RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 SUPT16HQ9Y5B9 1047 aaKnown RBP11.6□□□□□ -0.55
SF3B3-211ENST00000568291 BTBD19C9JJ37 291 aa11.59□□□□□ -0.55
SF3B3-211ENST00000568291 GOLIM4O00461 696 aa11.59□□□□□ -0.55
SF3B3-211ENST00000568291 EN2P19622 333 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-211ENST00000568291 GSTO1P78417 241 aa11.59□□□□□ -0.55
SF3B3-211ENST00000568291 SNAPC2Q13487 334 aa11.59□□□□□ -0.55
SF3B3-211ENST00000568291 SLF2Q8IX21 1173 aa11.59□□□□□ -0.55
SF3B3-211ENST00000568291 MAGEB6Q8N7X4 407 aa11.59□□□□□ -0.55
SF3B3-211ENST00000568291 EXOC6Q8TAG9 804 aa11.59□□□□□ -0.55
SF3B3-211ENST00000568291 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
SF3B3-211ENST00000568291 ZNF341Q9BYN7 854 aa11.59□□□□□ -0.55
SF3B3-211ENST00000568291 LRRCC1Q9C099 1032 aa11.59□□□□□ -0.55
SF3B3-211ENST00000568291 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-211ENST00000568291 PHIPQ8WWQ0 1821 aa11.58□□□□□ -0.56
SF3B3-211ENST00000568291 IRF6O14896 467 aa11.58□□□□□ -0.56
SF3B3-211ENST00000568291 TLR2O60603 784 aa11.58□□□□□ -0.56
SF3B3-211ENST00000568291 LDHCP07864 332 aa11.58□□□□□ -0.56
SF3B3-211ENST00000568291 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-211ENST00000568291 MAPKAPK5Q8IW41 473 aa11.58□□□□□ -0.56
SF3B3-211ENST00000568291 TEX11Q8IYF3 940 aa11.58□□□□□ -0.56
SF3B3-211ENST00000568291 OTUD7AQ8TE49 926 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-211ENST00000568291 TGFBRAP1Q8WUH2 860 aa11.58□□□□□ -0.56
SF3B3-211ENST00000568291 IDI2Q9BXS1 227 aa11.58□□□□□ -0.56
SF3B3-211ENST00000568291 ARHGAP39Q9C0H5 1083 aa11.58□□□□□ -0.56
SF3B3-211ENST00000568291 DCTPP1Q9H773 170 aa11.58□□□□□ -0.56
SF3B3-211ENST00000568291 ZCCHC17Q9NP64 241 aaKnown RBP11.58□□□□□ -0.56
SF3B3-211ENST00000568291 ENTPD3O75355 529 aa11.57□□□□□ -0.56
SF3B3-211ENST00000568291 LACTBP83111 547 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-211ENST00000568291 KIF22Q14807 665 aa11.57□□□□□ -0.56
SF3B3-211ENST00000568291 NBPF11Q86T75 865 aa11.57□□□□□ -0.56
SF3B3-211ENST00000568291 SAP30BPQ9UHR5 308 aaKnown RBP11.57□□□□□ -0.56
SF3B3-211ENST00000568291 ATAD5Q96QE3 1844 aa11.57□□□□□ -0.56
SF3B3-211ENST00000568291 CENPFP49454 3210 aa11.57□□□□□ -0.56
SF3B3-211ENST00000568291 TRIOBPQ9H2D6 2365 aa11.56□□□□□ -0.56
SF3B3-211ENST00000568291 MAP4K4O95819 1239 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-211ENST00000568291 MYCP01106 439 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-211ENST00000568291 PPATQ06203 517 aa11.56□□□□□ -0.56
SF3B3-211ENST00000568291 HABP4Q5JVS0 413 aaKnown RBP11.56□□□□□ -0.56
SF3B3-211ENST00000568291 SLC9C2Q5TAH2 1124 aa11.56□□□□□ -0.56
SF3B3-211ENST00000568291 SH3TC2Q8TF17 1288 aa11.56□□□□□ -0.56
SF3B3-211ENST00000568291 NOL10Q9BSC4 688 aaKnown RBP11.56□□□□□ -0.56
SF3B3-211ENST00000568291 MKI67P46013 3256 aaKnown RBP11.55□□□□□ -0.56
SF3B3-211ENST00000568291 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-211ENST00000568291 BAG3O95817 575 aa11.55□□□□□ -0.56
SF3B3-211ENST00000568291 ATP5JP18859 108 aa11.55□□□□□ -0.56
SF3B3-211ENST00000568291 MAP3K12Q12852 859 aa11.55□□□□□ -0.56
SF3B3-211ENST00000568291 RRP1BQ14684 758 aaKnown RBP11.55□□□□□ -0.56
SF3B3-211ENST00000568291 OSBPL5Q9H0X9 879 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-211ENST00000568291 CPA4Q9UI42 421 aa11.55□□□□□ -0.56
SF3B3-211ENST00000568291 PALD1Q9ULE6 856 aa11.55□□□□□ -0.56
SF3B3-211ENST00000568291 ADGRA2Q96PE1 1338 aa11.55□□□□□ -0.56
SF3B3-211ENST00000568291 RFX7Q2KHR2 1363 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 ATRNL1Q5VV63 1379 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 MAST2Q6P0Q8 1798 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 PHF20L1A8MW92 1017 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 GNRH1P01148 92 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 PDE6AP16499 860 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 PPP4CP60510 307 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 EVX2Q03828 476 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 SHROOM1Q2M3G4 852 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-211ENST00000568291 NOL9Q5SY16 702 aaKnown RBP11.54□□□□□ -0.56
SF3B3-211ENST00000568291 B4GALNT3Q6L9W6 998 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 ANKRD23Q86SG2 305 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 PAG1Q9NWQ8 432 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 ZNF112Q9UJU3 913 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 KCNH4Q9UQ05 1017 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 ZNF532Q9HCE3 1301 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
SF3B3-211ENST00000568291 DOCK3Q8IZD9 2030 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 BRCA2P51587 3418 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 PDHXO00330 501 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 IGHDP01880 384 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 USP5P45974 858 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 PRMT2P55345 433 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 JAG1P78504 1218 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 ANKRD45Q5TZF3 282 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 C17orf99Q6UX52 265 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 HAUS7Q99871 368 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.53□□□□□ -0.56
SF3B3-211ENST00000568291 ECHDC1Q9NTX5 307 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 ZHX2Q9Y6X8 837 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 FLT1P17948 1338 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 CDK5RAP2Q96SN8 1893 aa11.53□□□□□ -0.56
SF3B3-211ENST00000568291 MAGEB6P1A0A0J9YX57 407 aa11.52□□□□□ -0.57
SF3B3-211ENST00000568291 TCRBV5S4A2TA0A5A2 114 aa11.52□□□□□ -0.57
SF3B3-211ENST00000568291 PRKAB2O43741 272 aa11.52□□□□□ -0.57
SF3B3-211ENST00000568291 CTGFP29279 349 aa11.52□□□□□ -0.57
SF3B3-211ENST00000568291 PSMC4P43686 418 aa11.52□□□□□ -0.57
SF3B3-211ENST00000568291 LCORLQ8N3X6 602 aa11.52□□□□□ -0.57
SF3B3-211ENST00000568291 TRIM47Q96LD4 638 aa11.52□□□□□ -0.57
SF3B3-211ENST00000568291 PARK7Q99497 189 aaKnown RBP11.52□□□□□ -0.57
SF3B3-211ENST00000568291 RIOK1Q9BRS2 568 aaKnown RBP11.52□□□□□ -0.57
SF3B3-211ENST00000568291 ARMT1Q9H993 441 aa11.52□□□□□ -0.57
SF3B3-211ENST00000568291 SRRDQ9UH36 339 aa11.52□□□□□ -0.57
SF3B3-211ENST00000568291 SMIM22K7EJ46 135 aa11.51□□□□□ -0.57
SF3B3-211ENST00000568291 FMNL1O95466 1100 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-211ENST00000568291 PTPRAP18433 802 aa11.51□□□□□ -0.57
SF3B3-211ENST00000568291 OSBPP22059 807 aa11.51□□□□□ -0.57
SF3B3-211ENST00000568291 MOGSQ13724 837 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms