RNA–Protein interactions for RNA: ENST00000564969.5

FANCA-217, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 850 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-217ENST00000564969 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
FANCA-217ENST00000564969 CCDC88AQ3V6T2 1871 aa13.37□□□□□ -0.27
FANCA-217ENST00000564969 MYO5AQ9Y4I1 1855 aaKnown RBP13.37□□□□□ -0.27
FANCA-217ENST00000564969 MYH7P12883 1935 aa13.37□□□□□ -0.27
FANCA-217ENST00000564969 WDR19Q8NEZ3 1342 aa13.37□□□□□ -0.27
FANCA-217ENST00000564969 ZNF646O15015 1829 aaPredicted RBP13.36□□□□□ -0.27
FANCA-217ENST00000564969 SRCAPQ6ZRS2 3230 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 ROBO3Q96MS0 1386 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 EPHX2P34913 555 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 MCM2P49736 904 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 GABPAQ06546 454 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 RASA3Q14644 834 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 C16orf86Q6ZW13 317 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 PNMA8AQ86V59 439 aaPredicted RBP13.36□□□□□ -0.27
FANCA-217ENST00000564969 METTL16Q86W50 562 aaKnown RBP13.36□□□□□ -0.27
FANCA-217ENST00000564969 MB21D2Q8IYB1 491 aaPredicted RBP13.36□□□□□ -0.27
FANCA-217ENST00000564969 ZNF444Q8N0Y2 327 aaPredicted RBP13.36□□□□□ -0.27
FANCA-217ENST00000564969 FBXL16Q8N461 479 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 ESR2Q92731 530 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 UPF3BQ9BZI7 483 aaKnown RBP13.36□□□□□ -0.27
FANCA-217ENST00000564969 MKNK2Q9HBH9 465 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 TOMM22Q9NS69 142 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 PDRG1Q9NUG6 133 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 PITPNM2Q9BZ72 1349 aa13.36□□□□□ -0.27
FANCA-217ENST00000564969 COL2A1P02458 1487 aaPredicted RBP13.36□□□□□ -0.27
FANCA-217ENST00000564969 CNTNAP1P78357 1384 aa13.35□□□□□ -0.27
FANCA-217ENST00000564969 DDTLA6NHG4 134 aaPredicted RBP13.35□□□□□ -0.27
FANCA-217ENST00000564969 CDK8P49336 464 aa13.35□□□□□ -0.27
FANCA-217ENST00000564969 ANKRD1Q15327 319 aa13.35□□□□□ -0.27
FANCA-217ENST00000564969 ANGEL2Q5VTE6 544 aaKnown RBP13.35□□□□□ -0.27
FANCA-217ENST00000564969 SH3BP5LQ7L8J4 393 aa13.35□□□□□ -0.27
FANCA-217ENST00000564969 DYNLL2Q96FJ2 89 aa13.35□□□□□ -0.27
FANCA-217ENST00000564969 DEFB129Q9H1M3 183 aa13.35□□□□□ -0.27
FANCA-217ENST00000564969 TAF1DQ9H5J8 278 aaPredicted RBP13.35□□□□□ -0.27
FANCA-217ENST00000564969 INCENPQ9NQS7 918 aa13.35□□□□□ -0.27
FANCA-217ENST00000564969 PGAP2Q9UHJ9 254 aa13.35□□□□□ -0.27
FANCA-217ENST00000564969 PPP2R3BQ9Y5P8 575 aa13.35□□□□□ -0.27
FANCA-217ENST00000564969 TACC3Q9Y6A5 838 aa13.35□□□□□ -0.27
FANCA-217ENST00000564969 GOLGB1Q14789 3259 aaKnown RBP13.34□□□□□ -0.27
FANCA-217ENST00000564969 SBF1O95248 1867 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 POTECB2RU33 542 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 B4E1Z4 1266 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 SMIM22K7EJ46 135 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 TBC1D12O60347 775 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 RANBP6O60518 1105 aaKnown RBP13.34□□□□□ -0.27
FANCA-217ENST00000564969 KDM4AO75164 1064 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 VEGFAP15692 232 aaPredicted RBP13.34□□□□□ -0.27
FANCA-217ENST00000564969 BECN1Q14457 450 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 CCDC178Q5BJE1 867 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 RRP12Q5JTH9 1297 aaKnown RBP13.34□□□□□ -0.27
FANCA-217ENST00000564969 STK11IPQ8N1F8 1099 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 CRACR2BQ8N4Y2 399 aaPredicted RBP13.34□□□□□ -0.27
FANCA-217ENST00000564969 DCPSQ96C86 337 aaKnown RBP13.34□□□□□ -0.27
FANCA-217ENST00000564969 HOOK2Q96ED9 719 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 TTC14Q96N46 770 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 CSRNP1Q96S65 589 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 TRIM34Q9BYJ4 488 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 ZSWIM5Q9P217 1185 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 HERC5Q9UII4 1024 aaKnown RBP13.34□□□□□ -0.27
FANCA-217ENST00000564969 MYH2Q9UKX2 1941 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 DICER1Q9UPY3 1922 aaKnown RBP13.34□□□□□ -0.27
FANCA-217ENST00000564969 NEDD4P46934 1319 aa13.34□□□□□ -0.27
FANCA-217ENST00000564969 PRC1O43663 620 aa13.33□□□□□ -0.28
FANCA-217ENST00000564969 PRDM1O75626 825 aa13.33□□□□□ -0.28
FANCA-217ENST00000564969 CPA1P15085 419 aa13.33□□□□□ -0.28
FANCA-217ENST00000564969 FGD1P98174 961 aa13.33□□□□□ -0.28
FANCA-217ENST00000564969 MAP3K10Q02779 954 aa13.33□□□□□ -0.28
FANCA-217ENST00000564969 EVX2Q03828 476 aa13.33□□□□□ -0.28
FANCA-217ENST00000564969 SART3Q15020 963 aaKnown RBP13.33□□□□□ -0.28
FANCA-217ENST00000564969 SLC4A8Q2Y0W8 1093 aa13.33□□□□□ -0.28
FANCA-217ENST00000564969 CCDC17Q96LX7 622 aa13.33□□□□□ -0.28
FANCA-217ENST00000564969 TMEM39BQ9GZU3 492 aa13.33□□□□□ -0.28
FANCA-217ENST00000564969 ASTN2O75129 1339 aaPredicted RBP13.33□□□□□ -0.28
FANCA-217ENST00000564969 RASA1P20936 1047 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 TFAP4Q01664 338 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 TATDN1Q6P1N9 297 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 Q6ZUG5 572 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 CYB5R4Q7L1T6 521 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 IQCA1Q86XH1 822 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 HSCBQ8IWL3 235 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 SULF1Q8IWU6 871 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 TMTC2Q8N394 836 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 TEPSINQ96N21 525 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 AGXT2Q9BYV1 514 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 TCP11L1Q9NUJ3 509 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 GGA3Q9NZ52 723 aa13.32□□□□□ -0.28
FANCA-217ENST00000564969 ERICH2A1L162 156 aa13.31□□□□□ -0.28
FANCA-217ENST00000564969 TSPY2A6NKD2 308 aa13.31□□□□□ -0.28
FANCA-217ENST00000564969 IFIT3O14879 490 aaKnown RBP13.31□□□□□ -0.28
FANCA-217ENST00000564969 TSPY3P0CV98 308 aa13.31□□□□□ -0.28
FANCA-217ENST00000564969 TSPY8P0CW00 308 aa13.31□□□□□ -0.28
FANCA-217ENST00000564969 SHMT1P34896 483 aa13.31□□□□□ -0.28
FANCA-217ENST00000564969 LIFRP42702 1097 aa13.31□□□□□ -0.28
FANCA-217ENST00000564969 AK2P54819 239 aa13.31□□□□□ -0.28
FANCA-217ENST00000564969 ANTXR2P58335 489 aa13.31□□□□□ -0.28
FANCA-217ENST00000564969 SUPT20HL1Q3ZLR7 823 aa13.31□□□□□ -0.28
FANCA-217ENST00000564969 SLC44A5Q8NCS7 719 aa13.31□□□□□ -0.28
FANCA-217ENST00000564969 NEDD1Q8NHV4 660 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms