RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 CAP1Q01518 475 aa36.94■■■■□ 3.5
CTDNEP1-206ENST00000571409 SIPA1L1O43166 1804 aa36.94■■■■□ 3.5
CTDNEP1-206ENST00000571409 MIGA1Q8NAN2 632 aa36.93■■■■□ 3.5
CTDNEP1-206ENST00000571409 PI4KBQ9UBF8 816 aa36.93■■■■□ 3.5
CTDNEP1-206ENST00000571409 HERC5Q9UII4 1024 aaKnown RBP36.93■■■■□ 3.5
CTDNEP1-206ENST00000571409 A0A0G2JLL6 359 aaPredicted RBP36.92■■■■□ 3.5
CTDNEP1-206ENST00000571409 MLLT1Q03111 559 aaPredicted RBP36.92■■■■□ 3.5
CTDNEP1-206ENST00000571409 TTF1Q15361 905 aaPredicted RBP36.92■■■■□ 3.5
CTDNEP1-206ENST00000571409 PRRT2Q7Z6L0 340 aaPredicted RBP36.92■■■■□ 3.5
CTDNEP1-206ENST00000571409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP36.92■■■■□ 3.5
CTDNEP1-206ENST00000571409 ATAD5Q96QE3 1844 aa36.92■■■■□ 3.5
CTDNEP1-206ENST00000571409 CCDC84Q86UT8 332 aaPredicted RBP36.91■■■■□ 3.5
CTDNEP1-206ENST00000571409 PTPN22Q9Y2R2 807 aa36.91■■■■□ 3.5
CTDNEP1-206ENST00000571409 GPAT2Q6NUI2 795 aa36.9■■■■□ 3.5
CTDNEP1-206ENST00000571409 TMED8Q6PL24 325 aaPredicted RBP36.9■■■■□ 3.5
CTDNEP1-206ENST00000571409 CERS3Q8IU89 383 aa36.9■■■■□ 3.5
CTDNEP1-206ENST00000571409 PTPRFP10586 1907 aa36.9■■■■□ 3.5
CTDNEP1-206ENST00000571409 ARHGEF6Q15052 776 aa36.89■■■■□ 3.5
CTDNEP1-206ENST00000571409 FASTKD5Q7L8L6 764 aaKnown RBP36.89■■■■□ 3.5
CTDNEP1-206ENST00000571409 DNAJC2Q99543 621 aaKnown RBP36.89■■■■□ 3.5
CTDNEP1-206ENST00000571409 PALD1Q9ULE6 856 aa36.89■■■■□ 3.5
CTDNEP1-206ENST00000571409 TRIM75PA6NK02 468 aa36.88■■■■□ 3.49
CTDNEP1-206ENST00000571409 CAP2P40123 477 aa36.88■■■■□ 3.49
CTDNEP1-206ENST00000571409 GADL1Q6ZQY3 521 aa36.88■■■■□ 3.49
CTDNEP1-206ENST00000571409 SAP30BPQ9UHR5 308 aaKnown RBP36.88■■■■□ 3.49
CTDNEP1-206ENST00000571409 GOLIM4O00461 696 aa36.87■■■■□ 3.49
CTDNEP1-206ENST00000571409 RRP1BQ14684 758 aaKnown RBP36.87■■■■□ 3.49
CTDNEP1-206ENST00000571409 C17orf99Q6UX52 265 aa36.87■■■■□ 3.49
CTDNEP1-206ENST00000571409 LRRCC1Q9C099 1032 aa36.87■■■■□ 3.49
CTDNEP1-206ENST00000571409 CPA4Q9UI42 421 aa36.87■■■■□ 3.49
CTDNEP1-206ENST00000571409 PARK7Q99497 189 aaKnown RBP36.86■■■■□ 3.49
CTDNEP1-206ENST00000571409 ZSWIM8A7E2V4 1837 aa36.86■■■■□ 3.49
CTDNEP1-206ENST00000571409 ADGRA2Q96PE1 1338 aa36.85■■■■□ 3.49
CTDNEP1-206ENST00000571409 USP5P45974 858 aa36.85■■■■□ 3.49
CTDNEP1-206ENST00000571409 LACTBP83111 547 aaPredicted RBP36.85■■■■□ 3.49
CTDNEP1-206ENST00000571409 KIF22Q14807 665 aa36.85■■■■□ 3.49
CTDNEP1-206ENST00000571409 CRACR2BQ8N4Y2 399 aaPredicted RBP36.85■■■■□ 3.49
CTDNEP1-206ENST00000571409 TRIM34Q9BYJ4 488 aa36.85■■■■□ 3.49
CTDNEP1-206ENST00000571409 HLA-DOAP06340 250 aa36.84■■■■□ 3.49
CTDNEP1-206ENST00000571409 FOXP4Q8IVH2 680 aaPredicted RBP36.84■■■■□ 3.49
CTDNEP1-206ENST00000571409 ARHGAP39Q9C0H5 1083 aa36.84■■■■□ 3.49
CTDNEP1-206ENST00000571409 DNAJC18Q9H819 358 aa36.84■■■■□ 3.49
CTDNEP1-206ENST00000571409 MYH1P12882 1939 aa36.84■■■■□ 3.49
CTDNEP1-206ENST00000571409 PDE6AP16499 860 aa36.83■■■■□ 3.49
CTDNEP1-206ENST00000571409 SLC4A8Q2Y0W8 1093 aa36.83■■■■□ 3.49
CTDNEP1-206ENST00000571409 SLC9C2Q5TAH2 1124 aa36.83■■■■□ 3.49
CTDNEP1-206ENST00000571409 METTL16Q86W50 562 aaKnown RBP36.83■■■■□ 3.49
CTDNEP1-206ENST00000571409 BOLA2Q9H3K6 86 aa36.83■■■■□ 3.49
CTDNEP1-206ENST00000571409 CYP2C8P10632 490 aa36.82■■■■□ 3.48
CTDNEP1-206ENST00000571409 EDC3Q96F86 508 aaKnown RBP36.82■■■■□ 3.48
CTDNEP1-206ENST00000571409 USP17L5A8MUK1 530 aa36.81■■■■□ 3.48
CTDNEP1-206ENST00000571409 SMARCA5O60264 1052 aaPredicted RBP36.81■■■■□ 3.48
CTDNEP1-206ENST00000571409 ATP5JP18859 108 aa36.81■■■■□ 3.48
CTDNEP1-206ENST00000571409 SPP2Q13103 211 aa36.81■■■■□ 3.48
CTDNEP1-206ENST00000571409 ZNF280CQ8ND82 737 aa36.81■■■■□ 3.48
CTDNEP1-206ENST00000571409 YTHDC1Q96MU7 727 aaKnown RBP36.81■■■■□ 3.48
CTDNEP1-206ENST00000571409 RIOK1Q9BRS2 568 aaKnown RBP36.81■■■■□ 3.48
CTDNEP1-206ENST00000571409 TBC1D2Q9BYX2 928 aa36.81■■■■□ 3.48
CTDNEP1-206ENST00000571409 PAG1Q9NWQ8 432 aa36.8■■■■□ 3.48
CTDNEP1-206ENST00000571409 SLC45A1Q9Y2W3 748 aa36.8■■■■□ 3.48
CTDNEP1-206ENST00000571409 MAGEB6P1A0A0J9YX57 407 aa36.79■■■■□ 3.48
CTDNEP1-206ENST00000571409 ECM2O94769 699 aaPredicted RBP36.79■■■■□ 3.48
CTDNEP1-206ENST00000571409 RRP1P56182 461 aaKnown RBP36.79■■■■□ 3.48
CTDNEP1-206ENST00000571409 ZNF532Q9HCE3 1301 aa36.79■■■■□ 3.48
CTDNEP1-206ENST00000571409 HTTP42858 3142 aa36.79■■■■□ 3.48
CTDNEP1-206ENST00000571409 AS3MTQ9HBK9 375 aa36.78■■■■□ 3.48
CTDNEP1-206ENST00000571409 AGTPBP1Q9UPW5 1226 aa36.78■■■■□ 3.48
CTDNEP1-206ENST00000571409 PTCH2Q9Y6C5 1203 aa36.78■■■■□ 3.48
CTDNEP1-206ENST00000571409 HAUS7Q99871 368 aa36.77■■■■□ 3.48
CTDNEP1-206ENST00000571409 DCTPP1Q9H773 170 aa36.77■■■■□ 3.48
CTDNEP1-206ENST00000571409 LOC285556D6RIA3 1793 aa36.76■■■■□ 3.48
CTDNEP1-206ENST00000571409 TCRBV5S4A2TA0A5A2 114 aa36.76■■■■□ 3.48
CTDNEP1-206ENST00000571409 ASNSP08243 561 aa36.76■■■■□ 3.48
CTDNEP1-206ENST00000571409 PROCA1Q8NCQ7 364 aaPredicted RBP36.76■■■■□ 3.48
CTDNEP1-206ENST00000571409 GDF11O95390 407 aa36.75■■■■□ 3.47
CTDNEP1-206ENST00000571409 GNRH1P01148 92 aa36.75■■■■□ 3.47
CTDNEP1-206ENST00000571409 BCRP11274 1271 aa36.75■■■■□ 3.47
CTDNEP1-206ENST00000571409 CTGFP29279 349 aa36.75■■■■□ 3.47
CTDNEP1-206ENST00000571409 JAG1P78504 1218 aa36.75■■■■□ 3.47
CTDNEP1-206ENST00000571409 TREML2Q5T2D2 321 aa36.75■■■■□ 3.47
CTDNEP1-206ENST00000571409 DDX60LQ5H9U9 1706 aaKnown RBP36.74■■■■□ 3.47
CTDNEP1-206ENST00000571409 NAV1Q8NEY1 1877 aa36.74■■■■□ 3.47
CTDNEP1-206ENST00000571409 PSMC4P43686 418 aa36.74■■■■□ 3.47
CTDNEP1-206ENST00000571409 HMGCS2P54868 508 aa36.74■■■■□ 3.47
CTDNEP1-206ENST00000571409 SHROOM1Q2M3G4 852 aaPredicted RBP36.74■■■■□ 3.47
CTDNEP1-206ENST00000571409 ARMC5Q96C12 935 aa36.74■■■■□ 3.47
CTDNEP1-206ENST00000571409 CRNKL1Q9BZJ0 848 aaKnown RBP36.74■■■■□ 3.47
CTDNEP1-206ENST00000571409 TTC6Q86TZ1 520 aa36.73■■■■□ 3.47
CTDNEP1-206ENST00000571409 SMCR8Q8TEV9 937 aaPredicted RBP36.72■■■■□ 3.47
CTDNEP1-206ENST00000571409 TRIM47Q96LD4 638 aa36.72■■■■□ 3.47
CTDNEP1-206ENST00000571409 WDR18Q9BV38 432 aa36.72■■■■□ 3.47
CTDNEP1-206ENST00000571409 EHD4Q9H223 541 aa36.72■■■■□ 3.47
CTDNEP1-206ENST00000571409 GINM1Q9NU53 330 aa36.72■■■■□ 3.47
CTDNEP1-206ENST00000571409 SERPINB13Q9UIV8 391 aa36.72■■■■□ 3.47
CTDNEP1-206ENST00000571409 ZBTB21Q9ULJ3 1066 aa36.72■■■■□ 3.47
CTDNEP1-206ENST00000571409 FMNL1O95466 1100 aaPredicted RBP36.71■■■■□ 3.47
CTDNEP1-206ENST00000571409 ADD2P35612 726 aa36.71■■■■□ 3.47
CTDNEP1-206ENST00000571409 SLC9C1Q4G0N8 1177 aa36.71■■■■□ 3.47
CTDNEP1-206ENST00000571409 SH3D19Q5HYK7 790 aa36.71■■■■□ 3.47
CTDNEP1-206ENST00000571409 DDX24Q9GZR7 859 aaKnown RBP eCLIP36.71■■■■□ 3.474e-6■□□□□ 11.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms