RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 FLT1P17948 1338 aa17.57■□□□□ 0.4
CMTM3-215ENST00000568477 DYNLL1P63167 89 aaKnown RBP17.57■□□□□ 0.4
CMTM3-215ENST00000568477 TTF1Q15361 905 aaPredicted RBP17.57■□□□□ 0.4
CMTM3-215ENST00000568477 PI4KBQ9UBF8 816 aa17.57■□□□□ 0.4
CMTM3-215ENST00000568477 AFG3L2Q9Y4W6 797 aa17.57■□□□□ 0.4
CMTM3-215ENST00000568477 A0A0G2JLL6 359 aaPredicted RBP17.56■□□□□ 0.4
CMTM3-215ENST00000568477 FASTKD5Q7L8L6 764 aaKnown RBP17.56■□□□□ 0.4
CMTM3-215ENST00000568477 PRRT2Q7Z6L0 340 aaPredicted RBP17.56■□□□□ 0.4
CMTM3-215ENST00000568477 MIGA1Q8NAN2 632 aa17.56■□□□□ 0.4
CMTM3-215ENST00000568477 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.56■□□□□ 0.4
CMTM3-215ENST00000568477 PTPN22Q9Y2R2 807 aa17.56■□□□□ 0.4
CMTM3-215ENST00000568477 CAP2P40123 477 aa17.55■□□□□ 0.4
CMTM3-215ENST00000568477 KIF22Q14807 665 aa17.55■□□□□ 0.4
CMTM3-215ENST00000568477 GADL1Q6ZQY3 521 aa17.55■□□□□ 0.4
CMTM3-215ENST00000568477 PARK7Q99497 189 aaKnown RBP17.55■□□□□ 0.4
CMTM3-215ENST00000568477 DNAJC2Q99543 621 aaKnown RBP17.55■□□□□ 0.4
CMTM3-215ENST00000568477 TRIM34Q9BYJ4 488 aa17.55■□□□□ 0.4
CMTM3-215ENST00000568477 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.55■□□□□ 0.4
CMTM3-215ENST00000568477 TRIM75PA6NK02 468 aa17.54■□□□□ 0.4
CMTM3-215ENST00000568477 LACTBP83111 547 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-215ENST00000568477 CAP1Q01518 475 aa17.54■□□□□ 0.4
CMTM3-215ENST00000568477 GPAT2Q6NUI2 795 aa17.54■□□□□ 0.4
CMTM3-215ENST00000568477 C17orf99Q6UX52 265 aa17.54■□□□□ 0.4
CMTM3-215ENST00000568477 CCDC84Q86UT8 332 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-215ENST00000568477 CRACR2BQ8N4Y2 399 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-215ENST00000568477 LRRCC1Q9C099 1032 aa17.54■□□□□ 0.4
CMTM3-215ENST00000568477 SAP30BPQ9UHR5 308 aaKnown RBP17.54■□□□□ 0.4
CMTM3-215ENST00000568477 CPA4Q9UI42 421 aa17.54■□□□□ 0.4
CMTM3-215ENST00000568477 PALD1Q9ULE6 856 aa17.54■□□□□ 0.4
CMTM3-215ENST00000568477 CDK5RAP2Q96SN8 1893 aa17.54■□□□□ 0.4
CMTM3-215ENST00000568477 ADGRA2Q96PE1 1338 aa17.53■□□□□ 0.4
CMTM3-215ENST00000568477 GOLIM4O00461 696 aa17.53■□□□□ 0.4
CMTM3-215ENST00000568477 HLA-DOAP06340 250 aa17.53■□□□□ 0.4
CMTM3-215ENST00000568477 USP5P45974 858 aa17.53■□□□□ 0.4
CMTM3-215ENST00000568477 FOXP4Q8IVH2 680 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-215ENST00000568477 TBC1D2Q9BYX2 928 aa17.53■□□□□ 0.4
CMTM3-215ENST00000568477 FOCADQ5VW36 1801 aa17.53■□□□□ 0.4
CMTM3-215ENST00000568477 PDE6AP16499 860 aa17.52■□□□□ 0.4
CMTM3-215ENST00000568477 RRP1BQ14684 758 aaKnown RBP17.52■□□□□ 0.4
CMTM3-215ENST00000568477 SLC9C2Q5TAH2 1124 aa17.52■□□□□ 0.4
CMTM3-215ENST00000568477 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.4
CMTM3-215ENST00000568477 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.4
CMTM3-215ENST00000568477 SIPA1L1O43166 1804 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 PHIPQ8WWQ0 1821 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 PTPRFP10586 1907 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 USP17L5A8MUK1 530 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 GNRH1P01148 92 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 CYP2C8P10632 490 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 ATP5JP18859 108 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 SPP2Q13103 211 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 ZNF280CQ8ND82 737 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 ARHGAP39Q9C0H5 1083 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 DNAJC18Q9H819 358 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 AS3MTQ9HBK9 375 aa17.51■□□□□ 0.39
CMTM3-215ENST00000568477 HTTP42858 3142 aa17.5■□□□□ 0.39
CMTM3-215ENST00000568477 MAGEB6P1A0A0J9YX57 407 aa17.5■□□□□ 0.39
CMTM3-215ENST00000568477 ASNSP08243 561 aa17.5■□□□□ 0.39
CMTM3-215ENST00000568477 SLC4A8Q2Y0W8 1093 aa17.5■□□□□ 0.39
CMTM3-215ENST00000568477 ARMC5Q96C12 935 aa17.5■□□□□ 0.39
CMTM3-215ENST00000568477 RIOK1Q9BRS2 568 aaKnown RBP17.5■□□□□ 0.39
CMTM3-215ENST00000568477 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
CMTM3-215ENST00000568477 PAG1Q9NWQ8 432 aa17.5■□□□□ 0.39
CMTM3-215ENST00000568477 AGTPBP1Q9UPW5 1226 aa17.5■□□□□ 0.39
CMTM3-215ENST00000568477 PTCH2Q9Y6C5 1203 aa17.5■□□□□ 0.39
CMTM3-215ENST00000568477 ZNF532Q9HCE3 1301 aa17.49■□□□□ 0.39
CMTM3-215ENST00000568477 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
CMTM3-215ENST00000568477 PDE4DIPQ5VU43 2346 aa17.49■□□□□ 0.39
CMTM3-215ENST00000568477 SMARCA5O60264 1052 aaPredicted RBP17.49■□□□□ 0.39
CMTM3-215ENST00000568477 BCRP11274 1271 aa17.49■□□□□ 0.39
CMTM3-215ENST00000568477 RRP1P56182 461 aaKnown RBP17.49■□□□□ 0.39
CMTM3-215ENST00000568477 PROCA1Q8NCQ7 364 aaPredicted RBP17.49■□□□□ 0.39
CMTM3-215ENST00000568477 EDC3Q96F86 508 aaKnown RBP17.49■□□□□ 0.39
CMTM3-215ENST00000568477 CRNKL1Q9BZJ0 848 aaKnown RBP17.49■□□□□ 0.39
CMTM3-215ENST00000568477 GINM1Q9NU53 330 aa17.49■□□□□ 0.39
CMTM3-215ENST00000568477 KIAA0100Q14667 2235 aaKnown RBP17.49■□□□□ 0.39
CMTM3-215ENST00000568477 ECM2O94769 699 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-215ENST00000568477 GDF11O95390 407 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 PSMC4P43686 418 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 HMGCS2P54868 508 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 PRMT2P55345 433 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 SLC9C1Q4G0N8 1177 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 TTC6Q86TZ1 520 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 SMCR8Q8TEV9 937 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-215ENST00000568477 HAUS7Q99871 368 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 WDR18Q9BV38 432 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.48■□□□□ 0.39
CMTM3-215ENST00000568477 EHD4Q9H223 541 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 DCTPP1Q9H773 170 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 PNMA3Q9UL41 463 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 ZBTB21Q9ULJ3 1066 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 MYH1P12882 1939 aa17.48■□□□□ 0.39
CMTM3-215ENST00000568477 ZSWIM8A7E2V4 1837 aa17.47■□□□□ 0.39
CMTM3-215ENST00000568477 TCRBV5S4A2TA0A5A2 114 aa17.47■□□□□ 0.39
CMTM3-215ENST00000568477 FMNL1O95466 1100 aaPredicted RBP17.47■□□□□ 0.39
CMTM3-215ENST00000568477 HOXD10P28358 340 aa17.47■□□□□ 0.39
CMTM3-215ENST00000568477 PABPC4Q13310 644 aaKnown RBP eCLIP17.47■□□□□ 0.39
CMTM3-215ENST00000568477 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
CMTM3-215ENST00000568477 NBPF11Q86T75 865 aa17.47■□□□□ 0.39
CMTM3-215ENST00000568477 TRIM47Q96LD4 638 aa17.47■□□□□ 0.39
CMTM3-215ENST00000568477 SERPINB13Q9UIV8 391 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms