RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 MEGF11A6BM72 1044 aa7.21□□□□□ -1.25
LINC00560-201ENST00000564593 ID3Q02535 119 aa7.21□□□□□ -1.25
LINC00560-201ENST00000564593 ANAPC16Q96DE5 110 aa7.21□□□□□ -1.25
LINC00560-201ENST00000564593 CRBNQ96SW2 442 aa7.21□□□□□ -1.25
LINC00560-201ENST00000564593 ZNF408Q9H9D4 720 aa7.21□□□□□ -1.25
LINC00560-201ENST00000564593 GOLGA2P5Q9HBQ8 144 aa7.21□□□□□ -1.25
LINC00560-201ENST00000564593 SYNGAP1Q96PV0 1343 aa7.21□□□□□ -1.26
LINC00560-201ENST00000564593 PRAMEF27A3QJZ7 478 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 ETFBP38117 255 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 EIF6P56537 245 aaKnown RBP7.2□□□□□ -1.26
LINC00560-201ENST00000564593 LRP8Q14114 963 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 GRIK4Q16099 956 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 CYFIP1Q7L576 1253 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 PMFBP1Q8TBY8 1022 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 EHMT1Q9H9B1 1298 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 CYP4F12Q9HCS2 524 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 PICK1Q9NRD5 415 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 PPP1R9AQ9ULJ8 1098 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 PCDHGC5Q9Y5F6 944 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 ATE1O95260 518 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 IMPDH2P12268 514 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 SOGA3Q5TF21 947 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 SHISA2Q6UWI4 295 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 SHDQ96IW2 340 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 ZNRF3Q9ULT6 936 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 CORINQ9Y5Q5 1042 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 TACC3Q9Y6A5 838 aa7.2□□□□□ -1.26
LINC00560-201ENST00000564593 PRR36Q9H6K5 1346 aa7.19□□□□□ -1.26
LINC00560-201ENST00000564593 HTR3BO95264 441 aa7.19□□□□□ -1.26
LINC00560-201ENST00000564593 ERVK-24P63145 666 aa7.19□□□□□ -1.26
LINC00560-201ENST00000564593 PDE4BQ07343 736 aa7.19□□□□□ -1.26
LINC00560-201ENST00000564593 PPM1JQ5JR12 505 aa7.19□□□□□ -1.26
LINC00560-201ENST00000564593 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.19□□□□□ -1.26
LINC00560-201ENST00000564593 CKAP2LQ8IYA6 745 aa7.19□□□□□ -1.26
LINC00560-201ENST00000564593 C12orf50Q8NA57 414 aaPredicted RBP7.19□□□□□ -1.26
LINC00560-201ENST00000564593 SMG8Q8ND04 991 aaKnown RBP7.19□□□□□ -1.26
LINC00560-201ENST00000564593 NACC1Q96RE7 527 aa7.19□□□□□ -1.26
LINC00560-201ENST00000564593 AP4E1Q9UPM8 1137 aa7.19□□□□□ -1.26
LINC00560-201ENST00000564593 HIF3AQ9Y2N7 669 aa7.19□□□□□ -1.26
LINC00560-201ENST00000564593 LOC105371045A0A1W2PR82 267 aa7.18□□□□□ -1.26
LINC00560-201ENST00000564593 TMPRSS2O15393 492 aa7.18□□□□□ -1.26
LINC00560-201ENST00000564593 PLCG1P19174 1290 aa7.18□□□□□ -1.26
LINC00560-201ENST00000564593 GIPRP48546 466 aa7.18□□□□□ -1.26
LINC00560-201ENST00000564593 RING1Q06587 406 aa7.18□□□□□ -1.26
LINC00560-201ENST00000564593 FDX2Q6P4F2 183 aa7.18□□□□□ -1.26
LINC00560-201ENST00000564593 DPH6Q7L8W6 267 aa7.18□□□□□ -1.26
LINC00560-201ENST00000564593 AGGF1Q8N302 714 aaeCLIP7.18□□□□□ -1.26
LINC00560-201ENST00000564593 TMEM130Q8N3G9 435 aa7.18□□□□□ -1.26
LINC00560-201ENST00000564593 SUGCTQ9HAC7 445 aa7.18□□□□□ -1.26
LINC00560-201ENST00000564593 CRIM1Q9NZV1 1036 aa7.18□□□□□ -1.26
LINC00560-201ENST00000564593 ADH5P11766 374 aa7.17□□□□□ -1.26
LINC00560-201ENST00000564593 DRD2P14416 443 aa7.17□□□□□ -1.26
LINC00560-201ENST00000564593 GRK4P32298 578 aa7.17□□□□□ -1.26
LINC00560-201ENST00000564593 ETF1P62495 437 aaKnown RBP7.17□□□□□ -1.26
LINC00560-201ENST00000564593 SOX4Q06945 474 aaPredicted RBP7.17□□□□□ -1.26
LINC00560-201ENST00000564593 MLECQ14165 292 aa7.17□□□□□ -1.26
LINC00560-201ENST00000564593 ANKS3Q6ZW76 656 aa7.17□□□□□ -1.26
LINC00560-201ENST00000564593 FANCD2OSQ96PS1 177 aa7.17□□□□□ -1.26
LINC00560-201ENST00000564593 LNPKQ9C0E8 428 aa7.17□□□□□ -1.26
LINC00560-201ENST00000564593 REV1Q9UBZ9 1251 aa7.17□□□□□ -1.26
LINC00560-201ENST00000564593 USP21Q9UK80 565 aa7.17□□□□□ -1.26
LINC00560-201ENST00000564593 R3HCC1Q9Y3T6 440 aaKnown RBP7.17□□□□□ -1.26
LINC00560-201ENST00000564593 SHROOM4Q9ULL8 1493 aa7.17□□□□□ -1.26
LINC00560-201ENST00000564593 F8W735 103 aaPredicted RBP7.16□□□□□ -1.26
LINC00560-201ENST00000564593 FANCGO15287 622 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 ALX3O95076 343 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 PGRP06401 933 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 H2AFB1P0C5Y9 115 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 H2AFB2P0C5Z0 115 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 LRRFIP1Q32MZ4 808 aaKnown RBP7.16□□□□□ -1.26
LINC00560-201ENST00000564593 DYMQ7RTS9 669 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 RBBP8NLQ8NC74 664 aaPredicted RBP7.16□□□□□ -1.26
LINC00560-201ENST00000564593 OR6P1Q8NGX9 317 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 LENG1Q96BZ8 264 aaPredicted RBP7.16□□□□□ -1.26
LINC00560-201ENST00000564593 WNT10AQ9GZT5 417 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 ATXN3LQ9H3M9 355 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 DISC1Q9NRI5 854 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 PRKAG3Q9UGI9 489 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 SMAD7O15105 426 aaKnown RBP7.16□□□□□ -1.26
LINC00560-201ENST00000564593 ZBTB37Q5TC79 503 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 ANKRD34AQ69YU3 496 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 LSRQ86X29 649 aaPredicted RBP7.16□□□□□ -1.26
LINC00560-201ENST00000564593 RNF214Q8ND24 703 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 ANTXR1Q9H6X2 564 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 AKTIPQ9H8T0 292 aa7.16□□□□□ -1.26
LINC00560-201ENST00000564593 C9orf172C9J069 976 aa7.15□□□□□ -1.27
LINC00560-201ENST00000564593 TIAF1O95411 115 aa7.15□□□□□ -1.27
LINC00560-201ENST00000564593 TNNI3KQ59H18 835 aa7.15□□□□□ -1.27
LINC00560-201ENST00000564593 FAM169BQ8N8A8 192 aa7.15□□□□□ -1.27
LINC00560-201ENST00000564593 ZNF507Q8TCN5 953 aa7.15□□□□□ -1.27
LINC00560-201ENST00000564593 ADAM30Q9UKF2 790 aa7.15□□□□□ -1.27
LINC00560-201ENST00000564593 HYAL3O43820 417 aaPredicted RBP7.14□□□□□ -1.27
LINC00560-201ENST00000564593 RNGTTO60942 597 aaKnown RBP7.14□□□□□ -1.27
LINC00560-201ENST00000564593 HCLS1P14317 486 aaPredicted RBP7.14□□□□□ -1.27
LINC00560-201ENST00000564593 GLB1P16278 677 aa7.14□□□□□ -1.27
LINC00560-201ENST00000564593 ASPAP45381 313 aa7.14□□□□□ -1.27
LINC00560-201ENST00000564593 NRG1Q02297 640 aaPredicted RBP7.14□□□□□ -1.27
LINC00560-201ENST00000564593 TTLL4Q14679 1199 aa7.14□□□□□ -1.27
LINC00560-201ENST00000564593 CCDC144BQ3MJ40 725 aa7.14□□□□□ -1.27
LINC00560-201ENST00000564593 TMEM201Q5SNT2 666 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms