RNA–Protein interactions for RNA: ENST00000565345.5

SCAMP2-206, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-206ENST00000565345 SIPA1L1O43166 1804 aa23.16■■□□□ 1.3
SCAMP2-206ENST00000565345 PTPRFP10586 1907 aa23.16■■□□□ 1.3
SCAMP2-206ENST00000565345 FLT1P17948 1338 aa23.15■■□□□ 1.3
SCAMP2-206ENST00000565345 ADGRA2Q96PE1 1338 aa23.15■■□□□ 1.3
SCAMP2-206ENST00000565345 MAP3K12Q12852 859 aa23.15■■□□□ 1.3
SCAMP2-206ENST00000565345 TTF1Q15361 905 aaPredicted RBP23.15■■□□□ 1.3
SCAMP2-206ENST00000565345 GPAT2Q6NUI2 795 aa23.15■■□□□ 1.3
SCAMP2-206ENST00000565345 METTL16Q86W50 562 aaKnown RBP23.15■■□□□ 1.3
SCAMP2-206ENST00000565345 TGFBRAP1Q8WUH2 860 aa23.15■■□□□ 1.3
SCAMP2-206ENST00000565345 CAP2P40123 477 aa23.14■■□□□ 1.29
SCAMP2-206ENST00000565345 SOX10P56693 466 aa23.14■■□□□ 1.29
SCAMP2-206ENST00000565345 TBC1D2Q9BYX2 928 aa23.14■■□□□ 1.29
SCAMP2-206ENST00000565345 SLC45A1Q9Y2W3 748 aa23.14■■□□□ 1.29
SCAMP2-206ENST00000565345 NDUFB9Q9Y6M9 179 aa23.14■■□□□ 1.29
SCAMP2-206ENST00000565345 FAM196BA6NMK8 535 aa23.13■■□□□ 1.29
SCAMP2-206ENST00000565345 IFIT2P09913 472 aaKnown RBP23.13■■□□□ 1.29
SCAMP2-206ENST00000565345 LACTBP83111 547 aaPredicted RBP23.13■■□□□ 1.29
SCAMP2-206ENST00000565345 FOXP4Q8IVH2 680 aaPredicted RBP23.13■■□□□ 1.29
SCAMP2-206ENST00000565345 MAPKAPK5Q8IW41 473 aa23.13■■□□□ 1.29
SCAMP2-206ENST00000565345 MAGEB6Q8N7X4 407 aa23.13■■□□□ 1.29
SCAMP2-206ENST00000565345 ATAD5Q96QE3 1844 aa23.12■■□□□ 1.29
SCAMP2-206ENST00000565345 APBB1O00213 710 aa23.12■■□□□ 1.29
SCAMP2-206ENST00000565345 GNRH1P01148 92 aa23.12■■□□□ 1.29
SCAMP2-206ENST00000565345 DYNLL1P63167 89 aaKnown RBP23.12■■□□□ 1.29
SCAMP2-206ENST00000565345 PARK7Q99497 189 aaKnown RBP23.12■■□□□ 1.29
SCAMP2-206ENST00000565345 KIF22Q14807 665 aa23.11■■□□□ 1.29
SCAMP2-206ENST00000565345 RRP1BQ14684 758 aaKnown RBP23.1■■□□□ 1.29
SCAMP2-206ENST00000565345 ARMC5Q96C12 935 aa23.1■■□□□ 1.29
SCAMP2-206ENST00000565345 GINM1Q9NU53 330 aa23.1■■□□□ 1.29
SCAMP2-206ENST00000565345 TRIM75PA6NK02 468 aa23.09■■□□□ 1.29
SCAMP2-206ENST00000565345 PRMT2P55345 433 aa23.09■■□□□ 1.29
SCAMP2-206ENST00000565345 MIGA1Q8NAN2 632 aa23.09■■□□□ 1.29
SCAMP2-206ENST00000565345 PROCA1Q8NCQ7 364 aaPredicted RBP23.09■■□□□ 1.29
SCAMP2-206ENST00000565345 DNAJC18Q9H819 358 aa23.09■■□□□ 1.29
SCAMP2-206ENST00000565345 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.09■■□□□ 1.29
SCAMP2-206ENST00000565345 CPA4Q9UI42 421 aa23.09■■□□□ 1.29
SCAMP2-206ENST00000565345 PALD1Q9ULE6 856 aa23.09■■□□□ 1.29
SCAMP2-206ENST00000565345 MYH1P12882 1939 aa23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 USP17L5A8MUK1 530 aa23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 HLA-DOAP06340 250 aa23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 BCRP11274 1271 aa23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 ATP5JP18859 108 aa23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 GADL1Q6ZQY3 521 aa23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 CCDC84Q86UT8 332 aaPredicted RBP23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 ZNF280CQ8ND82 737 aa23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 RIOK1Q9BRS2 568 aaKnown RBP23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 LRRCC1Q9C099 1032 aa23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 LOC285556D6RIA3 1793 aa23.08■■□□□ 1.29
SCAMP2-206ENST00000565345 ARHGAP39Q9C0H5 1083 aa23.07■■□□□ 1.28
SCAMP2-206ENST00000565345 AS3MTQ9HBK9 375 aa23.07■■□□□ 1.28
SCAMP2-206ENST00000565345 AGTPBP1Q9UPW5 1226 aa23.07■■□□□ 1.28
SCAMP2-206ENST00000565345 ZSWIM8A7E2V4 1837 aa23.07■■□□□ 1.28
SCAMP2-206ENST00000565345 RBBP6Q7Z6E9 1792 aaKnown RBP23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 GOLIM4O00461 696 aa23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 ASNSP08243 561 aa23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 CYP2C8P10632 490 aa23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 PDE6AP16499 860 aa23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 SPP2Q13103 211 aa23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 SH3D19Q5HYK7 790 aa23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 SLC9C2Q5TAH2 1124 aa23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 CRACR2BQ8N4Y2 399 aaPredicted RBP23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 DNAJC2Q99543 621 aaKnown RBP23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 WDR18Q9BV38 432 aa23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 EHD4Q9H223 541 aa23.06■■□□□ 1.28
SCAMP2-206ENST00000565345 USP5P45974 858 aa23.05■■□□□ 1.28
SCAMP2-206ENST00000565345 TRIM34Q9BYJ4 488 aa23.05■■□□□ 1.28
SCAMP2-206ENST00000565345 DCTPP1Q9H773 170 aa23.05■■□□□ 1.28
SCAMP2-206ENST00000565345 SAP30BPQ9UHR5 308 aaKnown RBP23.05■■□□□ 1.28
SCAMP2-206ENST00000565345 PTCH2Q9Y6C5 1203 aa23.05■■□□□ 1.28
SCAMP2-206ENST00000565345 HTTP42858 3142 aa23.04■■□□□ 1.28
SCAMP2-206ENST00000565345 MAGEB6P1A0A0J9YX57 407 aa23.04■■□□□ 1.28
SCAMP2-206ENST00000565345 TCRBV5S4A2TA0A5A2 114 aa23.04■■□□□ 1.28
SCAMP2-206ENST00000565345 CTGFP29279 349 aa23.04■■□□□ 1.28
SCAMP2-206ENST00000565345 HAUS7Q99871 368 aa23.04■■□□□ 1.28
SCAMP2-206ENST00000565345 PAG1Q9NWQ8 432 aa23.04■■□□□ 1.28
SCAMP2-206ENST00000565345 DDX60LQ5H9U9 1706 aaKnown RBP23.04■■□□□ 1.28
SCAMP2-206ENST00000565345 ZNF532Q9HCE3 1301 aa23.04■■□□□ 1.28
SCAMP2-206ENST00000565345 PSMC4P43686 418 aa23.03■■□□□ 1.28
SCAMP2-206ENST00000565345 TATDN1Q6P1N9 297 aa23.03■■□□□ 1.28
SCAMP2-206ENST00000565345 NBPF11Q86T75 865 aa23.03■■□□□ 1.28
SCAMP2-206ENST00000565345 TTC6Q86TZ1 520 aa23.03■■□□□ 1.28
SCAMP2-206ENST00000565345 ZNF333Q96JL9 665 aa23.03■■□□□ 1.28
SCAMP2-206ENST00000565345 TRIM47Q96LD4 638 aa23.03■■□□□ 1.28
SCAMP2-206ENST00000565345 BOLA2Q9H3K6 86 aa23.03■■□□□ 1.28
SCAMP2-206ENST00000565345 PNMA3Q9UL41 463 aa23.03■■□□□ 1.28
SCAMP2-206ENST00000565345 HOXD10P28358 340 aa23.02■■□□□ 1.28
SCAMP2-206ENST00000565345 JAG1P78504 1218 aa23.02■■□□□ 1.28
SCAMP2-206ENST00000565345 PABPC4Q13310 644 aaKnown RBP eCLIP23.02■■□□□ 1.28
SCAMP2-206ENST00000565345 SLC9C1Q4G0N8 1177 aa23.02■■□□□ 1.28
SCAMP2-206ENST00000565345 TREML2Q5T2D2 321 aa23.02■■□□□ 1.28
SCAMP2-206ENST00000565345 SRRDQ9UH36 339 aa23.02■■□□□ 1.28
SCAMP2-206ENST00000565345 SERPINB13Q9UIV8 391 aa23.02■■□□□ 1.28
SCAMP2-206ENST00000565345 ZBTB21Q9ULJ3 1066 aa23.02■■□□□ 1.28
SCAMP2-206ENST00000565345 MGAMO43451 1857 aa23.01■■□□□ 1.27
SCAMP2-206ENST00000565345 HMGCS2P54868 508 aa23.01■■□□□ 1.27
SCAMP2-206ENST00000565345 BACE1P56817 501 aa23.01■■□□□ 1.27
SCAMP2-206ENST00000565345 SMCR8Q8TEV9 937 aaPredicted RBP23.01■■□□□ 1.27
SCAMP2-206ENST00000565345 EDC3Q96F86 508 aaKnown RBP23.01■■□□□ 1.27
SCAMP2-206ENST00000565345 CRNKL1Q9BZJ0 848 aaKnown RBP23.01■■□□□ 1.27
SCAMP2-206ENST00000565345 C19orf81C9J6K1 198 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms