RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 DDTLA6NHG4 134 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 UNCXA6NJT0 531 aa12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 WDHD1O75717 1129 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 GTF2A2P52657 109 aa12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 INHBEP58166 350 aa12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 HSP90AB4PQ58FF6 505 aa12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 ERO1BQ86YB8 467 aa12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 RHPN1Q8TCX5 695 aa12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 SH3RF3Q8TEJ3 882 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
GTF3C1-206ENST00000566779 GPR75-ASB3A0A0A6YYF3 556 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 IRF6O14896 467 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 ENTPD3O75355 529 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 CYP2E1P05181 493 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 IFIT2P09913 472 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 SOX10P56693 466 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 SNAPC2Q13487 334 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 SH3BP5LQ7L8J4 393 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 MAPKAPK5Q8IW41 473 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 CLASRPQ8N2M8 674 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 DNAJC2Q99543 621 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 PTPN18Q99952 460 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 IDI2Q9BXS1 227 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 PICK1Q9NRD5 415 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 ZBTB40Q9NUA8 1239 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 BAZ2AQ9UIF9 1905 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 MGAMO43451 1857 aa12.34□□□□□ -0.43
GTF3C1-206ENST00000566779 CETPP11597 493 aa12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 CYP7A1P22680 504 aa12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 RHBDL3P58872 404 aa12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 PPIL2Q13356 520 aa12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 ADGRA1Q86SQ6 560 aa12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 CCDC84Q86UT8 332 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 RPAP2Q8IXW5 612 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 MIGA1Q8NAN2 632 aa12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 CD99L2Q8TCZ2 262 aa12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 TRIM34Q9BYJ4 488 aa12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 SAP30BPQ9UHR5 308 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 TRIM17Q9Y577 477 aa12.33□□□□□ -0.44
GTF3C1-206ENST00000566779 BAG3O95817 575 aa12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 DYNLL1P63167 89 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 GADL1Q6ZQY3 521 aa12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 SIRT2Q8IXJ6 389 aa12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 MAGEB6Q8N7X4 407 aa12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 TGFBRAP1Q8WUH2 860 aa12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 KIF1BPQ96EK5 621 aa12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 FAM163AQ96GL9 167 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 OSBPL5Q9H0X9 879 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 ANTXR1Q9H6X2 564 aa12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 ZFYVE28Q9HCC9 887 aa12.32□□□□□ -0.44
GTF3C1-206ENST00000566779 BTBD19C9JJ37 291 aa12.31□□□□□ -0.44
GTF3C1-206ENST00000566779 SMARCA5O60264 1052 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-206ENST00000566779 PLCG2P16885 1265 aa12.31□□□□□ -0.44
GTF3C1-206ENST00000566779 PPATQ06203 517 aa12.31□□□□□ -0.44
GTF3C1-206ENST00000566779 SCYL3Q8IZE3 742 aa12.31□□□□□ -0.44
GTF3C1-206ENST00000566779 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
GTF3C1-206ENST00000566779 HPS5Q9UPZ3 1129 aa12.31□□□□□ -0.44
GTF3C1-206ENST00000566779 ATRNL1Q5VV63 1379 aa12.3□□□□□ -0.44
GTF3C1-206ENST00000566779 LOC285556D6RIA3 1793 aa12.3□□□□□ -0.44
GTF3C1-206ENST00000566779 TRIM75PA6NK02 468 aa12.3□□□□□ -0.44
GTF3C1-206ENST00000566779 GOLIM4O00461 696 aa12.3□□□□□ -0.44
GTF3C1-206ENST00000566779 USP5P45974 858 aa12.3□□□□□ -0.44
GTF3C1-206ENST00000566779 PDE3AQ14432 1141 aa12.3□□□□□ -0.44
GTF3C1-206ENST00000566779 CRACR2BQ8N4Y2 399 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-206ENST00000566779 TMEM106CQ9BVX2 250 aa12.3□□□□□ -0.44
GTF3C1-206ENST00000566779 ZHX2Q9Y6X8 837 aa12.3□□□□□ -0.44
GTF3C1-206ENST00000566779 FLT1P17948 1338 aa12.3□□□□□ -0.44
GTF3C1-206ENST00000566779 DDX60LQ5H9U9 1706 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 TESPA1A2RU30 521 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 TULP1O00294 542 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 PDHXO00330 501 aa12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 SP3Q02447 781 aa12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 MAP3K12Q12852 859 aa12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 NOL9Q5SY16 702 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 EDC3Q96F86 508 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 ZNF512BQ96KM6 892 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 CFHR5Q9BXR6 569 aa12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 ZNF112Q9UJU3 913 aa12.29□□□□□ -0.44
GTF3C1-206ENST00000566779 COL2A1P02458 1487 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 PHF20L1A8MW92 1017 aa12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 PTPRAP18433 802 aa12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 PDE4AP27815 886 aa12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 FBXO46Q6PJ61 603 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 OTOP1Q7RTM1 612 aa12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 BOLA2Q9H3K6 86 aa12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 EFCC1Q9HA90 598 aa12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 CPA4Q9UI42 421 aa12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 PALD1Q9ULE6 856 aa12.28□□□□□ -0.44
GTF3C1-206ENST00000566779 CTNND1O60716 968 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 GDF11O95390 407 aa12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 MYCP01106 439 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-206ENST00000566779 HLA-DOAP06340 250 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms