RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 NBPF15Q8N660 670 aa23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CWC15Q9P013 229 aaKnown RBP23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CCDC151A5D8V7 595 aa23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 AKAP17AQ02040 695 aaKnown RBP23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CTDSPL2Q05D32 466 aa23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 SRLQ86TD4 932 aa23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 NOA1Q8NC60 698 aaKnown RBP23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CWC25Q9NXE8 425 aaPredicted RBP23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 MED1Q15648 1581 aaPredicted RBP23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 LTN1O94822 1766 aa23.37■■□□□ 1.33
MAP1LC3B-206ENST00000564844 ENC1O14682 589 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 ZBTB43O43298 467 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 GOLGA5Q8TBA6 731 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 RIN2Q8WYP3 895 aaPredicted RBP23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 FAM89AQ96GI7 184 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 ADGRG1Q9Y653 693 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CCDC57Q2TAC2 916 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 MUM1L1Q5H9M0 696 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 TMEM67Q5HYA8 995 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 FAM205CA6NFA0 338 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CPLX2Q6PUV4 134 aaKnown RBP23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 NUP133Q8WUM0 1156 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 EXOC4Q96A65 974 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 TRIM10Q9UDY6 481 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 MAPK8IP1Q9UQF2 711 aa23.36■■□□□ 1.33
MAP1LC3B-206ENST00000564844 ATP8B1O43520 1251 aa23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 PPP6R2O75170 966 aa23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 PHKG2P15735 406 aa23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 TATP17735 454 aaPredicted RBP23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 DHX8Q14562 1220 aaKnown RBP23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 DIS3L2Q8IYB7 885 aaKnown RBP23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 PLBD2Q8NHP8 589 aa23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 UBR1Q8IWV7 1749 aa23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 PES1O00541 588 aaKnown RBP23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 TOB1P50616 345 aaPredicted RBP23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 FCHSD1Q86WN1 690 aa23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 OXER1Q8TDS5 423 aa23.35■■□□□ 1.33
MAP1LC3B-206ENST00000564844 UBN2Q6ZU65 1347 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 KRT28Q7Z3Y7 464 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 SLIT1O75093 1534 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 KAT6BQ8WYB5 2073 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 GOLGA6L9A6NEM1 432 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 HDXQ7Z353 690 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 EPSTI1Q96J88 318 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CDC23Q9UJX2 597 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 FXR1P51114 621 aaKnown RBP eCLIP23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 MDM2Q00987 491 aaPredicted RBP23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 APPBP2Q92624 585 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 EEF2KMTQ96G04 330 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 SLF1Q9BQI6 1058 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 VPS16Q9H269 839 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CABP5Q9NP86 173 aa23.34■■□□□ 1.33
MAP1LC3B-206ENST00000564844 ZMYM6O95789 1325 aa23.33■■□□□ 1.33
MAP1LC3B-206ENST00000564844 H7C1W4 665 aa23.33■■□□□ 1.33
MAP1LC3B-206ENST00000564844 IFIT3O14879 490 aaKnown RBP23.33■■□□□ 1.33
MAP1LC3B-206ENST00000564844 CD44P16070 742 aaKnown RBP23.33■■□□□ 1.33
MAP1LC3B-206ENST00000564844 GPTP24298 496 aa23.33■■□□□ 1.33
MAP1LC3B-206ENST00000564844 HOOK1Q9UJC3 728 aaKnown RBP23.33■■□□□ 1.33
MAP1LC3B-206ENST00000564844 SNAP23O00161 211 aa23.33■■□□□ 1.32
MAP1LC3B-206ENST00000564844 ZNF18P17022 549 aa23.33■■□□□ 1.32
MAP1LC3B-206ENST00000564844 HSP90B2PQ58FF3 399 aa23.33■■□□□ 1.32
MAP1LC3B-206ENST00000564844 NUTM2AQ8IVF1 878 aaPredicted RBP23.33■■□□□ 1.32
MAP1LC3B-206ENST00000564844 CAPZA3Q96KX2 299 aa23.33■■□□□ 1.32
MAP1LC3B-206ENST00000564844 HDAC6Q9UBN7 1215 aa23.33■■□□□ 1.32
MAP1LC3B-206ENST00000564844 RNF225M0QZC1 329 aaPredicted RBP23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 MAP2K7O14733 419 aa23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 CASP8Q14790 479 aa23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 NR1I3Q14994 352 aa23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 FKBP15Q5T1M5 1219 aa23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 GPIHBP1Q8IV16 184 aa23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 GSPT2Q8IYD1 628 aaKnown RBP23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 CSRNP2Q9H175 543 aa23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 HELBQ8NG08 1087 aaPredicted RBP23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 TSPYL1Q9H0U9 437 aa23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 GUCA1BQ9UMX6 200 aa23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 AKAP2Q9Y2D5 859 aa23.32■■□□□ 1.32
MAP1LC3B-206ENST00000564844 CTAGE9A4FU28 777 aa23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 LRRIQ3A6PVS8 624 aaPredicted RBP23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 SRGAP2O75044 1071 aa23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 MRPS25P82663 173 aaKnown RBP23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 NOSTRINQ8IVI9 506 aa23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 RFX7Q2KHR2 1363 aa23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 CYP27B1O15528 508 aa23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 SSRP1Q08945 709 aaKnown RBP23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 BRD3Q15059 726 aa23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 BLZF1Q9H2G9 400 aa23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 SLC12A7Q9Y666 1083 aa23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 SH2B2O14492 632 aaPredicted RBP23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 FAM217BQ9NTX9 383 aaPredicted RBP23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 L1RE1Q9UN81 338 aa23.31■■□□□ 1.32
MAP1LC3B-206ENST00000564844 SLC20A2Q08357 652 aa23.3■■□□□ 1.32
MAP1LC3B-206ENST00000564844 FAM204AQ9H8W3 233 aa23.3■■□□□ 1.32
MAP1LC3B-206ENST00000564844 MCAMP43121 646 aa23.3■■□□□ 1.32
MAP1LC3B-206ENST00000564844 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 ENOX1Q8TC92 643 aaKnown RBP23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 KDM6AO15550 1401 aaPredicted RBP23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 BAZ2BQ9UIF8 2168 aaKnown RBP23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 CDKL5O76039 1030 aa23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 A0A087X0B3 334 aa23.29■■□□□ 1.32
MAP1LC3B-206ENST00000564844 CTAGE15A4D2H0 777 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms