RNA–Protein interactions for RNA: ENST00000569862.5

CENPT-233, Transcript of centromere protein T, human

TSL 2

Gene CENPT, Length 2,957 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CENPT-233	ENST00000569862	SHOX2	O60902	331 aa	Predicted RBP	15.2	■□□□□ 0.02
CENPT-233	ENST00000569862	LIG3	P49916	1009 aa		15.2	■□□□□ 0.02
CENPT-233	ENST00000569862	ANTXR2	P58335	489 aa		15.2	■□□□□ 0.02
CENPT-233	ENST00000569862	HAND2	P61296	217 aa		15.2	■□□□□ 0.02
CENPT-233	ENST00000569862	AMPD2	Q01433	879 aa		15.2	■□□□□ 0.02
CENPT-233	ENST00000569862	RIC3	Q7Z5B4	369 aa		15.2	■□□□□ 0.02
CENPT-233	ENST00000569862	DDX60	Q8IY21	1712 aa	Known RBP	15.2	■□□□□ 0.02
CENPT-233	ENST00000569862	FOXP2	O15409	715 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	ERLIN2	O94905	339 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	TUBB	P07437	444 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	MORC3	Q14149	939 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	NT5DC1	Q5TFE4	455 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	KCNV1	Q6PIU1	500 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	CXorf56	Q9H5V9	222 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	SEC31B	Q9NQW1	1179 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	DDX21	Q9NR30	783 aa	Known RBP eCLIP	15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	PBX1	P40424	430 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	SARS	P49591	514 aa	Known RBP	15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	POSTN	Q15063	836 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	AKAP4	Q5JQC9	854 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	ZNF530	Q6P9A1	599 aa	Predicted RBP	15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	MB21D2	Q8IYB1	491 aa	Predicted RBP	15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	MLKL	Q8NB16	471 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	CTCFL	Q8NI51	663 aa	Predicted RBP	15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	TAOK2	Q9UL54	1235 aa		15.19	■□□□□ 0.02
CENPT-233	ENST00000569862	MFAP3L	O75121	409 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	ARHGAP25	P42331	645 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	GRAMD1C	Q8IYS0	662 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	RNMT	O43148	476 aa	Known RBP	15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	HNRNPH1	P31943	449 aa	Known RBP	15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	KRT40	Q6A162	431 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	PPFIBP1	Q86W92	1011 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	ELOA2	Q8IYF1	753 aa	Predicted RBP	15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	CCT5	P48643	541 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	TTC39A	Q5SRH9	613 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	FBXW10	Q5XX13	1052 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	MYD88	Q99836	296 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	ALG1	Q9BT22	464 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	KAT14	Q9H8E8	782 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	HOOK1	Q9UJC3	728 aa	Known RBP	15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	MYO6	Q9UM54	1294 aa		15.18	■□□□□ 0.02
CENPT-233	ENST00000569862	CASP14	P31944	242 aa		15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	GRIN1	Q05586	938 aa		15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	RNF216	Q9NWF9	866 aa	Predicted RBP	15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	TTF2	Q9UNY4	1162 aa	Known RBP	15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	FAM169A	Q9Y6X4	670 aa		15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	RNF113A	O15541	343 aa	Known RBP	15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	GGCX	P38435	758 aa		15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	FXR1	P51114	621 aa	Known RBP eCLIP	15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	USP14	P54578	494 aa		15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	AKAP17A	Q02040	695 aa	Known RBP	15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	SMARCC1	Q92922	1105 aa	Predicted RBP	15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	FAM107B	Q9H098	131 aa		15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	PXDN	Q92626	1479 aa		15.17	■□□□□ 0.02
CENPT-233	ENST00000569862	AGPS	O00116	658 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	FECH	P22830	423 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	PLCD1	P51178	756 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	ERVK-24	P63145	666 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	STK11IP	Q8N1F8	1099 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	OSBP2	Q969R2	916 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	GDAP1L1	Q96MZ0	367 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	EHD4	Q9H223	541 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	SERTAD1	Q9UHV2	236 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	GYPC	P04921	128 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	CCDC148	Q8NFR7	591 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	COG1	Q8WTW3	980 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	DACH1	Q9UI36	760 aa		15.16	■□□□□ 0.02
CENPT-233	ENST00000569862	CCDC172	P0C7W6	258 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	IRAK1	P51617	712 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	NEXN	Q0ZGT2	675 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	RABL6	Q3YEC7	729 aa	Predicted RBP	15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	ADD3	Q9UEY8	706 aa	Known RBP	15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	ECM29	Q5VYK3	1845 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	POLR2D	O15514	142 aa	Known RBP	15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	STIM1	Q13586	685 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	KRI1	Q8N9T8	703 aa	Known RBP	15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	NEUROD6	Q96NK8	337 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	LTN1	O94822	1766 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	RGPD2	P0DJD1	1756 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	MYL6B	P14649	208 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	MAP2K2	P36507	400 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	METTL22	Q9BUU2	404 aa	Predicted RBP	15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	NBPF3	Q9H094	633 aa		15.15	■□□□□ 0.02
CENPT-233	ENST00000569862	MYH8	P13535	1937 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	MNAT1	P51948	309 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	TIMM10	P62072	90 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	ANKRD20A12P	Q8NF67	263 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	NKX2-3	Q8TAU0	364 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	PHKB	Q93100	1093 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	CEP83	Q9Y592	693 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	ZNF142	P52746	1687 aa	Predicted RBP	15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	RNF225	M0QZC1	329 aa	Predicted RBP	15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	MYBL2	P10244	700 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	RXRA	P19793	462 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	ERCC5	P28715	1186 aa	Predicted RBP	15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	TRAPPC11	Q7Z392	1133 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	UBE3B	Q7Z3V4	1068 aa		15.14	■□□□□ 0.01
CENPT-233	ENST00000569862	GSPT2	Q8IYD1	628 aa	Known RBP	15.14	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms