RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 WBP1LQ9NX94 342 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 DOCK1Q14185 1865 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 A0A0D9SFI3 127 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 GPAA1O43292 621 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 PPP1R12BO60237 982 aaPredicted RBP8.43□□□□□ -1.06
SMG6-209ENST00000571442 PLCG2P16885 1265 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 ECE1P42892 770 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 USP5P45974 858 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 IREB2P48200 963 aaKnown RBP8.43□□□□□ -1.06
SMG6-209ENST00000571442 LBX1P52954 281 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 MAP3K9P80192 1104 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 KIF23Q02241 960 aaPredicted RBP8.43□□□□□ -1.06
SMG6-209ENST00000571442 MAP2K1Q02750 393 aaPredicted RBP8.43□□□□□ -1.06
SMG6-209ENST00000571442 TTC22Q5TAA0 569 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 SPRYD7Q5W111 196 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 CENPQQ7L2Z9 268 aaPredicted RBP8.43□□□□□ -1.06
SMG6-209ENST00000571442 ZNF589Q86UQ0 364 aaPredicted RBP8.43□□□□□ -1.06
SMG6-209ENST00000571442 METTL16Q86W50 562 aaKnown RBP8.43□□□□□ -1.06
SMG6-209ENST00000571442 EVI5LQ96CN4 794 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 WNK4Q96J92 1243 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 NOL10Q9BSC4 688 aaKnown RBP8.43□□□□□ -1.06
SMG6-209ENST00000571442 BEGAINQ9BUH8 593 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 ZNF341Q9BYN7 854 aa8.43□□□□□ -1.06
SMG6-209ENST00000571442 PTPRFP10586 1907 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 GSG1L2A8MUP6 293 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 TRIM6-TRIM34B2RNG4 842 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 HSPA8P11142 646 aaKnown RBP8.42□□□□□ -1.06
SMG6-209ENST00000571442 SDSP20132 328 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 NMIQ13287 307 aaPredicted RBP8.42□□□□□ -1.06
SMG6-209ENST00000571442 VPS53Q5VIR6 699 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 TMED8Q6PL24 325 aaPredicted RBP8.42□□□□□ -1.06
SMG6-209ENST00000571442 ANKRD13AQ8IZ07 590 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 SLC44A5Q8NCS7 719 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 RILPL2Q969X0 211 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 OPTNQ96CV9 577 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 DYNLL2Q96FJ2 89 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 CRNKL1Q9BZJ0 848 aaKnown RBP8.42□□□□□ -1.06
SMG6-209ENST00000571442 TACC3Q9Y6A5 838 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 SLC4A4Q9Y6R1 1079 aa8.42□□□□□ -1.06
SMG6-209ENST00000571442 TBC1D12O60347 775 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 NEFLP07196 543 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 ZFYP08048 801 aaPredicted RBP8.41□□□□□ -1.06
SMG6-209ENST00000571442 GABPAQ06546 454 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 NOL9Q5SY16 702 aaKnown RBP8.41□□□□□ -1.06
SMG6-209ENST00000571442 DCAF15Q66K64 600 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 ZSCAN25Q6NSZ9 544 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 CTR9Q6PD62 1173 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 CCDC102AQ96A19 550 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 SLC10A4Q96EP9 437 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 OTUD5Q96G74 571 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 CCDC136Q96JN2 1154 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 MS4A4AQ96JQ5 239 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 PTPN18Q99952 460 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMG6-209ENST00000571442 MCM9Q9NXL9 1143 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 PI4KBQ9UBF8 816 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 TSKSQ9UJT2 592 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 MYH8P13535 1937 aa8.41□□□□□ -1.06
SMG6-209ENST00000571442 SPDYE5A6NIY4 337 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 USP17L12C9JPN9 530 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 USP17L21D6R901 530 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 IRF6O14896 467 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 GDF11O95390 407 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 PTPRAP18433 802 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 SHMT1P34896 483 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 NOGQ13253 232 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 DGKZQ13574 1117 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 MOGSQ13724 837 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 SCYL3Q8IZE3 742 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 NKX2-3Q8TAU0 364 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 DHX36Q9H2U1 1008 aaKnown RBP8.4□□□□□ -1.06
SMG6-209ENST00000571442 R3HDMLQ9H3Y0 253 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 CASP8AP2Q9UKL3 1982 aa8.4□□□□□ -1.06
SMG6-209ENST00000571442 IGF2BP3O00425 579 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMG6-209ENST00000571442 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
SMG6-209ENST00000571442 GUCY1A2P33402 732 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 MAP2K2P36507 400 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 CAP2P40123 477 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 C12orf60Q5U649 245 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 TATDN1Q6P1N9 297 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 CERS3Q8IU89 383 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 FOXP4Q8IVH2 680 aaPredicted RBP8.39□□□□□ -1.07
SMG6-209ENST00000571442 IFNL3Q8IZI9 196 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 STK11IPQ8N1F8 1099 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 BRI3BPQ8WY22 251 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 HOOK2Q96ED9 719 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 EHD4Q9H223 541 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 INCENPQ9NQS7 918 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 ATP8A2Q9NTI2 1148 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 PPP4R2Q9NY27 417 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 HERC5Q9UII4 1024 aaKnown RBP8.39□□□□□ -1.07
SMG6-209ENST00000571442 SERPINB13Q9UIV8 391 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 CSADQ9Y600 493 aa8.39□□□□□ -1.07
SMG6-209ENST00000571442 GREB1LQ9C091 1923 aaPredicted RBP8.39□□□□□ -1.07
SMG6-209ENST00000571442 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
SMG6-209ENST00000571442 UNCXA6NJT0 531 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 PATL2C9JE40 543 aaKnown RBP8.38□□□□□ -1.07
SMG6-209ENST00000571442 CTNND1O60716 968 aaKnown RBP8.38□□□□□ -1.07
SMG6-209ENST00000571442 HLA-DOAP06340 250 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 ZBTB48P10074 688 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms