RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CEP44Q9C0F1 390 aa4.87□□□□□ -1.63
SMG1-212ENST00000566328 PRDM5Q9NQX1 630 aaPredicted RBP4.87□□□□□ -1.63
SMG1-212ENST00000566328 GLI1P08151 1106 aa4.86□□□□□ -1.63
SMG1-212ENST00000566328 ZNF252P-AS1Q0IIN9 211 aa4.86□□□□□ -1.63
SMG1-212ENST00000566328 TMEM67Q5HYA8 995 aa4.86□□□□□ -1.63
SMG1-212ENST00000566328 SCARA3Q6AZY7 606 aa4.86□□□□□ -1.63
SMG1-212ENST00000566328 CYFIP1Q7L576 1253 aa4.86□□□□□ -1.63
SMG1-212ENST00000566328 SIAH1Q8IUQ4 282 aa4.86□□□□□ -1.63
SMG1-212ENST00000566328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.86□□□□□ -1.63
SMG1-212ENST00000566328 MAPK8IP1Q9UQF2 711 aa4.86□□□□□ -1.63
SMG1-212ENST00000566328 PITPNM2Q9BZ72 1349 aa4.86□□□□□ -1.63
SMG1-212ENST00000566328 TRIM37O94972 964 aa4.85□□□□□ -1.63
SMG1-212ENST00000566328 PDE4CQ08493 712 aa4.85□□□□□ -1.63
SMG1-212ENST00000566328 LRRC14Q15048 493 aa4.85□□□□□ -1.63
SMG1-212ENST00000566328 NKPD1Q17RQ9 610 aa4.85□□□□□ -1.63
SMG1-212ENST00000566328 PPM1JQ5JR12 505 aa4.85□□□□□ -1.63
SMG1-212ENST00000566328 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
SMG1-212ENST00000566328 SYDE1Q6ZW31 735 aaPredicted RBP4.85□□□□□ -1.63
SMG1-212ENST00000566328 STK35Q8TDR2 534 aa4.85□□□□□ -1.63
SMG1-212ENST00000566328 LIN37Q96GY3 246 aaPredicted RBP4.85□□□□□ -1.63
SMG1-212ENST00000566328 KIRREL1Q96J84 757 aa4.85□□□□□ -1.63
SMG1-212ENST00000566328 CACNA2D2Q9NY47 1150 aa4.85□□□□□ -1.63
SMG1-212ENST00000566328 FAM155AB1AL88 458 aaPredicted RBP4.84□□□□□ -1.63
SMG1-212ENST00000566328 NFIBO00712 420 aa4.84□□□□□ -1.63
SMG1-212ENST00000566328 CFPP27918 469 aa4.84□□□□□ -1.63
SMG1-212ENST00000566328 GSTT1P30711 240 aa4.84□□□□□ -1.63
SMG1-212ENST00000566328 NXPE4Q6UWF7 544 aa4.84□□□□□ -1.63
SMG1-212ENST00000566328 NPAS4Q8IUM7 802 aa4.84□□□□□ -1.63
SMG1-212ENST00000566328 LRRC56Q8IYG6 542 aaPredicted RBP4.84□□□□□ -1.63
SMG1-212ENST00000566328 ZNF507Q8TCN5 953 aa4.84□□□□□ -1.63
SMG1-212ENST00000566328 SRCIN1Q9C0H9 1055 aa4.84□□□□□ -1.63
SMG1-212ENST00000566328 CSADQ9Y600 493 aa4.84□□□□□ -1.63
SMG1-212ENST00000566328 LRIG2O94898 1065 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 NTF4P34130 210 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 GDNFP39905 211 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 RING1Q06587 406 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMG1-212ENST00000566328 ZBTB37Q5TC79 503 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 FYB2Q5VWT5 728 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 ZNF746Q6NUN9 644 aaPredicted RBP4.83□□□□□ -1.64
SMG1-212ENST00000566328 LLGL2Q6P1M3 1020 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 TXNDC2Q86VQ3 553 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 C12orf40Q86WS4 652 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 FBXO15Q8NCQ5 510 aaPredicted RBP4.83□□□□□ -1.64
SMG1-212ENST00000566328 ELMO3Q96BJ8 720 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 NECAB3Q96P71 396 aaPredicted RBP4.83□□□□□ -1.64
SMG1-212ENST00000566328 CARS2Q9HA77 564 aaKnown RBP4.83□□□□□ -1.64
SMG1-212ENST00000566328 PPM1HQ9ULR3 514 aa4.83□□□□□ -1.64
SMG1-212ENST00000566328 DCDC2CA8MYV0 355 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 EOMESO95936 686 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 PLCB3Q01970 1234 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 SFRP5Q5T4F7 317 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 PI16Q6UXB8 463 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 TPTE2Q6XPS3 522 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 PRR23BQ6ZRT6 265 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 C22orf34Q6ZV56 151 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 ARMCX6Q7L4S7 300 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 CILP2Q8IUL8 1156 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 MFSD4AQ8N468 514 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 HSPA12BQ96MM6 686 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 TPX2Q9ULW0 747 aaKnown RBP4.82□□□□□ -1.64
SMG1-212ENST00000566328 PCDHA4Q9UN74 947 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 CYP8B1Q9UNU6 501 aa4.82□□□□□ -1.64
SMG1-212ENST00000566328 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.81□□□□□ -1.64
SMG1-212ENST00000566328 TMEM253P0C7T8 217 aa4.81□□□□□ -1.64
SMG1-212ENST00000566328 ZSCAN22P10073 491 aaPredicted RBP4.81□□□□□ -1.64
SMG1-212ENST00000566328 RAC2P15153 192 aa4.81□□□□□ -1.64
SMG1-212ENST00000566328 BMP6P22004 513 aa4.81□□□□□ -1.64
SMG1-212ENST00000566328 CDKAL1Q5VV42 579 aa4.81□□□□□ -1.64
SMG1-212ENST00000566328 LILRA6Q6PI73 481 aa4.81□□□□□ -1.64
SMG1-212ENST00000566328 TMC7Q7Z402 723 aa4.81□□□□□ -1.64
SMG1-212ENST00000566328 THAP5Q7Z6K1 395 aa4.81□□□□□ -1.64
SMG1-212ENST00000566328 MFSD2AQ8NA29 543 aa4.81□□□□□ -1.64
SMG1-212ENST00000566328 ATP13A1Q9HD20 1204 aa4.81□□□□□ -1.64
SMG1-212ENST00000566328 PNMA6FA0A0J9YX94 578 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 ENC1O14682 589 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 GIPC1O14908 333 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 ZNF865P0CJ78 1059 aaPredicted RBP4.8□□□□□ -1.64
SMG1-212ENST00000566328 CYP7A1P22680 504 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 ENOX2Q16206 610 aaKnown RBP4.8□□□□□ -1.64
SMG1-212ENST00000566328 MPRIPQ6WCQ1 1025 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 HDXQ7Z353 690 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 C3orf58Q8NDZ4 430 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 GRIN3AQ8TCU5 1115 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 FBF1Q8TES7 1133 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 COX4I2Q96KJ9 171 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 NSUN3Q9H649 340 aaKnown RBP4.8□□□□□ -1.64
SMG1-212ENST00000566328 C1orf115Q9H7X2 142 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 SEMA3GQ9NS98 782 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 RAPGEFL1Q9UHV5 662 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 DCTN4Q9UJW0 460 aa4.8□□□□□ -1.64
SMG1-212ENST00000566328 SLITRK5O94991 958 aa4.79□□□□□ -1.64
SMG1-212ENST00000566328 C1QTNF9P0C862 333 aa4.79□□□□□ -1.64
SMG1-212ENST00000566328 CAP2P40123 477 aa4.79□□□□□ -1.64
SMG1-212ENST00000566328 LCNL1Q6ZST4 164 aa4.79□□□□□ -1.64
SMG1-212ENST00000566328 UBE3DQ7Z6J8 389 aa4.79□□□□□ -1.64
SMG1-212ENST00000566328 C1QL4Q86Z23 238 aa4.79□□□□□ -1.64
SMG1-212ENST00000566328 ANKRD24Q8TF21 1146 aa4.79□□□□□ -1.64
SMG1-212ENST00000566328 ALPK1Q96QP1 1244 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms