RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 DACT2Q5SW24 774 aa18.2■□□□□ 0.5
COMMD4-210ENST00000564587 MCTP1Q6DN14 999 aa18.2■□□□□ 0.5
COMMD4-210ENST00000564587 CERS5Q8N5B7 392 aa18.2■□□□□ 0.5
COMMD4-210ENST00000564587 ZSCAN10Q96SZ4 725 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-210ENST00000564587 GPHNQ9NQX3 736 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-210ENST00000564587 TAOK2Q9UL54 1235 aa18.2■□□□□ 0.5
COMMD4-210ENST00000564587 HPS5Q9UPZ3 1129 aa18.2■□□□□ 0.5
COMMD4-210ENST00000564587 CD2APQ9Y5K6 639 aa18.2■□□□□ 0.5
COMMD4-210ENST00000564587 TACC3Q9Y6A5 838 aa18.2■□□□□ 0.5
COMMD4-210ENST00000564587 VPS37CA5D8V6 355 aaPredicted RBP18.19■□□□□ 0.5
COMMD4-210ENST00000564587 H3BQV1 296 aa18.19■□□□□ 0.5
COMMD4-210ENST00000564587 TRAK2O60296 914 aa18.19■□□□□ 0.5
COMMD4-210ENST00000564587 RANBP6O60518 1105 aaKnown RBP18.19■□□□□ 0.5
COMMD4-210ENST00000564587 JAK2O60674 1132 aa18.19■□□□□ 0.5
COMMD4-210ENST00000564587 CALM1P0DP23 149 aa18.19■□□□□ 0.5
COMMD4-210ENST00000564587 CALM2P0DP24 149 aa18.19■□□□□ 0.5
COMMD4-210ENST00000564587 CALM3P0DP25 149 aa18.19■□□□□ 0.5
COMMD4-210ENST00000564587 AOC3Q16853 763 aa18.19■□□□□ 0.5
COMMD4-210ENST00000564587 ZSCAN16Q9H4T2 348 aaPredicted RBP18.19■□□□□ 0.5
COMMD4-210ENST00000564587 INCENPQ9NQS7 918 aa18.19■□□□□ 0.5
COMMD4-210ENST00000564587 CYP2D7A0A087X1C5 515 aa18.18■□□□□ 0.5
COMMD4-210ENST00000564587 GOLGA8AA7E2F4 631 aa18.18■□□□□ 0.5
COMMD4-210ENST00000564587 CTDNEP1O95476 244 aa18.18■□□□□ 0.5
COMMD4-210ENST00000564587 USP17L8P0C7I0 530 aa18.18■□□□□ 0.5
COMMD4-210ENST00000564587 SEC23AQ15436 765 aa18.18■□□□□ 0.5
COMMD4-210ENST00000564587 DALRD3Q5D0E6 543 aaKnown RBP18.18■□□□□ 0.5
COMMD4-210ENST00000564587 TTC6Q86TZ1 520 aa18.18■□□□□ 0.5
COMMD4-210ENST00000564587 ZDHHC15Q96MV8 337 aa18.18■□□□□ 0.5
COMMD4-210ENST00000564587 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-210ENST00000564587 CDK5RAP2Q96SN8 1893 aa18.18■□□□□ 0.5
COMMD4-210ENST00000564587 FOCADQ5VW36 1801 aa18.17■□□□□ 0.5
COMMD4-210ENST00000564587 FOXD4L5Q5VV16 416 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-210ENST00000564587 MAPKAPK5Q8IW41 473 aa18.17■□□□□ 0.5
COMMD4-210ENST00000564587 FOXD4L4Q8WXT5 416 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-210ENST00000564587 DDX11Q96FC9 970 aa18.17■□□□□ 0.5
COMMD4-210ENST00000564587 MKNK2Q9HBH9 465 aa18.17■□□□□ 0.5
COMMD4-210ENST00000564587 NCOA5Q9HCD5 579 aaKnown RBP18.17■□□□□ 0.5
COMMD4-210ENST00000564587 SERPINA10Q9UK55 444 aa18.17■□□□□ 0.5
COMMD4-210ENST00000564587 TNKSO95271 1327 aa18.17■□□□□ 0.5
COMMD4-210ENST00000564587 FLT1P17948 1338 aa18.17■□□□□ 0.5
COMMD4-210ENST00000564587 F8W031 263 aaPredicted RBP18.16■□□□□ 0.5
COMMD4-210ENST00000564587 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
COMMD4-210ENST00000564587 CRKP46108 304 aa18.16■□□□□ 0.5
COMMD4-210ENST00000564587 IFIT1BQ5T764 474 aaKnown RBP18.16■□□□□ 0.5
COMMD4-210ENST00000564587 CATIPQ7Z7H3 387 aa18.16■□□□□ 0.5
COMMD4-210ENST00000564587 ZNF444Q8N0Y2 327 aaPredicted RBP18.16■□□□□ 0.5
COMMD4-210ENST00000564587 WASF1Q92558 559 aa18.16■□□□□ 0.5
COMMD4-210ENST00000564587 TCP11L1Q9NUJ3 509 aa18.16■□□□□ 0.5
COMMD4-210ENST00000564587 USP40Q9NVE5 1235 aa18.16■□□□□ 0.5
COMMD4-210ENST00000564587 STK36Q9NRP7 1315 aa18.16■□□□□ 0.5
COMMD4-210ENST00000564587 PSME4Q14997 1843 aa18.16■□□□□ 0.5
COMMD4-210ENST00000564587 MYH1P12882 1939 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 TSPY2A6NKD2 308 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 DDAH1O94760 285 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 CYP2D6P10635 497 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 NCLP19338 710 aaKnown RBP18.15■□□□□ 0.5
COMMD4-210ENST00000564587 RTN1Q16799 776 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 C16orf86Q6ZW13 317 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 MICU3Q86XE3 530 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 DGKHQ86XP1 1220 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 ZNF654Q8IZM8 581 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 STK11IPQ8N1F8 1099 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 LARGE2Q8N3Y3 721 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 NKX2-3Q8TAU0 364 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 ANKS1AQ92625 1134 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 LMBRD1Q9NUN5 540 aa18.15■□□□□ 0.5
COMMD4-210ENST00000564587 RBM28Q9NW13 759 aaKnown RBP18.15■□□□□ 0.5
COMMD4-210ENST00000564587 ORC3Q9UBD5 711 aaPredicted RBP18.15■□□□□ 0.5
COMMD4-210ENST00000564587 DDX60LQ5H9U9 1706 aaKnown RBP18.15■□□□□ 0.5
COMMD4-210ENST00000564587 MBD3O95983 291 aa18.14■□□□□ 0.49
COMMD4-210ENST00000564587 MMP14P50281 582 aa18.14■□□□□ 0.49
COMMD4-210ENST00000564587 KLHL40Q2TBA0 621 aa18.14■□□□□ 0.49
COMMD4-210ENST00000564587 ENAHQ8N8S7 591 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-210ENST00000564587 ZKSCAN3Q9BRR0 538 aa18.14■□□□□ 0.49
COMMD4-210ENST00000564587 SCN9AQ15858 1988 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 PRDM1O75626 825 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 IFNAR1P17181 557 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 IARSP41252 1262 aaKnown RBP18.13■□□□□ 0.49
COMMD4-210ENST00000564587 SCNN1DP51172 638 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 KRT85P78386 507 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 ATL3Q6DD88 541 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 APOBEC3HQ6NTF7 200 aaKnown RBP18.13■□□□□ 0.49
COMMD4-210ENST00000564587 CDC37L1Q7L3B6 337 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 NIM1KQ8IY84 436 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 TRIM22Q8IYM9 498 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 FANCBQ8NB91 859 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 SGIP1Q9BQI5 828 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 SWAP70Q9UH65 585 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 HDAC9Q9UKV0 1011 aa18.13■□□□□ 0.49
COMMD4-210ENST00000564587 ZNF646O15015 1829 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-210ENST00000564587 PRPF40AO75400 957 aaKnown RBP18.12■□□□□ 0.49
COMMD4-210ENST00000564587 WDHD1O75717 1129 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-210ENST00000564587 HLA-DOAP06340 250 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 TSPY3P0CV98 308 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 TSPY8P0CW00 308 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 FDPSP14324 419 aaKnown RBP18.12■□□□□ 0.49
COMMD4-210ENST00000564587 ADD1P35611 737 aaKnown RBP18.12■□□□□ 0.49
COMMD4-210ENST00000564587 TFAP4Q01664 338 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 SSRP1Q08945 709 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms