RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ZBTB38Q8NAP3 1195 aaPredicted RBP9.69□□□□□ -0.86
SMG1-214ENST00000568038 CARMIL3Q8ND23 1372 aa9.69□□□□□ -0.86
SMG1-214ENST00000568038 ALG2Q9H553 416 aa9.69□□□□□ -0.86
SMG1-214ENST00000568038 PARP3Q9Y6F1 533 aa9.69□□□□□ -0.86
SMG1-214ENST00000568038 SH3TC1Q8TE82 1336 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 RNF225M0QZC1 329 aaPredicted RBP9.68□□□□□ -0.86
SMG1-214ENST00000568038 NTSR2O95665 410 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 THBS1P07996 1170 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 GNAI3P08754 354 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 IRS1P35568 1242 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 RASSF7Q02833 373 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 EML3Q32P44 896 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 KCTD17Q8N5Z5 321 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 NYXQ9GZU5 481 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 MTFR1LQ9H019 292 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 C1orf115Q9H7X2 142 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 ENAMQ9NRM1 1142 aa9.68□□□□□ -0.86
SMG1-214ENST00000568038 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
SMG1-214ENST00000568038 UTYO14607 1347 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 POM121CA8CG34 1229 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 IRS4O14654 1257 aaPredicted RBP9.67□□□□□ -0.86
SMG1-214ENST00000568038 GDF11O95390 407 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 HCLS1P14317 486 aaPredicted RBP9.67□□□□□ -0.86
SMG1-214ENST00000568038 SMTNP53814 917 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 CASP7P55210 303 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 EFHC2Q5JST6 749 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 DEPDC4Q8N2C3 294 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 CNBD1Q8NA66 436 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 NEDD1Q8NHV4 660 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 ACDQ96AP0 544 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 SUCLG2Q96I99 432 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 CHMP4BQ9H444 224 aaKnown RBP9.67□□□□□ -0.86
SMG1-214ENST00000568038 ZBTB40Q9NUA8 1239 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 NOD1Q9Y239 953 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 GTF3C3Q9Y5Q9 886 aa9.67□□□□□ -0.86
SMG1-214ENST00000568038 LRRFIP2Q9Y608 721 aaKnown RBP9.67□□□□□ -0.86
SMG1-214ENST00000568038 N4BP2Q86UW6 1770 aaPredicted RBP9.66□□□□□ -0.86
SMG1-214ENST00000568038 CASZ1Q86V15 1759 aa9.66□□□□□ -0.86
SMG1-214ENST00000568038 TMEM229AB2RXF0 380 aa9.66□□□□□ -0.86
SMG1-214ENST00000568038 GNAI2P04899 355 aa9.66□□□□□ -0.86
SMG1-214ENST00000568038 BCRP11274 1271 aa9.66□□□□□ -0.86
SMG1-214ENST00000568038 POLD1P28340 1107 aa9.66□□□□□ -0.86
SMG1-214ENST00000568038 GSK3AP49840 483 aa9.66□□□□□ -0.86
SMG1-214ENST00000568038 ST5P78524 1137 aa9.66□□□□□ -0.86
SMG1-214ENST00000568038 PRR5LQ6MZQ0 368 aa9.66□□□□□ -0.86
SMG1-214ENST00000568038 TBC1D9Q6ZT07 1266 aa9.66□□□□□ -0.86
SMG1-214ENST00000568038 PHF24Q9UPV7 400 aa9.66□□□□□ -0.86
SMG1-214ENST00000568038 ABCC12Q96J65 1359 aa9.65□□□□□ -0.86
SMG1-214ENST00000568038 IBTKQ9P2D0 1353 aaPredicted RBP9.65□□□□□ -0.86
SMG1-214ENST00000568038 CDHR2Q9BYE9 1310 aa9.65□□□□□ -0.86
SMG1-214ENST00000568038 PDE8AO60658 829 aa9.65□□□□□ -0.86
SMG1-214ENST00000568038 EPHA10Q5JZY3 1008 aa9.65□□□□□ -0.86
SMG1-214ENST00000568038 KAZALD1Q96I82 304 aa9.65□□□□□ -0.86
SMG1-214ENST00000568038 CFHR5Q9BXR6 569 aa9.65□□□□□ -0.86
SMG1-214ENST00000568038 NIFKQ9BYG3 293 aaKnown RBP9.65□□□□□ -0.86
SMG1-214ENST00000568038 BICC1Q9H694 974 aaKnown RBP9.65□□□□□ -0.86
SMG1-214ENST00000568038 SPON1Q9HCB6 807 aa9.65□□□□□ -0.86
SMG1-214ENST00000568038 HDAC5Q9UQL6 1122 aa9.65□□□□□ -0.86
SMG1-214ENST00000568038 CHMP3Q9Y3E7 222 aa9.65□□□□□ -0.86
SMG1-214ENST00000568038 PCDHGA11Q9Y5H2 935 aa9.65□□□□□ -0.86
SMG1-214ENST00000568038 COL24A1Q17RW2 1714 aa9.65□□□□□ -0.87
SMG1-214ENST00000568038 HSP90B1P14625 803 aaKnown RBP9.64□□□□□ -0.87
SMG1-214ENST00000568038 GTF2IP78347 998 aa9.64□□□□□ -0.87
SMG1-214ENST00000568038 FOXO4P98177 505 aa9.64□□□□□ -0.87
SMG1-214ENST00000568038 NCOA4Q13772 614 aa9.64□□□□□ -0.87
SMG1-214ENST00000568038 SLC10A5Q5PT55 438 aa9.64□□□□□ -0.87
SMG1-214ENST00000568038 LMBR1LQ6UX01 489 aa9.64□□□□□ -0.87
SMG1-214ENST00000568038 SCARF2Q96GP6 870 aaPredicted RBP9.64□□□□□ -0.87
SMG1-214ENST00000568038 ABHD17AQ96GS6 310 aa9.64□□□□□ -0.87
SMG1-214ENST00000568038 PLA2G12BQ9BX93 195 aa9.64□□□□□ -0.87
SMG1-214ENST00000568038 CTSWP56202 376 aa9.63□□□□□ -0.87
SMG1-214ENST00000568038 ANKRD44Q8N8A2 993 aa9.63□□□□□ -0.87
SMG1-214ENST00000568038 PNMA6EA0A0J9YXQ4 647 aa9.62□□□□□ -0.87
SMG1-214ENST00000568038 A6NJY4 79 aa9.62□□□□□ -0.87
SMG1-214ENST00000568038 ATP8B2P98198 1209 aa9.62□□□□□ -0.87
SMG1-214ENST00000568038 AAMPQ13685 434 aa9.62□□□□□ -0.87
SMG1-214ENST00000568038 ARSJQ5FYB0 599 aaPredicted RBP9.62□□□□□ -0.87
SMG1-214ENST00000568038 CEP85Q6P2H3 762 aa9.62□□□□□ -0.87
SMG1-214ENST00000568038 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMG1-214ENST00000568038 TTLL11Q8NHH1 800 aa9.62□□□□□ -0.87
SMG1-214ENST00000568038 BRIP1Q9BX63 1249 aa9.62□□□□□ -0.87
SMG1-214ENST00000568038 PPP1R1BQ9UD71 204 aaPredicted RBP9.62□□□□□ -0.87
SMG1-214ENST00000568038 CNTNAP5Q8WYK1 1306 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 CDK2AP1O14519 115 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 SRGAP3O43295 1099 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 CSF1RP07333 972 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 PDE6BP35913 854 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 MAP2K3P46734 347 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 UBAP2LQ14157 1087 aaKnown RBP9.61□□□□□ -0.87
SMG1-214ENST00000568038 LBRQ14739 615 aaKnown RBP9.61□□□□□ -0.87
SMG1-214ENST00000568038 SF3B3Q15393 1217 aaKnown RBP9.61□□□□□ -0.87
SMG1-214ENST00000568038 RABL6Q3YEC7 729 aaPredicted RBP9.61□□□□□ -0.87
SMG1-214ENST00000568038 CCDC152Q4G0S7 254 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 RPAP2Q8IXW5 612 aaPredicted RBP9.61□□□□□ -0.87
SMG1-214ENST00000568038 KLRG1Q96E93 195 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 OXCT2Q9BYC2 517 aaPredicted RBP9.61□□□□□ -0.87
SMG1-214ENST00000568038 GREM2Q9H772 168 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 SEC31BQ9NQW1 1179 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 USP3Q9Y6I4 520 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms