RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 FAM196BA6NMK8 535 aa24.27■■□□□ 1.48
CLN6-206ENST00000565471 PRMT2P55345 433 aa24.27■■□□□ 1.48
CLN6-206ENST00000565471 TMED8Q6PL24 325 aaPredicted RBP24.27■■□□□ 1.48
CLN6-206ENST00000565471 RHPN1Q8TCX5 695 aa24.27■■□□□ 1.48
CLN6-206ENST00000565471 PI4KBQ9UBF8 816 aa24.27■■□□□ 1.48
CLN6-206ENST00000565471 CDK5RAP2Q96SN8 1893 aa24.27■■□□□ 1.48
CLN6-206ENST00000565471 CERS3Q8IU89 383 aa24.26■■□□□ 1.47
CLN6-206ENST00000565471 TGFBRAP1Q8WUH2 860 aa24.26■■□□□ 1.47
CLN6-206ENST00000565471 TBC1D2Q9BYX2 928 aa24.26■■□□□ 1.47
CLN6-206ENST00000565471 FLT1P17948 1338 aa24.26■■□□□ 1.47
CLN6-206ENST00000565471 IDH1O75874 414 aaKnown RBP24.25■■□□□ 1.47
CLN6-206ENST00000565471 CAP2P40123 477 aa24.25■■□□□ 1.47
CLN6-206ENST00000565471 NBPF11Q86T75 865 aa24.25■■□□□ 1.47
CLN6-206ENST00000565471 KIF1BPQ96EK5 621 aa24.25■■□□□ 1.47
CLN6-206ENST00000565471 IL1RAPL2Q9NP60 686 aa24.25■■□□□ 1.47
CLN6-206ENST00000565471 SIPA1L1O43166 1804 aa24.25■■□□□ 1.47
CLN6-206ENST00000565471 ATAD5Q96QE3 1844 aa24.24■■□□□ 1.47
CLN6-206ENST00000565471 TRIM75PA6NK02 468 aa24.24■■□□□ 1.47
CLN6-206ENST00000565471 TNRC18O15417 2968 aaPredicted RBP24.24■■□□□ 1.47
CLN6-206ENST00000565471 CYP2C8P10632 490 aa24.24■■□□□ 1.47
CLN6-206ENST00000565471 BCRP11274 1271 aa24.24■■□□□ 1.47
CLN6-206ENST00000565471 CYP7A1P22680 504 aa24.24■■□□□ 1.47
CLN6-206ENST00000565471 SLC9C1Q4G0N8 1177 aa24.24■■□□□ 1.47
CLN6-206ENST00000565471 GADL1Q6ZQY3 521 aa24.24■■□□□ 1.47
CLN6-206ENST00000565471 MAPKAPK5Q8IW41 473 aa24.24■■□□□ 1.47
CLN6-206ENST00000565471 SIRT2Q8IXJ6 389 aa24.24■■□□□ 1.47
CLN6-206ENST00000565471 ZNF333Q96JL9 665 aa24.24■■□□□ 1.47
CLN6-206ENST00000565471 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.24■■□□□ 1.47
CLN6-206ENST00000565471 PSMC4P43686 418 aa24.23■■□□□ 1.47
CLN6-206ENST00000565471 MAP3K12Q12852 859 aa24.23■■□□□ 1.47
CLN6-206ENST00000565471 CCDC84Q86UT8 332 aaPredicted RBP24.23■■□□□ 1.47
CLN6-206ENST00000565471 METTL16Q86W50 562 aaKnown RBP24.23■■□□□ 1.47
CLN6-206ENST00000565471 FOXP4Q8IVH2 680 aaPredicted RBP24.23■■□□□ 1.47
CLN6-206ENST00000565471 CLASRPQ8N2M8 674 aaKnown RBP24.23■■□□□ 1.47
CLN6-206ENST00000565471 POTEFA5A3E0 1075 aa24.22■■□□□ 1.47
CLN6-206ENST00000565471 HOXD10P28358 340 aa24.22■■□□□ 1.47
CLN6-206ENST00000565471 CTGFP29279 349 aa24.22■■□□□ 1.47
CLN6-206ENST00000565471 RRP1BQ14684 758 aaKnown RBP24.22■■□□□ 1.47
CLN6-206ENST00000565471 MAGEB6Q8N7X4 407 aa24.22■■□□□ 1.47
CLN6-206ENST00000565471 TRIM47Q96LD4 638 aa24.22■■□□□ 1.47
CLN6-206ENST00000565471 ANTXR1Q9H6X2 564 aa24.22■■□□□ 1.47
CLN6-206ENST00000565471 AGTPBP1Q9UPW5 1226 aa24.22■■□□□ 1.47
CLN6-206ENST00000565471 PDE4DIPQ5VU43 2346 aa24.22■■□□□ 1.47
CLN6-206ENST00000565471 RAB11FIP3O75154 756 aa24.21■■□□□ 1.47
CLN6-206ENST00000565471 DYNLL1P63167 89 aaKnown RBP24.21■■□□□ 1.47
CLN6-206ENST00000565471 PDE3AQ14432 1141 aa24.21■■□□□ 1.47
CLN6-206ENST00000565471 PROCA1Q8NCQ7 364 aaPredicted RBP24.21■■□□□ 1.47
CLN6-206ENST00000565471 ZNF280CQ8ND82 737 aa24.21■■□□□ 1.47
CLN6-206ENST00000565471 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.21■■□□□ 1.47
CLN6-206ENST00000565471 SRRDQ9UH36 339 aa24.21■■□□□ 1.47
CLN6-206ENST00000565471 NDUFB9Q9Y6M9 179 aa24.21■■□□□ 1.47
CLN6-206ENST00000565471 USP17L5A8MUK1 530 aa24.2■■□□□ 1.46
CLN6-206ENST00000565471 SPP2Q13103 211 aa24.2■■□□□ 1.46
CLN6-206ENST00000565471 TTF1Q15361 905 aaPredicted RBP24.2■■□□□ 1.46
CLN6-206ENST00000565471 TMEM106CQ9BVX2 250 aa24.2■■□□□ 1.46
CLN6-206ENST00000565471 DNAJC18Q9H819 358 aa24.2■■□□□ 1.46
CLN6-206ENST00000565471 AS3MTQ9HBK9 375 aa24.2■■□□□ 1.46
CLN6-206ENST00000565471 PALD1Q9ULE6 856 aa24.2■■□□□ 1.46
CLN6-206ENST00000565471 LOC285556D6RIA3 1793 aa24.2■■□□□ 1.46
CLN6-206ENST00000565471 FMNL1O95466 1100 aaPredicted RBP24.19■■□□□ 1.46
CLN6-206ENST00000565471 OSBPP22059 807 aa24.19■■□□□ 1.46
CLN6-206ENST00000565471 CRACR2BQ8N4Y2 399 aaPredicted RBP24.19■■□□□ 1.46
CLN6-206ENST00000565471 GINM1Q9NU53 330 aa24.19■■□□□ 1.46
CLN6-206ENST00000565471 HLA-DOAP06340 250 aa24.18■■□□□ 1.46
CLN6-206ENST00000565471 ASNSP08243 561 aa24.18■■□□□ 1.46
CLN6-206ENST00000565471 IFIT2P09913 472 aaKnown RBP24.18■■□□□ 1.46
CLN6-206ENST00000565471 FCGRTP55899 365 aa24.18■■□□□ 1.46
CLN6-206ENST00000565471 MIGA1Q8NAN2 632 aa24.18■■□□□ 1.46
CLN6-206ENST00000565471 SMCR8Q8TEV9 937 aaPredicted RBP24.18■■□□□ 1.46
CLN6-206ENST00000565471 TRIM34Q9BYJ4 488 aa24.18■■□□□ 1.46
CLN6-206ENST00000565471 PNMA3Q9UL41 463 aa24.18■■□□□ 1.46
CLN6-206ENST00000565471 KIAA0100Q14667 2235 aaKnown RBP24.18■■□□□ 1.46
CLN6-206ENST00000565471 APBB1O00213 710 aa24.17■■□□□ 1.46
CLN6-206ENST00000565471 SH3D19Q5HYK7 790 aa24.17■■□□□ 1.46
CLN6-206ENST00000565471 TREML2Q5T2D2 321 aa24.17■■□□□ 1.46
CLN6-206ENST00000565471 WDR18Q9BV38 432 aa24.17■■□□□ 1.46
CLN6-206ENST00000565471 MGAMO43451 1857 aa24.17■■□□□ 1.46
CLN6-206ENST00000565471 MYPNQ86TC9 1320 aa24.16■■□□□ 1.46
CLN6-206ENST00000565471 ECM2O94769 699 aaPredicted RBP24.16■■□□□ 1.46
CLN6-206ENST00000565471 USP5P45974 858 aa24.16■■□□□ 1.46
CLN6-206ENST00000565471 SH3TC2Q8TF17 1288 aa24.16■■□□□ 1.46
CLN6-206ENST00000565471 SAP30BPQ9UHR5 308 aaKnown RBP24.16■■□□□ 1.46
CLN6-206ENST00000565471 MYH1P12882 1939 aa24.16■■□□□ 1.46
CLN6-206ENST00000565471 HMGCS2P54868 508 aa24.15■■□□□ 1.46
CLN6-206ENST00000565471 PABPC4Q13310 644 aaKnown RBP eCLIP24.15■■□□□ 1.461e-8■□□□□ 10.2
CLN6-206ENST00000565471 C20orf194Q5TEA3 1177 aa24.15■■□□□ 1.46
CLN6-206ENST00000565471 PRPF38BQ5VTL8 546 aaKnown RBP24.15■■□□□ 1.46
CLN6-206ENST00000565471 RAET1EQ8TD07 263 aa24.15■■□□□ 1.46
CLN6-206ENST00000565471 RIOK1Q9BRS2 568 aaKnown RBP24.15■■□□□ 1.46
CLN6-206ENST00000565471 EN2P19622 333 aaPredicted RBP24.14■■□□□ 1.45
CLN6-206ENST00000565471 EHD4Q9H223 541 aa24.14■■□□□ 1.45
CLN6-206ENST00000565471 PDE6AP16499 860 aa24.13■■□□□ 1.45
CLN6-206ENST00000565471 BACE1P56817 501 aa24.13■■□□□ 1.45
CLN6-206ENST00000565471 JAG1P78504 1218 aa24.13■■□□□ 1.45
CLN6-206ENST00000565471 SLC4A8Q2Y0W8 1093 aa24.13■■□□□ 1.45
CLN6-206ENST00000565471 ZBTB21Q9ULJ3 1066 aa24.13■■□□□ 1.45
CLN6-206ENST00000565471 MAGEB6P1A0A0J9YX57 407 aa24.12■■□□□ 1.45
CLN6-206ENST00000565471 GRK4P32298 578 aa24.12■■□□□ 1.45
CLN6-206ENST00000565471 GCLCP48506 637 aaPredicted RBP24.12■■□□□ 1.45
CLN6-206ENST00000565471 PRKCZQ05513 592 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms