.58□□□□□ -0.72
SMG6-210ENST00000572205 IDH1O75874 414 aaKnown RBP10.58□□□□□ -0.72
SMG6-210ENST00000572205 IFIT2P09913 472 aaKnown RBP10.58□□□□□ -0.72
SMG6-210ENST00000572205 ADD2P35612 726 aa10.58□□□□□ -0.72
SMG6-210ENST00000572205 CTCFP49711 727 aaPredicted RBP10.58□□□□□ -0.72
SMG6-210ENST00000572205 PDAP1Q13442 181 aaKnown RBP10.58□□□□□ -0.72
SMG6-210ENST00000572205 PICALMQ13492 652 aa10.58□□□□□ -0.72
SMG6-210ENST00000572205 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
SMG6-210ENST00000572205 ZNF467Q7Z7K2 595 aaPredicted RBP10.58□□□□□ -0.72
SMG6-210ENST00000572205 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
SMG6-210ENST00000572205 MIGA1Q8NAN2 632 aa10.58□□□□□ -0.72
SMG6-210ENST00000572205 BRI3BPQ8WY22 251 aa10.58□□□□□ -0.72
SMG6-210ENST00000572205 BOLA2Q9H3K6 86 aa10.58□□□□□ -0.72
SMG6-210ENST00000572205 PAG1Q9NWQ8 432 aa10.58□□□□□ -0.72
SMG6-210ENST00000572205 ZNF532Q9HCE3 1301 aa10.58□□□□□ -0.72
SMG6-210ENST00000572205 SMIM22K7EJ46 135 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 TBC1D12O60347 775 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 LDHCP07864 332 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 CYP7A1P22680 504 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 MAP3K9P80192 1104 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 TMED8Q6PL24 325 aaPredicted RBP10.57□□□□□ -0.72
SMG6-210ENST00000572205 TEX11Q8IYF3 940 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 LCORLQ8N3X6 602 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 DNAJC2Q99543 621 aaKnown RBP10.57□□□□□ -0.72
SMG6-210ENST00000572205 ZNF341Q9BYN7 854 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 ECHDC1Q9NTX5 307 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 PCDHB8Q9UN66 801 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 KCNH4Q9UQ05 1017 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 PCDHB13Q9Y5F0 798 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 TTC41PQ6P2S7 1318 aa10.57□□□□□ -0.72
SMG6-210ENST00000572205 IRF6O14896 467 aa10.56□□□□□ -0.72
SMG6-210ENST00000572205 FOXP2O15409 715 aa10.56□□□□□ -0.72
SMG6-210ENST00000572205 CA12O43570 354 aa10.56□□□□□ -0.72
SMG6-210ENST00000572205 PPP1R37O75864 691 aa10.56□□□□□ -0.72
SMG6-210ENST00000572205 PPIL2Q13356 520 aa10.56□□□□□ -0.72
SMG6-210ENST00000572205 AAMPQ13685 434 aa10.56□□□□□ -0.72
SMG6-210ENST00000572205 NOM1Q5C9Z4 860 aaKnown RBP10.56□□□□□ -0.72
SMG6-210ENST00000572205 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
SMG6-210ENST00000572205 MAPKAPK5Q8IW41 473 aa10.56□□□□□ -0.72
SMG6-210ENST00000572205 SLC24A3Q9HC58 644 aa10.56□□□□□ -0.72
SMG6-210ENST00000572205 STAP2Q9UGK3 403 aa10.56□□□□□ -0.72
SMG6-210ENST00000572205 MYH4Q9Y623 1939 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 CACNB1Q02641 598 aaPredicted RBP10.55□□□□□ -0.72
SMG6-210ENST00000572205 GABPAQ06546 454 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 MAP3K12Q12852 859 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 TTF1Q15361 905 aaPredicted RBP10.55□□□□□ -0.72
SMG6-210ENST00000572205 SLC9C2Q5TAH2 1124 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 DCAF15Q66K64 600 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 CCDC84Q86UT8 332 aaPredicted RBP10.55□□□□□ -0.72
SMG6-210ENST00000572205 ERO1BQ86YB8 467 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 SCYL3Q8IZE3 742 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 FAM43AQ8N2R8 423 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 KBTBD3Q8NAB2 608 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 TGFBRAP1Q8WUH2 860 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 OTUD5Q96G74 571 aa10.55□□□□□ -0.72
SMG6-210ENST00000572205 TSPYL2Q9H2G4 693 aaPredicted RBP10.55□□□□□ -0.72
SMG6-210ENST00000572205 ROBO3Q96MS0 1386 aa10.54□□□□□ -0.72
SMG6-210ENST00000572205 COL11A1P12107 1806 aaPredicted RBP10.54□□□□□ -0.72
SMG6-210ENST00000572205 MANSC4A6NHS7 340 aaPredicted RBP10.54□□□□□ -0.72
SMG6-210ENST00000572205 TRPA1O75762 1119 aa10.54□□□□□ -0.72
SMG6-210ENST00000572205 PTPRAP18433 802 aa10.54□□□□□ -0.72
SMG6-210ENST00000572205 MX1P20591 662 aa10.54□□□□□ -0.72
SMG6-210ENST00000572205 IRX6P78412 446 aaPredicted RBP10.54□□□□□ -0.72
SMG6-210ENST00000572205 PPATQ06203 517 aa10.54□□□□□ -0.72
SMG6-210ENST00000572205 UBE3CQ15386 1083 aa10.54□□□□□ -0.72
SMG6-210ENST00000572205 AIDAQ96BJ3 306 aa10.54□□□□□ -0.72
SMG6-210ENST00000572205 GCC1Q96CN9 775 aa10.54□□□□□ -0.72
SMG6-210ENST00000572205 SLC10A4Q96EP9 437 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms