RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
CIITA-207ENST00000571545 SH3BP5LQ7L8J4 393 aa11.89□□□□□ -0.51
CIITA-207ENST00000571545 RPAP2Q8IXW5 612 aaPredicted RBP11.89□□□□□ -0.51
CIITA-207ENST00000571545 ZNF384Q8TF68 577 aa11.89□□□□□ -0.51
CIITA-207ENST00000571545 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
CIITA-207ENST00000571545 AS3MTQ9HBK9 375 aa11.89□□□□□ -0.51
CIITA-207ENST00000571545 GINM1Q9NU53 330 aa11.89□□□□□ -0.51
CIITA-207ENST00000571545 DBNLQ9UJU6 430 aaKnown RBP11.89□□□□□ -0.51
CIITA-207ENST00000571545 AFG3L2Q9Y4W6 797 aa11.89□□□□□ -0.51
CIITA-207ENST00000571545 LOC285556D6RIA3 1793 aa11.88□□□□□ -0.51
CIITA-207ENST00000571545 CYP2E1P05181 493 aaPredicted RBP11.88□□□□□ -0.51
CIITA-207ENST00000571545 FCGRTP55899 365 aa11.88□□□□□ -0.51
CIITA-207ENST00000571545 MAP3K12Q12852 859 aa11.88□□□□□ -0.51
CIITA-207ENST00000571545 GADL1Q6ZQY3 521 aa11.88□□□□□ -0.51
CIITA-207ENST00000571545 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
CIITA-207ENST00000571545 PROCA1Q8NCQ7 364 aaPredicted RBP11.88□□□□□ -0.51
CIITA-207ENST00000571545 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
CIITA-207ENST00000571545 KIF1BPQ96EK5 621 aa11.88□□□□□ -0.51
CIITA-207ENST00000571545 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
CIITA-207ENST00000571545 ADGRA2Q96PE1 1338 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 ASNSP08243 561 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 ZAP70P43403 619 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 PRPF38BQ5VTL8 546 aaKnown RBP11.87□□□□□ -0.51
CIITA-207ENST00000571545 AACSQ86V21 672 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 CRACR2BQ8N4Y2 399 aaPredicted RBP11.87□□□□□ -0.51
CIITA-207ENST00000571545 PANK1Q8TE04 598 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
CIITA-207ENST00000571545 ZNF333Q96JL9 665 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 AGTPBP1Q9UPW5 1226 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 EXOC6BQ9Y2D4 811 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 PTCH2Q9Y6C5 1203 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 MGAMO43451 1857 aa11.87□□□□□ -0.51
CIITA-207ENST00000571545 MYO5AQ9Y4I1 1855 aaKnown RBP11.87□□□□□ -0.51
CIITA-207ENST00000571545 FLT1P17948 1338 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 KIAA0100Q14667 2235 aaKnown RBP11.86□□□□□ -0.51
CIITA-207ENST00000571545 TRIM75PA6NK02 468 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 USP17L5A8MUK1 530 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 RAB11FIP3O75154 756 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 IDH1O75874 414 aaKnown RBP11.86□□□□□ -0.51
CIITA-207ENST00000571545 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
CIITA-207ENST00000571545 CAP2P40123 477 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 PSMC4P43686 418 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 MOGSQ13724 837 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 FOXP4Q8IVH2 680 aaPredicted RBP11.86□□□□□ -0.51
CIITA-207ENST00000571545 ZNF280CQ8ND82 737 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 RAET1EQ8TD07 263 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 EAF2Q96CJ1 260 aaPredicted RBP11.86□□□□□ -0.51
CIITA-207ENST00000571545 CCDC8Q9H0W5 538 aaPredicted RBP11.86□□□□□ -0.51
CIITA-207ENST00000571545 CPA4Q9UI42 421 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 MYH1P12882 1939 aa11.86□□□□□ -0.51
CIITA-207ENST00000571545 IFIT2P09913 472 aaKnown RBP11.85□□□□□ -0.51
CIITA-207ENST00000571545 CYP7A1P22680 504 aa11.85□□□□□ -0.51
CIITA-207ENST00000571545 PDE3AQ14432 1141 aa11.85□□□□□ -0.51
CIITA-207ENST00000571545 SLC4A8Q2Y0W8 1093 aa11.85□□□□□ -0.51
CIITA-207ENST00000571545 GPAT2Q6NUI2 795 aa11.85□□□□□ -0.51
CIITA-207ENST00000571545 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
CIITA-207ENST00000571545 RHPN1Q8TCX5 695 aa11.85□□□□□ -0.51
CIITA-207ENST00000571545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.85□□□□□ -0.51
CIITA-207ENST00000571545 TGFBRAP1Q8WUH2 860 aa11.85□□□□□ -0.51
CIITA-207ENST00000571545 TLR7Q9NYK1 1049 aaKnown RBP11.85□□□□□ -0.51
CIITA-207ENST00000571545 SRRDQ9UH36 339 aa11.85□□□□□ -0.51
CIITA-207ENST00000571545 MYPNQ86TC9 1320 aa11.85□□□□□ -0.51
CIITA-207ENST00000571545 ZSWIM8A7E2V4 1837 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 SIPA1L1O43166 1804 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 BCRP11274 1271 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 CAPN2P17655 700 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 OSBPP22059 807 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 USP5P45974 858 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 GCLCP48506 637 aaPredicted RBP11.84□□□□□ -0.51
CIITA-207ENST00000571545 UBXN2AP68543 259 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 FAM110CQ1W6H9 321 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 TTC6Q86TZ1 520 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
CIITA-207ENST00000571545 MAPKAPK5Q8IW41 473 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 TRIM47Q96LD4 638 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 ARHGAP39Q9C0H5 1083 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 PIH1D3Q9NQM4 214 aaKnown RBP11.84□□□□□ -0.51
CIITA-207ENST00000571545 ZBTB40Q9NUA8 1239 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 TAOK2Q9UL54 1235 aa11.84□□□□□ -0.51
CIITA-207ENST00000571545 FAM196BA6NMK8 535 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 C19orf81C9J6K1 198 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 CYP2C8P10632 490 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 GRK4P32298 578 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 SPP2Q13103 211 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 SH3D19Q5HYK7 790 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 MAGEB6Q8N7X4 407 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 SLAIN1Q8ND83 568 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 GTF3C2Q8WUA4 911 aaPredicted RBP11.83□□□□□ -0.52
CIITA-207ENST00000571545 WDR18Q9BV38 432 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 EHD4Q9H223 541 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 COG6Q9Y2V7 657 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 TNRC18O15417 2968 aaPredicted RBP11.83□□□□□ -0.52
CIITA-207ENST00000571545 HTTP42858 3142 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 NAV1Q8NEY1 1877 aa11.83□□□□□ -0.52
CIITA-207ENST00000571545 HMGCS2P54868 508 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms