RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 TRPM7Q96QT4 1865 aa19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 RASSF10A6NK89 507 aa19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 HIP1O00291 1037 aa19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 GNAT2P19087 354 aa19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 ARMC9Q7Z3E5 817 aa19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 FOXP4Q8IVH2 680 aaPredicted RBP19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 CCDC171Q6TFL3 1326 aa19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 FGAP02671 866 aa19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 POLR3DP05423 398 aaPredicted RBP19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 DEFB115Q30KQ5 88 aa19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 WRNIP1Q96S55 665 aa19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.94■□□□□ 0.78
CNEP1R1-210ENST00000568890 MAP3K9P80192 1104 aa19.93■□□□□ 0.78
CNEP1R1-210ENST00000568890 CYP4F22Q6NT55 531 aa19.93■□□□□ 0.78
CNEP1R1-210ENST00000568890 GIMAP6Q6P9H5 292 aa19.93■□□□□ 0.78
CNEP1R1-210ENST00000568890 SLC44A5Q8NCS7 719 aa19.93■□□□□ 0.78
CNEP1R1-210ENST00000568890 CNKSR2Q8WXI2 1034 aa19.93■□□□□ 0.78
CNEP1R1-210ENST00000568890 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.93■□□□□ 0.78
CNEP1R1-210ENST00000568890 SGSM2O43147 1006 aa19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 VGLL4Q14135 290 aa19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 DCAF15Q66K64 600 aa19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 TTC6Q86TZ1 520 aa19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 ZIC5Q96T25 663 aa19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 ZNF341Q9BYN7 854 aa19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 SERPINB13Q9UIV8 391 aa19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 FOCADQ5VW36 1801 aa19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 IREB2P48200 963 aaKnown RBP19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 SBK1Q52WX2 424 aa19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 TACC3Q9Y6A5 838 aa19.92■□□□□ 0.78
CNEP1R1-210ENST00000568890 SIPA1L1O43166 1804 aa19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 FAM155AB1AL88 458 aaPredicted RBP19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 PTH1RQ03431 593 aa19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 RGMBQ6NW40 437 aa19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 STK11IPQ8N1F8 1099 aa19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 HOOK2Q96ED9 719 aa19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 EHD4Q9H223 541 aa19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 INCENPQ9NQS7 918 aa19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 HERC5Q9UII4 1024 aaKnown RBP19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 SNCAIPQ9Y6H5 919 aa19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 AK9Q5TCS8 1911 aa19.91■□□□□ 0.78
CNEP1R1-210ENST00000568890 MINDY4BA8MYZ0 360 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 HLA-DOAP06340 250 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 SHMT1P34896 483 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 GJA5P36382 358 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 VEGFBP49765 207 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 ZNF157P51786 506 aaPredicted RBP19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 ANKRD13AQ8IZ07 590 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 HHIPL1Q96JK4 782 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 PAPPA2Q9BXP8 1791 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 TDO2P48775 406 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 ALX1Q15699 326 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 TATDN1Q6P1N9 297 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 ELP3Q9H9T3 547 aa19.9■□□□□ 0.78
CNEP1R1-210ENST00000568890 BAZ2AQ9UIF9 1905 aaKnown RBP19.89■□□□□ 0.77
CNEP1R1-210ENST00000568890 CCDC84Q86UT8 332 aaPredicted RBP19.89■□□□□ 0.77
CNEP1R1-210ENST00000568890 CRACR2BQ8N4Y2 399 aaPredicted RBP19.89■□□□□ 0.77
CNEP1R1-210ENST00000568890 SLC10A4Q96EP9 437 aa19.89■□□□□ 0.77
CNEP1R1-210ENST00000568890 ESYT1Q9BSJ8 1104 aa19.89■□□□□ 0.77
CNEP1R1-210ENST00000568890 NAPBQ9H115 298 aa19.89■□□□□ 0.77
CNEP1R1-210ENST00000568890 DDX60LQ5H9U9 1706 aaKnown RBP19.89■□□□□ 0.77
CNEP1R1-210ENST00000568890 GRM1Q13255 1194 aa19.88■□□□□ 0.77
CNEP1R1-210ENST00000568890 ARPP21Q9UBL0 812 aaPredicted RBP19.88■□□□□ 0.77
CNEP1R1-210ENST00000568890 CAP2P40123 477 aa19.88■□□□□ 0.77
CNEP1R1-210ENST00000568890 RASAL3Q86YV0 1011 aa19.88■□□□□ 0.77
CNEP1R1-210ENST00000568890 DDRGK1Q96HY6 314 aa19.88■□□□□ 0.77
CNEP1R1-210ENST00000568890 NACAP1Q9BZK3 213 aa19.88■□□□□ 0.77
CNEP1R1-210ENST00000568890 NBPF3Q9H094 633 aa19.88■□□□□ 0.77
CNEP1R1-210ENST00000568890 MYH1P12882 1939 aa19.87■□□□□ 0.77
CNEP1R1-210ENST00000568890 CTNND1O60716 968 aaKnown RBP19.87■□□□□ 0.77
CNEP1R1-210ENST00000568890 AOC2O75106 756 aa19.87■□□□□ 0.77
CNEP1R1-210ENST00000568890 CDK8P49336 464 aa19.87■□□□□ 0.77
CNEP1R1-210ENST00000568890 MKRN3Q13064 507 aaKnown RBP19.87■□□□□ 0.77
CNEP1R1-210ENST00000568890 NKX2-3Q8TAU0 364 aa19.87■□□□□ 0.77
CNEP1R1-210ENST00000568890 CAPNS2Q96L46 248 aa19.87■□□□□ 0.77
CNEP1R1-210ENST00000568890 GDF11O95390 407 aa19.86■□□□□ 0.77
CNEP1R1-210ENST00000568890 CTDSPL2Q05D32 466 aa19.86■□□□□ 0.77
CNEP1R1-210ENST00000568890 PPARAQ07869 468 aa19.86■□□□□ 0.77
CNEP1R1-210ENST00000568890 C16orf86Q6ZW13 317 aa19.86■□□□□ 0.77
CNEP1R1-210ENST00000568890 PAXIP1Q6ZW49 1069 aaPredicted RBP19.86■□□□□ 0.77
CNEP1R1-210ENST00000568890 RUFY2Q8WXA3 655 aa19.86■□□□□ 0.77
CNEP1R1-210ENST00000568890 DSCC1Q9BVC3 393 aa19.86■□□□□ 0.77
CNEP1R1-210ENST00000568890 UNCXA6NJT0 531 aa19.86■□□□□ 0.77
CNEP1R1-210ENST00000568890 CDC45O75419 566 aa19.86■□□□□ 0.77
CNEP1R1-210ENST00000568890 RAD50Q92878 1312 aa19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 WDR33Q9C0J8 1336 aaKnown RBP19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 PRDM1O75626 825 aa19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 SLC10A3P09131 477 aa19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 MFAP1P55081 439 aaKnown RBP19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 HAND2P61296 217 aa19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 NOL9Q5SY16 702 aaKnown RBP19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 SPRYD7Q5W111 196 aa19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 SCYL3Q8IZE3 742 aa19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 OPTNQ96CV9 577 aa19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 CSADQ9Y600 493 aa19.85■□□□□ 0.77
CNEP1R1-210ENST00000568890 PTPRAP18433 802 aa19.84■□□□□ 0.77
CNEP1R1-210ENST00000568890 CERKLQ49MI3 558 aaPredicted RBP19.84■□□□□ 0.77
CNEP1R1-210ENST00000568890 LSG1Q9H089 658 aaKnown RBP19.84■□□□□ 0.77
CNEP1R1-210ENST00000568890 TAF6LQ9Y6J9 622 aa19.84■□□□□ 0.77
CNEP1R1-210ENST00000568890 GUCY1A2P33402 732 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms