RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 RBM5P52756 815 aaKnown RBP eCLIP14.17□□□□□ -0.14
HDGFL3-204ENST00000563790 TLE2Q04725 743 aa14.17□□□□□ -0.14
HDGFL3-204ENST00000563790 HOOK2Q96ED9 719 aa14.17□□□□□ -0.14
HDGFL3-204ENST00000563790 TDRD3Q9H7E2 651 aaKnown RBP14.17□□□□□ -0.14
HDGFL3-204ENST00000563790 CEP295Q9C0D2 2601 aa14.17□□□□□ -0.14
HDGFL3-204ENST00000563790 A0A0G2JLL6 359 aaPredicted RBP14.16□□□□□ -0.14
HDGFL3-204ENST00000563790 MSCO60682 206 aa14.16□□□□□ -0.14
HDGFL3-204ENST00000563790 PRRT2Q7Z6L0 340 aaPredicted RBP14.16□□□□□ -0.14
HDGFL3-204ENST00000563790 ZNF428Q96B54 188 aa14.16□□□□□ -0.14
HDGFL3-204ENST00000563790 THUMPD2Q9BTF0 503 aaKnown RBP14.16□□□□□ -0.14
HDGFL3-204ENST00000563790 LOC285556D6RIA3 1793 aa14.16□□□□□ -0.14
HDGFL3-204ENST00000563790 CCT4P50991 539 aaKnown RBP14.15□□□□□ -0.14
HDGFL3-204ENST00000563790 TMEM240Q5SV17 173 aa14.15□□□□□ -0.14
HDGFL3-204ENST00000563790 MORC1Q86VD1 984 aa14.15□□□□□ -0.14
HDGFL3-204ENST00000563790 RMDN1Q96DB5 314 aa14.15□□□□□ -0.14
HDGFL3-204ENST00000563790 DDX20Q9UHI6 824 aaKnown RBP14.15□□□□□ -0.14
HDGFL3-204ENST00000563790 DLG5Q8TDM6 1919 aa14.14□□□□□ -0.15
HDGFL3-204ENST00000563790 IRS4O14654 1257 aaPredicted RBP14.14□□□□□ -0.15
HDGFL3-204ENST00000563790 FKBP1AP62942 108 aaKnown RBP14.14□□□□□ -0.15
HDGFL3-204ENST00000563790 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
HDGFL3-204ENST00000563790 DCAF15Q66K64 600 aa14.14□□□□□ -0.15
HDGFL3-204ENST00000563790 PPP2R2DQ66LE6 453 aa14.14□□□□□ -0.15
HDGFL3-204ENST00000563790 COPS6Q7L5N1 327 aa14.14□□□□□ -0.15
HDGFL3-204ENST00000563790 ZNF341Q9BYN7 854 aa14.14□□□□□ -0.15
HDGFL3-204ENST00000563790 OTOGLQ3ZCN5 2332 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 PDIA6Q15084 440 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 LEXMQ3ZCV2 418 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 KRT40Q6A162 431 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 CCDC174Q6PII3 467 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 C16orf59Q7L2K0 433 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 MCM10Q7L590 875 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 ANKRD18AQ8IVF6 992 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 SOCS4Q8WXH5 440 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 NUDT12Q9BQG2 462 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 ZNF521Q96K83 1311 aa14.13□□□□□ -0.15
HDGFL3-204ENST00000563790 DOCK1Q14185 1865 aa14.12□□□□□ -0.15
HDGFL3-204ENST00000563790 A0A1B0GUL6 1792 aa14.12□□□□□ -0.15
HDGFL3-204ENST00000563790 IL9P15248 144 aa14.12□□□□□ -0.15
HDGFL3-204ENST00000563790 TAF7Q15545 349 aaPredicted RBP14.12□□□□□ -0.15
HDGFL3-204ENST00000563790 PROSER3Q2NL68 480 aa14.12□□□□□ -0.15
HDGFL3-204ENST00000563790 NOL9Q5SY16 702 aaKnown RBP14.12□□□□□ -0.15
HDGFL3-204ENST00000563790 GJC2Q5T442 439 aaPredicted RBP14.12□□□□□ -0.15
HDGFL3-204ENST00000563790 ZNF112Q9UJU3 913 aa14.12□□□□□ -0.15
HDGFL3-204ENST00000563790 DIAPH1O60610 1272 aaKnown RBP14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 SLC5A1P13866 664 aa14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 GCLCP48506 637 aaPredicted RBP14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 CCL14Q16627 93 aa14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 AMER1Q5JTC6 1135 aaPredicted RBP14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 GADL1Q6ZQY3 521 aa14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 ARRDC4Q8NCT1 418 aa14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 FSD1Q9BTV5 496 aa14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 CD209Q9NNX6 404 aa14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 SERPINA10Q9UK55 444 aa14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 MINPP1Q9UNW1 487 aa14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 DSPP15924 2871 aaKnown RBP14.11□□□□□ -0.15
HDGFL3-204ENST00000563790 KBTBD13C9JR72 458 aa14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 RFXAPO00287 272 aa14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 KLRK1P26718 216 aa14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 CCDC152Q4G0S7 254 aa14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 RTL5Q5HYW3 569 aaPredicted RBP14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 SUGP1Q8IWZ8 645 aaKnown RBP14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 DZIP1LQ8IYY4 767 aaKnown RBP14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 USP6NLQ92738 828 aa14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 MIS18AQ9NYP9 233 aa14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 LEMD3Q9Y2U8 911 aa14.1□□□□□ -0.15
HDGFL3-204ENST00000563790 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 NBL1P41271 181 aa14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 EIF4A1P60842 406 aaKnown RBP14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 PPIGQ13427 754 aaKnown RBP eCLIP14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 PUM1Q14671 1186 aaKnown RBP eCLIP14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 EPHA10Q5JZY3 1008 aa14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 ADSSL1Q8N142 457 aa14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 RTF1Q92541 710 aaKnown RBP14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 ISCA1Q9BUE6 129 aa14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 UBE2ZQ9H832 354 aaPredicted RBP14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 TMEM39AQ9NV64 488 aa14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 PNMA3Q9UL41 463 aa14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 UTYO14607 1347 aa14.09□□□□□ -0.15
HDGFL3-204ENST00000563790 DOCK2Q92608 1830 aa14.08□□□□□ -0.15
HDGFL3-204ENST00000563790 GRXCR2A6NFK2 248 aa14.08□□□□□ -0.16
HDGFL3-204ENST00000563790 PTCRAQ6ISU1 281 aaPredicted RBP14.08□□□□□ -0.16
HDGFL3-204ENST00000563790 PSRC1Q6PGN9 363 aaPredicted RBP14.08□□□□□ -0.16
HDGFL3-204ENST00000563790 FAM83AQ86UY5 434 aa14.08□□□□□ -0.16
HDGFL3-204ENST00000563790 SLC44A5Q8NCS7 719 aa14.08□□□□□ -0.16
HDGFL3-204ENST00000563790 PBXIP1Q96AQ6 731 aa14.08□□□□□ -0.16
HDGFL3-204ENST00000563790 PHACTR3Q96KR7 559 aa14.08□□□□□ -0.16
HDGFL3-204ENST00000563790 UPF3BQ9BZI7 483 aaKnown RBP14.08□□□□□ -0.16
HDGFL3-204ENST00000563790 AGTPBP1Q9UPW5 1226 aa14.08□□□□□ -0.16
HDGFL3-204ENST00000563790 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
HDGFL3-204ENST00000563790 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
HDGFL3-204ENST00000563790 TIMP1P01033 207 aa14.07□□□□□ -0.16
HDGFL3-204ENST00000563790 ADCYAP1R1P41586 468 aa14.07□□□□□ -0.16
HDGFL3-204ENST00000563790 HERC4Q5GLZ8 1057 aaPredicted RBP14.07□□□□□ -0.16
HDGFL3-204ENST00000563790 MFSD5Q6N075 450 aa14.07□□□□□ -0.16
HDGFL3-204ENST00000563790 MIGA2Q7L4E1 593 aa14.07□□□□□ -0.16
HDGFL3-204ENST00000563790 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
HDGFL3-204ENST00000563790 SH2B1Q9NRF2 756 aaPredicted RBP14.07□□□□□ -0.16
HDGFL3-204ENST00000563790 MYO18BQ8IUG5 2567 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms