RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 FKBP1BP68106 108 aa21.51■■□□□ 1.03
COMMD4-222ENST00000568034 DCAF15Q66K64 600 aa21.51■■□□□ 1.03
COMMD4-222ENST00000568034 TTC6Q86TZ1 520 aa21.51■■□□□ 1.03
COMMD4-222ENST00000568034 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.51■■□□□ 1.03
COMMD4-222ENST00000568034 KLRG1Q96E93 195 aa21.51■■□□□ 1.03
COMMD4-222ENST00000568034 HOOK2Q96ED9 719 aa21.51■■□□□ 1.03
COMMD4-222ENST00000568034 DSCC1Q9BVC3 393 aa21.51■■□□□ 1.03
COMMD4-222ENST00000568034 NAPBQ9H115 298 aa21.51■■□□□ 1.03
COMMD4-222ENST00000568034 ZNF112Q9UJU3 913 aa21.51■■□□□ 1.03
COMMD4-222ENST00000568034 ANGEL1Q9UNK9 670 aaKnown RBP21.51■■□□□ 1.03
COMMD4-222ENST00000568034 ROBO3Q96MS0 1386 aa21.5■■□□□ 1.03
COMMD4-222ENST00000568034 PHF20L1A8MW92 1017 aa21.5■■□□□ 1.03
COMMD4-222ENST00000568034 PPP1R12BO60237 982 aaPredicted RBP21.5■■□□□ 1.03
COMMD4-222ENST00000568034 FGAP02671 866 aa21.5■■□□□ 1.03
COMMD4-222ENST00000568034 PTH1RQ03431 593 aa21.5■■□□□ 1.03
COMMD4-222ENST00000568034 DDRGK1Q96HY6 314 aa21.5■■□□□ 1.03
COMMD4-222ENST00000568034 ZNF341Q9BYN7 854 aa21.5■■□□□ 1.03
COMMD4-222ENST00000568034 NACAP1Q9BZK3 213 aa21.5■■□□□ 1.03
COMMD4-222ENST00000568034 TLL2Q9Y6L7 1015 aa21.5■■□□□ 1.03
COMMD4-222ENST00000568034 UBE2Q2LH0YL09 131 aa21.49■■□□□ 1.03
COMMD4-222ENST00000568034 RRP1BQ14684 758 aaKnown RBP21.49■■□□□ 1.03
COMMD4-222ENST00000568034 LDLRAD1Q5T700 205 aa21.49■■□□□ 1.03
COMMD4-222ENST00000568034 SAPCD2Q86UD0 394 aa21.49■■□□□ 1.03
COMMD4-222ENST00000568034 FOXP4Q8IVH2 680 aaPredicted RBP21.49■■□□□ 1.03
COMMD4-222ENST00000568034 C2orf69Q8N8R5 385 aa21.49■■□□□ 1.03
COMMD4-222ENST00000568034 LSG1Q9H089 658 aaKnown RBP21.49■■□□□ 1.03
COMMD4-222ENST00000568034 CREBZFQ9NS37 354 aa21.49■■□□□ 1.03
COMMD4-222ENST00000568034 HERC5Q9UII4 1024 aaKnown RBP21.49■■□□□ 1.03
COMMD4-222ENST00000568034 SERPINB13Q9UIV8 391 aa21.49■■□□□ 1.03
COMMD4-222ENST00000568034 ARMC9Q7Z3E5 817 aa21.48■■□□□ 1.03
COMMD4-222ENST00000568034 SLC44A5Q8NCS7 719 aa21.48■■□□□ 1.03
COMMD4-222ENST00000568034 DYNLL2Q96FJ2 89 aa21.48■■□□□ 1.03
COMMD4-222ENST00000568034 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.48■■□□□ 1.03
COMMD4-222ENST00000568034 HSPA6P17066 643 aa21.47■■□□□ 1.03
COMMD4-222ENST00000568034 INPP5BP32019 993 aa21.47■■□□□ 1.03
COMMD4-222ENST00000568034 SHMT1P34896 483 aa21.47■■□□□ 1.03
COMMD4-222ENST00000568034 TTLL12Q14166 644 aaPredicted RBP21.47■■□□□ 1.03
COMMD4-222ENST00000568034 CASC1Q6TDU7 716 aa21.47■■□□□ 1.03
COMMD4-222ENST00000568034 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.47■■□□□ 1.03
COMMD4-222ENST00000568034 WRNIP1Q96S55 665 aa21.47■■□□□ 1.03
COMMD4-222ENST00000568034 LAMA4Q16363 1823 aa21.47■■□□□ 1.03
COMMD4-222ENST00000568034 MINDY4BA8MYZ0 360 aa21.46■■□□□ 1.03
COMMD4-222ENST00000568034 IREB2P48200 963 aaKnown RBP21.46■■□□□ 1.03
COMMD4-222ENST00000568034 HTRA3P83110 453 aa21.46■■□□□ 1.03
COMMD4-222ENST00000568034 PPARAQ07869 468 aa21.46■■□□□ 1.03
COMMD4-222ENST00000568034 TATDN1Q6P1N9 297 aa21.46■■□□□ 1.03
COMMD4-222ENST00000568034 C16orf86Q6ZW13 317 aa21.46■■□□□ 1.03
COMMD4-222ENST00000568034 CRACR2BQ8N4Y2 399 aaPredicted RBP21.46■■□□□ 1.03
COMMD4-222ENST00000568034 NBPF3Q9H094 633 aa21.46■■□□□ 1.03
COMMD4-222ENST00000568034 TACC3Q9Y6A5 838 aa21.46■■□□□ 1.03
COMMD4-222ENST00000568034 HUNKP57058 714 aa21.45■■□□□ 1.02
COMMD4-222ENST00000568034 MAP3K9P80192 1104 aa21.45■■□□□ 1.02
COMMD4-222ENST00000568034 AMOTL1Q8IY63 956 aa21.45■■□□□ 1.02
COMMD4-222ENST00000568034 MAP4K1Q92918 833 aa21.45■■□□□ 1.02
COMMD4-222ENST00000568034 CLMNQ96JQ2 1002 aa21.45■■□□□ 1.02
COMMD4-222ENST00000568034 ANAPC4Q9UJX5 808 aa21.45■■□□□ 1.02
COMMD4-222ENST00000568034 JAG1P78504 1218 aa21.44■■□□□ 1.02
COMMD4-222ENST00000568034 VGLL4Q14135 290 aa21.44■■□□□ 1.02
COMMD4-222ENST00000568034 SHROOM1Q2M3G4 852 aaPredicted RBP21.44■■□□□ 1.02
COMMD4-222ENST00000568034 NOL9Q5SY16 702 aaKnown RBP21.44■■□□□ 1.02
COMMD4-222ENST00000568034 ZKSCAN4Q969J2 545 aaPredicted RBP21.44■■□□□ 1.02
COMMD4-222ENST00000568034 TAOK2Q9UL54 1235 aa21.44■■□□□ 1.02
COMMD4-222ENST00000568034 ABT1Q9ULW3 272 aaKnown RBP21.44■■□□□ 1.02
COMMD4-222ENST00000568034 SNCAIPQ9Y6H5 919 aa21.44■■□□□ 1.02
COMMD4-222ENST00000568034 DOCK1Q14185 1865 aa21.43■■□□□ 1.02
COMMD4-222ENST00000568034 UNCXA6NJT0 531 aa21.43■■□□□ 1.02
COMMD4-222ENST00000568034 CDK8P49336 464 aa21.43■■□□□ 1.02
COMMD4-222ENST00000568034 ANKRD13AQ8IZ07 590 aa21.43■■□□□ 1.02
COMMD4-222ENST00000568034 HHIPL1Q96JK4 782 aa21.43■■□□□ 1.02
COMMD4-222ENST00000568034 ANO2Q9NQ90 1003 aa21.43■■□□□ 1.02
COMMD4-222ENST00000568034 SWAP70Q9UH65 585 aa21.43■■□□□ 1.02
COMMD4-222ENST00000568034 RASSF10A6NK89 507 aa21.42■■□□□ 1.02
COMMD4-222ENST00000568034 CAP2P40123 477 aa21.42■■□□□ 1.02
COMMD4-222ENST00000568034 HAND2P61296 217 aa21.42■■□□□ 1.02
COMMD4-222ENST00000568034 CTDSPL2Q05D32 466 aa21.42■■□□□ 1.02
COMMD4-222ENST00000568034 TBC1D10CQ8IV04 446 aa21.42■■□□□ 1.02
COMMD4-222ENST00000568034 STK11IPQ8N1F8 1099 aa21.42■■□□□ 1.02
COMMD4-222ENST00000568034 ATAD5Q96QE3 1844 aa21.42■■□□□ 1.02
COMMD4-222ENST00000568034 TRIM34Q9BYJ4 488 aa21.42■■□□□ 1.02
COMMD4-222ENST00000568034 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.42■■□□□ 1.02
COMMD4-222ENST00000568034 RBM8AQ9Y5S9 174 aaKnown RBP21.42■■□□□ 1.02
COMMD4-222ENST00000568034 U3KPZ7 1027 aaPredicted RBP21.42■■□□□ 1.02
COMMD4-222ENST00000568034 CTNND1O60716 968 aaKnown RBP21.41■■□□□ 1.02
COMMD4-222ENST00000568034 GDF11O95390 407 aa21.41■■□□□ 1.02
COMMD4-222ENST00000568034 FGRP09769 529 aa21.41■■□□□ 1.02
COMMD4-222ENST00000568034 C8orf34Q49A92 452 aa21.41■■□□□ 1.02
COMMD4-222ENST00000568034 KIAA1211Q6ZU35 1233 aa21.41■■□□□ 1.02
COMMD4-222ENST00000568034 SCYL3Q8IZE3 742 aa21.41■■□□□ 1.02
COMMD4-222ENST00000568034 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.41■■□□□ 1.02
COMMD4-222ENST00000568034 CEP350Q5VT06 3117 aa21.41■■□□□ 1.02
COMMD4-222ENST00000568034 MYH8P13535 1937 aa21.41■■□□□ 1.02
COMMD4-222ENST00000568034 RGMBQ6NW40 437 aa21.4■■□□□ 1.02
COMMD4-222ENST00000568034 RASAL3Q86YV0 1011 aa21.4■■□□□ 1.02
COMMD4-222ENST00000568034 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
COMMD4-222ENST00000568034 INCENPQ9NQS7 918 aa21.4■■□□□ 1.02
COMMD4-222ENST00000568034 CTNNA3Q9UI47 895 aa21.4■■□□□ 1.02
COMMD4-222ENST00000568034 TAF6LQ9Y6J9 622 aa21.4■■□□□ 1.02
COMMD4-222ENST00000568034 GREB1LQ9C091 1923 aaPredicted RBP21.39■■□□□ 1.02
COMMD4-222ENST00000568034 PRDM1O75626 825 aa21.39■■□□□ 1.01
COMMD4-222ENST00000568034 CYP21A2P08686 494 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms