RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 CDK5RAP2Q96SN8 1893 aa27.53■■■□□ 2
SLC12A4-205ENST00000570616 CTNND1O60716 968 aaKnown RBP27.52■■■□□ 2
SLC12A4-205ENST00000570616 HSPA8P11142 646 aaKnown RBP27.52■■■□□ 2
SLC12A4-205ENST00000570616 FOXP4Q8IVH2 680 aaPredicted RBP27.52■■■□□ 2
SLC12A4-205ENST00000570616 SCYL3Q8IZE3 742 aa27.52■■■□□ 2
SLC12A4-205ENST00000570616 FSD1Q9BTV5 496 aa27.52■■■□□ 2
SLC12A4-205ENST00000570616 PUS7LQ9H0K6 701 aaKnown RBP27.52■■■□□ 2
SLC12A4-205ENST00000570616 FAM196BA6NMK8 535 aa27.51■■□□□ 1.99
SLC12A4-205ENST00000570616 PPATQ06203 517 aa27.51■■□□□ 1.99
SLC12A4-205ENST00000570616 PPIL2Q13356 520 aa27.51■■□□□ 1.99
SLC12A4-205ENST00000570616 PLEKHM2Q8IWE5 1019 aa27.51■■□□□ 1.99
SLC12A4-205ENST00000570616 OSBPL3Q9H4L5 887 aa27.51■■□□□ 1.99
SLC12A4-205ENST00000570616 RNF186Q9NXI6 227 aa27.51■■□□□ 1.99
SLC12A4-205ENST00000570616 SDR42E1Q8WUS8 393 aa27.5■■□□□ 1.99
SLC12A4-205ENST00000570616 EVI5LQ96CN4 794 aa27.5■■□□□ 1.99
SLC12A4-205ENST00000570616 MS4A4AQ96JQ5 239 aa27.5■■□□□ 1.99
SLC12A4-205ENST00000570616 EHD4Q9H223 541 aa27.5■■□□□ 1.99
SLC12A4-205ENST00000570616 PICK1Q9NRD5 415 aa27.5■■□□□ 1.99
SLC12A4-205ENST00000570616 LAMB1P07942 1786 aa27.5■■□□□ 1.99
SLC12A4-205ENST00000570616 MYH7P12883 1935 aa27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 TESPA1A2RU30 521 aaPredicted RBP27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 GTF2A2P52657 109 aa27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 TTC6Q86TZ1 520 aa27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 CRACR2BQ8N4Y2 399 aaPredicted RBP27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 OSBP2Q969R2 916 aa27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 TRIM34Q9BYJ4 488 aa27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 DNAJC18Q9H819 358 aa27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 DCP1AQ9NPI6 582 aaPredicted RBP27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 ATP8A2Q9NTI2 1148 aa27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 DDX60LQ5H9U9 1706 aaKnown RBP27.49■■□□□ 1.99
SLC12A4-205ENST00000570616 IRF6O14896 467 aa27.48■■□□□ 1.99
SLC12A4-205ENST00000570616 SIPA1L1O43166 1804 aa27.48■■□□□ 1.99
SLC12A4-205ENST00000570616 PRKAB2O43741 272 aa27.47■■□□□ 1.99
SLC12A4-205ENST00000570616 TRPA1O75762 1119 aa27.47■■□□□ 1.99
SLC12A4-205ENST00000570616 LBX1P52954 281 aa27.47■■□□□ 1.99
SLC12A4-205ENST00000570616 SLC4A8Q2Y0W8 1093 aa27.47■■□□□ 1.99
SLC12A4-205ENST00000570616 IFNL1Q8IU54 200 aa27.47■■□□□ 1.99
SLC12A4-205ENST00000570616 PRDM10Q9NQV6 1147 aa27.47■■□□□ 1.99
SLC12A4-205ENST00000570616 MCM9Q9NXL9 1143 aa27.47■■□□□ 1.99
SLC12A4-205ENST00000570616 TSKSQ9UJT2 592 aa27.47■■□□□ 1.99
SLC12A4-205ENST00000570616 PTPRAP18433 802 aa27.46■■□□□ 1.99
SLC12A4-205ENST00000570616 CAP2P40123 477 aa27.46■■□□□ 1.99
SLC12A4-205ENST00000570616 SNAPC2Q13487 334 aa27.46■■□□□ 1.99
SLC12A4-205ENST00000570616 STRBPQ96SI9 672 aaKnown RBP27.46■■□□□ 1.99
SLC12A4-205ENST00000570616 SERPINB13Q9UIV8 391 aa27.46■■□□□ 1.99
SLC12A4-205ENST00000570616 KCNH4Q9UQ05 1017 aa27.46■■□□□ 1.99
SLC12A4-205ENST00000570616 ALDH1A1P00352 501 aa27.45■■□□□ 1.98
SLC12A4-205ENST00000570616 POLR3DP05423 398 aaPredicted RBP27.45■■□□□ 1.98
SLC12A4-205ENST00000570616 TICAM2Q86XR7 235 aa27.45■■□□□ 1.98
SLC12A4-205ENST00000570616 SLC4A4Q9Y6R1 1079 aa27.45■■□□□ 1.98
SLC12A4-205ENST00000570616 CCL15-CCL14A0A0B4J2E2 113 aa27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 IGF2BP3O00425 579 aaKnown RBP eCLIP27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 GPAA1O43292 621 aa27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 CETPP11597 493 aa27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 RRP1BQ14684 758 aaKnown RBP27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 CCL15Q16663 113 aa27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 ZMYM1Q5SVZ6 1142 aa27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 BRI3BPQ8WY22 251 aa27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 DDRGK1Q96HY6 314 aa27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 CFHR5Q9BXR6 569 aa27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 NAV1Q8NEY1 1877 aa27.44■■□□□ 1.98
SLC12A4-205ENST00000570616 DOCK1Q14185 1865 aa27.43■■□□□ 1.98
SLC12A4-205ENST00000570616 M0R2C6 588 aa27.43■■□□□ 1.98
SLC12A4-205ENST00000570616 PLCD1P51178 756 aa27.43■■□□□ 1.98
SLC12A4-205ENST00000570616 OTUD7BQ6GQQ9 843 aa27.43■■□□□ 1.98
SLC12A4-205ENST00000570616 PTPN18Q99952 460 aa27.43■■□□□ 1.98
SLC12A4-205ENST00000570616 TAOK2Q9UL54 1235 aa27.43■■□□□ 1.98
SLC12A4-205ENST00000570616 ZHX2Q9Y6X8 837 aa27.43■■□□□ 1.98
SLC12A4-205ENST00000570616 PDE4AP27815 886 aa27.42■■□□□ 1.98
SLC12A4-205ENST00000570616 TRIM6-TRIM34B2RNG4 842 aa27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 CXCL11O14625 94 aa27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 CENPBP07199 599 aaPredicted RBP27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 GNAT2P19087 354 aa27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 GABPAQ06546 454 aa27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 TATDN1Q6P1N9 297 aa27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 GIMAP6Q6P9H5 292 aa27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 TBC1D2Q9BYX2 928 aa27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 GINM1Q9NU53 330 aa27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 AFG3L2Q9Y4W6 797 aa27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 MYH1P12882 1939 aa27.41■■□□□ 1.98
SLC12A4-205ENST00000570616 AMOTL1Q8IY63 956 aa27.4■■□□□ 1.98
SLC12A4-205ENST00000570616 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.4■■□□□ 1.98
SLC12A4-205ENST00000570616 GSG1L2A8MUP6 293 aa27.39■■□□□ 1.98
SLC12A4-205ENST00000570616 ASNSP08243 561 aa27.39■■□□□ 1.98
SLC12A4-205ENST00000570616 CYP2D6P10635 497 aa27.39■■□□□ 1.98
SLC12A4-205ENST00000570616 SEC62Q99442 399 aaKnown RBP27.39■■□□□ 1.98
SLC12A4-205ENST00000570616 ZCCHC17Q9NP64 241 aaKnown RBP27.39■■□□□ 1.98
SLC12A4-205ENST00000570616 ARPP21Q9UBL0 812 aaPredicted RBP27.39■■□□□ 1.98
SLC12A4-205ENST00000570616 USP17L12C9JPN9 530 aa27.38■■□□□ 1.97
SLC12A4-205ENST00000570616 USP17L21D6R901 530 aa27.38■■□□□ 1.97
SLC12A4-205ENST00000570616 TBC1D8O95759 1140 aa27.38■■□□□ 1.97
SLC12A4-205ENST00000570616 EVX2Q03828 476 aa27.38■■□□□ 1.97
SLC12A4-205ENST00000570616 C12orf60Q5U649 245 aa27.38■■□□□ 1.97
SLC12A4-205ENST00000570616 A0A0G2JLL6 359 aaPredicted RBP27.37■■□□□ 1.97
SLC12A4-205ENST00000570616 USP17L5A8MUK1 530 aa27.37■■□□□ 1.97
SLC12A4-205ENST00000570616 GDF11O95390 407 aa27.37■■□□□ 1.97
SLC12A4-205ENST00000570616 NEFLP07196 543 aa27.37■■□□□ 1.97
SLC12A4-205ENST00000570616 SHMT1P34896 483 aa27.37■■□□□ 1.97
SLC12A4-205ENST00000570616 NOM1Q5C9Z4 860 aaKnown RBP27.37■■□□□ 1.97
SLC12A4-205ENST00000570616 COL13A1Q5TAT6 717 aaPredicted RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms