RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 ZBTB40Q9NUA8 1239 aa17.42■□□□□ 0.38
COMMD4-216ENST00000567023 DDX19BQ9UMR2 479 aa17.42■□□□□ 0.38
COMMD4-216ENST00000567023 EXOC6BQ9Y2D4 811 aa17.42■□□□□ 0.38
COMMD4-216ENST00000567023 MAST2Q6P0Q8 1798 aa17.41■□□□□ 0.38
COMMD4-216ENST00000567023 CTGFP29279 349 aa17.41■□□□□ 0.38
COMMD4-216ENST00000567023 CAP2P40123 477 aa17.41■□□□□ 0.38
COMMD4-216ENST00000567023 SLC9C1Q4G0N8 1177 aa17.41■□□□□ 0.38
COMMD4-216ENST00000567023 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
COMMD4-216ENST00000567023 FAM196BA6NMK8 535 aa17.4■□□□□ 0.38
COMMD4-216ENST00000567023 CYP2C8P10632 490 aa17.4■□□□□ 0.38
COMMD4-216ENST00000567023 PSMC4P43686 418 aa17.4■□□□□ 0.38
COMMD4-216ENST00000567023 CERS3Q8IU89 383 aa17.4■□□□□ 0.38
COMMD4-216ENST00000567023 FOXP4Q8IVH2 680 aaPredicted RBP17.4■□□□□ 0.38
COMMD4-216ENST00000567023 RHPN1Q8TCX5 695 aa17.4■□□□□ 0.38
COMMD4-216ENST00000567023 TGFBRAP1Q8WUH2 860 aa17.4■□□□□ 0.38
COMMD4-216ENST00000567023 TRIM47Q96LD4 638 aa17.4■□□□□ 0.38
COMMD4-216ENST00000567023 PTPRFP10586 1907 aa17.4■□□□□ 0.38
COMMD4-216ENST00000567023 FLT1P17948 1338 aa17.4■□□□□ 0.38
COMMD4-216ENST00000567023 KIAA0100Q14667 2235 aaKnown RBP17.4■□□□□ 0.38
COMMD4-216ENST00000567023 MYO5AQ9Y4I1 1855 aaKnown RBP17.39■□□□□ 0.38
COMMD4-216ENST00000567023 TRIM75PA6NK02 468 aa17.39■□□□□ 0.37
COMMD4-216ENST00000567023 HOXD10P28358 340 aa17.39■□□□□ 0.37
COMMD4-216ENST00000567023 RRP1BQ14684 758 aaKnown RBP17.39■□□□□ 0.37
COMMD4-216ENST00000567023 AACSQ86V21 672 aa17.39■□□□□ 0.37
COMMD4-216ENST00000567023 SIRT2Q8IXJ6 389 aa17.39■□□□□ 0.37
COMMD4-216ENST00000567023 ZNF280CQ8ND82 737 aa17.39■□□□□ 0.37
COMMD4-216ENST00000567023 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
COMMD4-216ENST00000567023 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-216ENST00000567023 SRRDQ9UH36 339 aa17.39■□□□□ 0.37
COMMD4-216ENST00000567023 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
COMMD4-216ENST00000567023 AGTPBP1Q9UPW5 1226 aa17.39■□□□□ 0.37
COMMD4-216ENST00000567023 COG6Q9Y2V7 657 aa17.39■□□□□ 0.37
COMMD4-216ENST00000567023 ZSWIM8A7E2V4 1837 aa17.38■□□□□ 0.37
COMMD4-216ENST00000567023 CYP7A1P22680 504 aa17.38■□□□□ 0.37
COMMD4-216ENST00000567023 SPP2Q13103 211 aa17.38■□□□□ 0.37
COMMD4-216ENST00000567023 GADL1Q6ZQY3 521 aa17.38■□□□□ 0.37
COMMD4-216ENST00000567023 PROCA1Q8NCQ7 364 aaPredicted RBP17.38■□□□□ 0.37
COMMD4-216ENST00000567023 FOCADQ5VW36 1801 aa17.37■□□□□ 0.37
COMMD4-216ENST00000567023 USP17L5A8MUK1 530 aa17.37■□□□□ 0.37
COMMD4-216ENST00000567023 HMMRO75330 724 aa17.37■□□□□ 0.37
COMMD4-216ENST00000567023 IDH1O75874 414 aaKnown RBP17.37■□□□□ 0.37
COMMD4-216ENST00000567023 FMNL1O95466 1100 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-216ENST00000567023 OSBPP22059 807 aa17.37■□□□□ 0.37
COMMD4-216ENST00000567023 MAP3K12Q12852 859 aa17.37■□□□□ 0.37
COMMD4-216ENST00000567023 PRPF38BQ5VTL8 546 aaKnown RBP17.37■□□□□ 0.37
COMMD4-216ENST00000567023 CCDC84Q86UT8 332 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-216ENST00000567023 MAPKAPK5Q8IW41 473 aa17.37■□□□□ 0.37
COMMD4-216ENST00000567023 CLASRPQ8N2M8 674 aaKnown RBP17.37■□□□□ 0.37
COMMD4-216ENST00000567023 KIF1BPQ96EK5 621 aa17.37■□□□□ 0.37
COMMD4-216ENST00000567023 TMEM106CQ9BVX2 250 aa17.37■□□□□ 0.37
COMMD4-216ENST00000567023 ANTXR1Q9H6X2 564 aa17.37■□□□□ 0.37
COMMD4-216ENST00000567023 CDK5RAP2Q96SN8 1893 aa17.37■□□□□ 0.37
COMMD4-216ENST00000567023 SIPA1L1O43166 1804 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 RAB11FIP3O75154 756 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 ASNSP08243 561 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 EN2P19622 333 aaPredicted RBP17.36■□□□□ 0.37
COMMD4-216ENST00000567023 FCGRTP55899 365 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 SH3D19Q5HYK7 790 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 MAGEB6Q8N7X4 407 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 SH3TC2Q8TF17 1288 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 DNAJC18Q9H819 358 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 IL1RAPL2Q9NP60 686 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 GINM1Q9NU53 330 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 NDUFB9Q9Y6M9 179 aa17.36■□□□□ 0.37
COMMD4-216ENST00000567023 DYNLL1P63167 89 aaKnown RBP17.35■□□□□ 0.37
COMMD4-216ENST00000567023 PDE3AQ14432 1141 aa17.35■□□□□ 0.37
COMMD4-216ENST00000567023 TTF1Q15361 905 aaPredicted RBP17.35■□□□□ 0.37
COMMD4-216ENST00000567023 TREML2Q5T2D2 321 aa17.35■□□□□ 0.37
COMMD4-216ENST00000567023 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.35■□□□□ 0.37
COMMD4-216ENST00000567023 AS3MTQ9HBK9 375 aa17.35■□□□□ 0.37
COMMD4-216ENST00000567023 PNMA3Q9UL41 463 aa17.35■□□□□ 0.37
COMMD4-216ENST00000567023 MYPNQ86TC9 1320 aa17.34■□□□□ 0.37
COMMD4-216ENST00000567023 SMCR8Q8TEV9 937 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-216ENST00000567023 ATAD5Q96QE3 1844 aa17.34■□□□□ 0.37
COMMD4-216ENST00000567023 HLA-DOAP06340 250 aa17.33■□□□□ 0.36
COMMD4-216ENST00000567023 GRK4P32298 578 aa17.33■□□□□ 0.36
COMMD4-216ENST00000567023 HMGCS2P54868 508 aa17.33■□□□□ 0.36
COMMD4-216ENST00000567023 BACE1P56817 501 aa17.33■□□□□ 0.36
COMMD4-216ENST00000567023 JAG1P78504 1218 aa17.33■□□□□ 0.36
COMMD4-216ENST00000567023 PABPC4Q13310 644 aaKnown RBP eCLIP17.33■□□□□ 0.36
COMMD4-216ENST00000567023 SLC4A8Q2Y0W8 1093 aa17.33■□□□□ 0.36
COMMD4-216ENST00000567023 CRACR2BQ8N4Y2 399 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-216ENST00000567023 MIGA1Q8NAN2 632 aa17.33■□□□□ 0.36
COMMD4-216ENST00000567023 RAET1EQ8TD07 263 aa17.33■□□□□ 0.36
COMMD4-216ENST00000567023 LOC285556D6RIA3 1793 aa17.33■□□□□ 0.36
COMMD4-216ENST00000567023 ECM2O94769 699 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-216ENST00000567023 IFIT2P09913 472 aaKnown RBP17.32■□□□□ 0.36
COMMD4-216ENST00000567023 GCLCP48506 637 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-216ENST00000567023 PRKCZQ05513 592 aa17.32■□□□□ 0.36
COMMD4-216ENST00000567023 FAM110CQ1W6H9 321 aa17.32■□□□□ 0.36
COMMD4-216ENST00000567023 TATDN1Q6P1N9 297 aa17.32■□□□□ 0.36
COMMD4-216ENST00000567023 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
COMMD4-216ENST00000567023 TRIM34Q9BYJ4 488 aa17.32■□□□□ 0.36
COMMD4-216ENST00000567023 EHD4Q9H223 541 aa17.32■□□□□ 0.36
COMMD4-216ENST00000567023 SAP30BPQ9UHR5 308 aaKnown RBP17.32■□□□□ 0.36
COMMD4-216ENST00000567023 MGAMO43451 1857 aa17.32■□□□□ 0.36
COMMD4-216ENST00000567023 C19orf81C9J6K1 198 aa17.31■□□□□ 0.36
COMMD4-216ENST00000567023 HOXA7P31268 230 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms