RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ATRNL1Q5VV63 1379 aa18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 ST18O60284 1047 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 PDE4BQ07343 736 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 RUFY3Q7L099 469 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 FAM83AQ86UY5 434 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 MB21D2Q8IYB1 491 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 FAM151AQ8WW52 585 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 KRT23Q9C075 422 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 INCENPQ9NQS7 918 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 GGA3Q9NZ52 723 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 WDR90Q96KV7 1748 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 IQCA1LA6NCM1 817 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 DDTLA6NHG4 134 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 B4E1Z4 1266 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 PRDM1O75626 825 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 PCP11498 1178 aaKnown RBP18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 EPHX2P34913 555 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 HIRAP54198 1017 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 COL9A3Q14050 684 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 ANGEL2Q5VTE6 544 aaKnown RBP18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 C16orf86Q6ZW13 317 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 SH3BP5LQ7L8J4 393 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 APOBEC3FQ8IUX4 373 aaKnown RBP18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 PDRG1Q9NUG6 133 aa18.23■□□□□ 0.51
HERPUD1-219ENST00000570273 ORC4O43929 436 aa18.22■□□□□ 0.51
HERPUD1-219ENST00000570273 SLC44A5Q8NCS7 719 aa18.22■□□□□ 0.51
HERPUD1-219ENST00000570273 TCEANC2Q96MN5 208 aa18.22■□□□□ 0.51
HERPUD1-219ENST00000570273 TRIM34Q9BYJ4 488 aa18.22■□□□□ 0.51
HERPUD1-219ENST00000570273 TMEM39BQ9GZU3 492 aa18.22■□□□□ 0.51
HERPUD1-219ENST00000570273 ZNF287Q9HBT7 754 aa18.22■□□□□ 0.51
HERPUD1-219ENST00000570273 KDM4AO75164 1064 aa18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 FGRP09769 529 aa18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 MCM5P33992 734 aa18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 RASA3Q14644 834 aa18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 USP50Q70EL3 339 aaPredicted RBP18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 DHX32Q7L7V1 743 aaKnown RBP18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 CRACR2BQ8N4Y2 399 aaPredicted RBP18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 ESR2Q92731 530 aa18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 CSRNP1Q96S65 589 aa18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 EHD4Q9H223 541 aa18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 MKNK2Q9HBH9 465 aa18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 PI4KBQ9UBF8 816 aa18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 SERPINB13Q9UIV8 391 aa18.21■□□□□ 0.51
HERPUD1-219ENST00000570273 PRC1O43663 620 aa18.2■□□□□ 0.5
HERPUD1-219ENST00000570273 RANBP6O60518 1105 aaKnown RBP18.2■□□□□ 0.5
HERPUD1-219ENST00000570273 CDK8P49336 464 aa18.2■□□□□ 0.5
HERPUD1-219ENST00000570273 CHST3Q7LGC8 479 aa18.2■□□□□ 0.5
HERPUD1-219ENST00000570273 HSCBQ8IWL3 235 aa18.2■□□□□ 0.5
HERPUD1-219ENST00000570273 IL27Q8NEV9 243 aa18.2■□□□□ 0.5
HERPUD1-219ENST00000570273 TTC14Q96N46 770 aa18.2■□□□□ 0.5
HERPUD1-219ENST00000570273 SWAP70Q9UH65 585 aa18.2■□□□□ 0.5
HERPUD1-219ENST00000570273 SCAF8Q9UPN6 1271 aaKnown RBP18.2■□□□□ 0.5
HERPUD1-219ENST00000570273 ANTXR2P58335 489 aa18.19■□□□□ 0.5
HERPUD1-219ENST00000570273 FGD1P98174 961 aa18.19■□□□□ 0.5
HERPUD1-219ENST00000570273 GABPAQ06546 454 aa18.19■□□□□ 0.5
HERPUD1-219ENST00000570273 CYB5R4Q7L1T6 521 aa18.19■□□□□ 0.5
HERPUD1-219ENST00000570273 NKX2-3Q8TAU0 364 aa18.19■□□□□ 0.5
HERPUD1-219ENST00000570273 LRRC2Q9BYS8 371 aa18.19■□□□□ 0.5
HERPUD1-219ENST00000570273 TAF1DQ9H5J8 278 aaPredicted RBP18.19■□□□□ 0.5
HERPUD1-219ENST00000570273 SCN4AP35499 1836 aa18.18■□□□□ 0.5
HERPUD1-219ENST00000570273 WDR19Q8NEZ3 1342 aa18.18■□□□□ 0.5
HERPUD1-219ENST00000570273 PITPNM2Q9BZ72 1349 aa18.18■□□□□ 0.5
HERPUD1-219ENST00000570273 CD2BP2O95400 341 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-219ENST00000570273 EXOSC10Q01780 885 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-219ENST00000570273 EAPPQ56P03 285 aaPredicted RBP18.18■□□□□ 0.5
HERPUD1-219ENST00000570273 NOL8Q76FK4 1167 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-219ENST00000570273 SNX21Q969T3 373 aa18.18■□□□□ 0.5
HERPUD1-219ENST00000570273 DEFB129Q9H1M3 183 aa18.18■□□□□ 0.5
HERPUD1-219ENST00000570273 TSPY2A6NKD2 308 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 FAM196BA6NMK8 535 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 RASA1P20936 1047 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 NT5C2P49902 561 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 AK2P54819 239 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 BECN1Q14457 450 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 FAM47AQ5JRC9 791 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 Q6ZUG5 572 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 FOXP4Q8IVH2 680 aaPredicted RBP18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 CDAN1Q8IWY9 1227 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 ZNF444Q8N0Y2 327 aaPredicted RBP18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 DCPSQ96C86 337 aaKnown RBP18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 TAOK2Q9UL54 1235 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 SIPA1L1O43166 1804 aa18.17■□□□□ 0.5
HERPUD1-219ENST00000570273 POTECB2RU33 542 aa18.16■□□□□ 0.5
HERPUD1-219ENST00000570273 SLURP2P0DP57 97 aa18.16■□□□□ 0.5
HERPUD1-219ENST00000570273 SHMT1P34896 483 aa18.16■□□□□ 0.5
HERPUD1-219ENST00000570273 MCM2P49736 904 aa18.16■□□□□ 0.5
HERPUD1-219ENST00000570273 ANKRD1Q15327 319 aa18.16■□□□□ 0.5
HERPUD1-219ENST00000570273 UBAC1Q9BSL1 405 aa18.16■□□□□ 0.5
HERPUD1-219ENST00000570273 DNAJC18Q9H819 358 aa18.16■□□□□ 0.5
HERPUD1-219ENST00000570273 ZSWIM5Q9P217 1185 aa18.16■□□□□ 0.5
HERPUD1-219ENST00000570273 PPP2R3BQ9Y5P8 575 aa18.16■□□□□ 0.5
HERPUD1-219ENST00000570273 TSPY3P0CV98 308 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 TSPY8P0CW00 308 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 SART3Q15020 963 aaKnown RBP18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 PNMA8AQ86V59 439 aaPredicted RBP18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 SULF1Q8IWU6 871 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 TEPSINQ96N21 525 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 TBC1D2Q9BYX2 928 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 ALDH8A1Q9H2A2 487 aaPredicted RBP18.15■□□□□ 0.5
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