RNA–Protein interactions for RNA: ENST00000567479.1

KIFC3-231, Transcript of kinesin family member C3, human

TSL 4

Gene KIFC3, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-231	ENST00000567479	C17orf99	Q6UX52	265 aa		11.44	□□□□□ -0.58
KIFC3-231	ENST00000567479	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.44	□□□□□ -0.58
KIFC3-231	ENST00000567479	CERS3	Q8IU89	383 aa		11.44	□□□□□ -0.58
KIFC3-231	ENST00000567479	CPA4	Q9UI42	421 aa		11.44	□□□□□ -0.58
KIFC3-231	ENST00000567479	OTOF	Q9HC10	1997 aa		11.44	□□□□□ -0.58
KIFC3-231	ENST00000567479	TRIM75P	A6NK02	468 aa		11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	GNRH1	P01148	92 aa		11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	USP5	P45974	858 aa		11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	LACTB	P83111	547 aa	Predicted RBP	11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	CAP1	Q01518	475 aa		11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	GADL1	Q6ZQY3	521 aa		11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	MIGA1	Q8NAN2	632 aa		11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	TRIM34	Q9BYJ4	488 aa		11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	TBC1D2	Q9BYX2	928 aa		11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	PALD1	Q9ULE6	856 aa		11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	AK9	Q5TCS8	1911 aa		11.43	□□□□□ -0.58
KIFC3-231	ENST00000567479	FLT1	P17948	1338 aa		11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	USP17L5	A8MUK1	530 aa		11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	HLA-DOA	P06340	250 aa		11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	CYP2C8	P10632	490 aa		11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	SPP2	Q13103	211 aa		11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	RRP1B	Q14684	758 aa	Known RBP	11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	SLC9C2	Q5TAH2	1124 aa		11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	NBPF11	Q86T75	865 aa		11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	CCDC84	Q86UT8	332 aa	Predicted RBP	11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	ZNF280C	Q8ND82	737 aa		11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	PARK7	Q99497	189 aa	Known RBP	11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	DNAJC2	Q99543	621 aa	Known RBP	11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	SAP30BP	Q9UHR5	308 aa	Known RBP	11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	SLC45A1	Q9Y2W3	748 aa		11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	COL2A1	P02458	1487 aa	Predicted RBP	11.42	□□□□□ -0.58
KIFC3-231	ENST00000567479	GOLIM4	O00461	696 aa		11.41	□□□□□ -0.58
KIFC3-231	ENST00000567479	ECM2	O94769	699 aa	Predicted RBP	11.41	□□□□□ -0.58
KIFC3-231	ENST00000567479	FMNL1	O95466	1100 aa	Predicted RBP	11.41	□□□□□ -0.58
KIFC3-231	ENST00000567479	HOXD10	P28358	340 aa		11.41	□□□□□ -0.58
KIFC3-231	ENST00000567479	PSMC4	P43686	418 aa		11.41	□□□□□ -0.58
KIFC3-231	ENST00000567479	METTL16	Q86W50	562 aa	Known RBP	11.41	□□□□□ -0.58
KIFC3-231	ENST00000567479	LRRCC1	Q9C099	1032 aa		11.41	□□□□□ -0.58
KIFC3-231	ENST00000567479	ARHGAP39	Q9C0H5	1083 aa		11.41	□□□□□ -0.58
KIFC3-231	ENST00000567479	AS3MT	Q9HBK9	375 aa		11.41	□□□□□ -0.58
KIFC3-231	ENST00000567479	LAMB1	P07942	1786 aa		11.41	□□□□□ -0.58
KIFC3-231	ENST00000567479	MAGEB6P1	A0A0J9YX57	407 aa		11.4	□□□□□ -0.58
KIFC3-231	ENST00000567479	ASNS	P08243	561 aa		11.4	□□□□□ -0.58
KIFC3-231	ENST00000567479	ATP5J	P18859	108 aa		11.4	□□□□□ -0.58
KIFC3-231	ENST00000567479	PRMT2	P55345	433 aa		11.4	□□□□□ -0.58
KIFC3-231	ENST00000567479	SLC4A8	Q2Y0W8	1093 aa		11.4	□□□□□ -0.58
KIFC3-231	ENST00000567479	TTC6	Q86TZ1	520 aa		11.4	□□□□□ -0.58
KIFC3-231	ENST00000567479	ARMC5	Q96C12	935 aa		11.4	□□□□□ -0.58
KIFC3-231	ENST00000567479	BOLA2	Q9H3K6	86 aa		11.4	□□□□□ -0.58
KIFC3-231	ENST00000567479	AGTPBP1	Q9UPW5	1226 aa		11.4	□□□□□ -0.58
KIFC3-231	ENST00000567479	PTCH2	Q9Y6C5	1203 aa		11.4	□□□□□ -0.58
KIFC3-231	ENST00000567479	ADGRA2	Q96PE1	1338 aa		11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	ZNF532	Q9HCE3	1301 aa		11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	BCR	P11274	1271 aa		11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	PDE6A	P16499	860 aa		11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	SLC9C1	Q4G0N8	1177 aa		11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	RIOK1	Q9BRS2	568 aa	Known RBP	11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	WDR18	Q9BV38	432 aa		11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	TMEM106C	Q9BVX2	250 aa		11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	GINM1	Q9NU53	330 aa		11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	PAG1	Q9NWQ8	432 aa		11.39	□□□□□ -0.59
KIFC3-231	ENST00000567479	SMARCA5	O60264	1052 aa	Predicted RBP	11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	POLR3D	P05423	398 aa	Predicted RBP	11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	OSBP	P22059	807 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	CTGF	P29279	349 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	HMGCS2	P54868	508 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	FCGRT	P55899	365 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	JAG1	P78504	1218 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	SH3D19	Q5HYK7	790 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	TREML2	Q5T2D2	321 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	EDC3	Q96F86	508 aa	Known RBP	11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	TRIM47	Q96LD4	638 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	HAUS7	Q99871	368 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	DCTPP1	Q9H773	170 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	DNAJC18	Q9H819	358 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	TMOD4	Q9NZQ9	345 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	SRRD	Q9UH36	339 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	SERPINB13	Q9UIV8	391 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	PNMA3	Q9UL41	463 aa		11.38	□□□□□ -0.59
KIFC3-231	ENST00000567479	TCRBV5S4A2T	A0A5A2	114 aa		11.37	□□□□□ -0.59
KIFC3-231	ENST00000567479	POTEF	A5A3E0	1075 aa		11.37	□□□□□ -0.59
KIFC3-231	ENST00000567479	C19orf81	C9J6K1	198 aa		11.37	□□□□□ -0.59
KIFC3-231	ENST00000567479	GDF11	O95390	407 aa		11.37	□□□□□ -0.59
KIFC3-231	ENST00000567479	BACE1	P56817	501 aa		11.37	□□□□□ -0.59
KIFC3-231	ENST00000567479	TATDN1	Q6P1N9	297 aa		11.37	□□□□□ -0.59
KIFC3-231	ENST00000567479	RAET1E	Q8TD07	263 aa		11.37	□□□□□ -0.59
KIFC3-231	ENST00000567479	ZNF333	Q96JL9	665 aa		11.37	□□□□□ -0.59
KIFC3-231	ENST00000567479	EHD4	Q9H223	541 aa		11.37	□□□□□ -0.59
KIFC3-231	ENST00000567479	USP17L10	C9JJH3	530 aa		11.36	□□□□□ -0.59
KIFC3-231	ENST00000567479	ADD2	P35612	726 aa		11.36	□□□□□ -0.59
KIFC3-231	ENST00000567479	GCLC	P48506	637 aa	Predicted RBP	11.36	□□□□□ -0.59
KIFC3-231	ENST00000567479	PLCD1	P51178	756 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms