RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 ZNHIT6Q9NWK9 470 aaKnown RBP11.3□□□□□ -0.6
USP43-203ENST00000570827 UBR1Q8IWV7 1749 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 TEX33O43247 280 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 N4BP1O75113 896 aaKnown RBP11.3□□□□□ -0.6
USP43-203ENST00000570827 CASP14P31944 242 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 SETQ01105 290 aaPredicted RBP11.3□□□□□ -0.6
USP43-203ENST00000570827 E2F4Q16254 413 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 RTN1Q16799 776 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 BRMS1Q9HCU9 246 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 SETD1AO15047 1707 aaKnown RBP11.3□□□□□ -0.6
USP43-203ENST00000570827 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
USP43-203ENST00000570827 USP42Q9H9J4 1324 aaKnown RBP11.3□□□□□ -0.6
USP43-203ENST00000570827 MACROD2A1Z1Q3 448 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 PRDM1O75626 825 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 PDE4BQ07343 736 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 RBL2Q08999 1139 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 NCAPH2Q6IBW4 605 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 MFSD6Q6ZSS7 791 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 PARP3Q9Y6F1 533 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 SASH3O75995 380 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 KRT9P35527 623 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 UBXN1Q04323 297 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 SHC4Q6S5L8 630 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 FEZ2Q9UHY8 353 aaPredicted RBP11.29□□□□□ -0.6
USP43-203ENST00000570827 ITSN1Q15811 1721 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 MED23Q9ULK4 1368 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 MROH7-TTC4A0A0A0MT08 1334 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 ZEB2O60315 1214 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 PRR29P0C7W0 189 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 PHKG2P15735 406 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 WTAPQ15007 396 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 RABGGTAQ92696 567 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 DLG5Q8TDM6 1919 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 IVLP07476 585 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 ILDR1Q86SU0 546 aaPredicted RBP11.29□□□□□ -0.6
USP43-203ENST00000570827 WASF1Q92558 559 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 KCNB2Q92953 911 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 NAPGQ99747 312 aaPredicted RBP11.29□□□□□ -0.6
USP43-203ENST00000570827 NACAP1Q9BZK3 213 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 L2HGDHQ9H9P8 463 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 MAN1B1Q9UKM7 699 aa11.29□□□□□ -0.6
USP43-203ENST00000570827 CUTAO60888 179 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 TBC1D8O95759 1140 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 CDC25AP30304 524 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 SF3A3Q12874 501 aaKnown RBP eCLIP11.28□□□□□ -0.6
USP43-203ENST00000570827 RNF187Q5TA31 235 aaPredicted RBP11.28□□□□□ -0.6
USP43-203ENST00000570827 C19orf44Q9H6X5 657 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 FAM204AQ9H8W3 233 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 LCMT1Q9UIC8 334 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 FAM170AA1A519 330 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 IKBKBO14920 756 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 STX10O60499 249 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 ATP2C2O75185 946 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 ACTN2P35609 894 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 CCDC122Q5T0U0 273 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 SRGAP1Q7Z6B7 1085 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 APPBP2Q92624 585 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 UIMC1Q96RL1 719 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 ARMT1Q9H993 441 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 MRPL44Q9H9J2 332 aaKnown RBP11.28□□□□□ -0.6
USP43-203ENST00000570827 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 VPS54Q9P1Q0 977 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 CEP131Q9UPN4 1083 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 USP31Q70CQ4 1352 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
USP43-203ENST00000570827 REXO1L1PQ8IX06 675 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 GSPT2Q8IYD1 628 aaKnown RBP11.28□□□□□ -0.6
USP43-203ENST00000570827 MAGEB6Q8N7X4 407 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 POLD4Q9HCU8 107 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 WWC3Q9ULE0 1092 aa11.28□□□□□ -0.6
USP43-203ENST00000570827 SYNRGQ9UMZ2 1314 aa11.27□□□□□ -0.6
USP43-203ENST00000570827 TRIM75PA6NK02 468 aa11.27□□□□□ -0.6
USP43-203ENST00000570827 MARCH6O60337 910 aa11.27□□□□□ -0.6
USP43-203ENST00000570827 MBD4O95243 580 aa11.27□□□□□ -0.6
USP43-203ENST00000570827 TRIM21P19474 475 aaKnown RBP11.27□□□□□ -0.6
USP43-203ENST00000570827 LIG3P49916 1009 aa11.27□□□□□ -0.6
USP43-203ENST00000570827 RNASE9P60153 205 aaKnown RBP11.27□□□□□ -0.6
USP43-203ENST00000570827 GRIN1Q05586 938 aa11.27□□□□□ -0.6
USP43-203ENST00000570827 FMR1Q06787 632 aaKnown RBP eCLIP11.27□□□□□ -0.6
USP43-203ENST00000570827 SCARF1Q14162 830 aa11.27□□□□□ -0.6
USP43-203ENST00000570827 A0A0U1RQJ8 604 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 POTEB2H3BUK9 544 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 KIAA0754O94854 1291 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 MCM7P33993 719 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 EXOSC10Q01780 885 aaKnown RBP11.27□□□□□ -0.61
USP43-203ENST00000570827 USPL1Q5W0Q7 1092 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 USP49Q70CQ1 688 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 METTL16Q86W50 562 aaKnown RBP11.27□□□□□ -0.61
USP43-203ENST00000570827 MLKLQ8NB16 471 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 GOLGA5Q8TBA6 731 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 ATRIPQ8WXE1 791 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 BTG4Q9NY30 223 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.61
USP43-203ENST00000570827 SRGAP2O75044 1071 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
USP43-203ENST00000570827 CDC27P30260 824 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 NCAPHQ15003 741 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 TSGA10IPQ3SY00 556 aa11.27□□□□□ -0.61
USP43-203ENST00000570827 CDC23Q9UJX2 597 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms