RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 MAP3K10Q02779 954 aa19.24■□□□□ 0.67
SF3B3-203ENST00000562874 ERC1Q8IUD2 1116 aa19.24■□□□□ 0.67
SF3B3-203ENST00000562874 TGFBRAP1Q8WUH2 860 aa19.24■□□□□ 0.67
SF3B3-203ENST00000562874 ZNF512BQ96KM6 892 aaPredicted RBP19.24■□□□□ 0.67
SF3B3-203ENST00000562874 ANTXR1Q9H6X2 564 aa19.24■□□□□ 0.67
SF3B3-203ENST00000562874 DDX19BQ9UMR2 479 aa19.24■□□□□ 0.67
SF3B3-203ENST00000562874 A0A0G2JLL6 359 aaPredicted RBP19.23■□□□□ 0.67
SF3B3-203ENST00000562874 POTEFA5A3E0 1075 aa19.23■□□□□ 0.67
SF3B3-203ENST00000562874 NPM3O75607 178 aaKnown RBP19.23■□□□□ 0.67
SF3B3-203ENST00000562874 CYP2C8P10632 490 aa19.23■□□□□ 0.67
SF3B3-203ENST00000562874 CTGFP29279 349 aa19.23■□□□□ 0.67
SF3B3-203ENST00000562874 RRP1BQ14684 758 aaKnown RBP19.23■□□□□ 0.67
SF3B3-203ENST00000562874 C20orf194Q5TEA3 1177 aa19.23■□□□□ 0.67
SF3B3-203ENST00000562874 GPAT2Q6NUI2 795 aa19.23■□□□□ 0.67
SF3B3-203ENST00000562874 PRRT2Q7Z6L0 340 aaPredicted RBP19.23■□□□□ 0.67
SF3B3-203ENST00000562874 RHPN1Q8TCX5 695 aa19.23■□□□□ 0.67
SF3B3-203ENST00000562874 AFG3L2Q9Y4W6 797 aa19.23■□□□□ 0.67
SF3B3-203ENST00000562874 CTNND1O60716 968 aaKnown RBP19.22■□□□□ 0.67
SF3B3-203ENST00000562874 BAG3O95817 575 aa19.22■□□□□ 0.67
SF3B3-203ENST00000562874 CYP7A1P22680 504 aa19.22■□□□□ 0.67
SF3B3-203ENST00000562874 C17orf99Q6UX52 265 aa19.22■□□□□ 0.67
SF3B3-203ENST00000562874 SIRT2Q8IXJ6 389 aa19.22■□□□□ 0.67
SF3B3-203ENST00000562874 MIGA1Q8NAN2 632 aa19.22■□□□□ 0.67
SF3B3-203ENST00000562874 PARK7Q99497 189 aaKnown RBP19.22■□□□□ 0.67
SF3B3-203ENST00000562874 ZBTB40Q9NUA8 1239 aa19.22■□□□□ 0.67
SF3B3-203ENST00000562874 SAP30BPQ9UHR5 308 aaKnown RBP19.22■□□□□ 0.67
SF3B3-203ENST00000562874 PLXNB2O15031 1838 aa19.22■□□□□ 0.67
SF3B3-203ENST00000562874 CXCL11O14625 94 aa19.21■□□□□ 0.67
SF3B3-203ENST00000562874 TBC1D12O60347 775 aa19.21■□□□□ 0.67
SF3B3-203ENST00000562874 MAP4K4O95819 1239 aaPredicted RBP19.21■□□□□ 0.67
SF3B3-203ENST00000562874 MYCP01106 439 aaPredicted RBP19.21■□□□□ 0.67
SF3B3-203ENST00000562874 KIF22Q14807 665 aa19.21■□□□□ 0.67
SF3B3-203ENST00000562874 MAGEB6Q8N7X4 407 aa19.21■□□□□ 0.67
SF3B3-203ENST00000562874 PLCG2P16885 1265 aa19.2■□□□□ 0.66
SF3B3-203ENST00000562874 SHROOM1Q2M3G4 852 aaPredicted RBP19.2■□□□□ 0.66
SF3B3-203ENST00000562874 SLC9C1Q4G0N8 1177 aa19.2■□□□□ 0.66
SF3B3-203ENST00000562874 ARMC5Q96C12 935 aa19.2■□□□□ 0.66
SF3B3-203ENST00000562874 DNAJC18Q9H819 358 aa19.2■□□□□ 0.66
SF3B3-203ENST00000562874 PPP4CP60510 307 aa19.19■□□□□ 0.66
SF3B3-203ENST00000562874 SH3TC2Q8TF17 1288 aa19.19■□□□□ 0.66
SF3B3-203ENST00000562874 TRIM47Q96LD4 638 aa19.19■□□□□ 0.66
SF3B3-203ENST00000562874 PALD1Q9ULE6 856 aa19.19■□□□□ 0.66
SF3B3-203ENST00000562874 HMMRO75330 724 aa19.18■□□□□ 0.66
SF3B3-203ENST00000562874 CAP2P40123 477 aa19.18■□□□□ 0.66
SF3B3-203ENST00000562874 PSMC4P43686 418 aa19.18■□□□□ 0.66
SF3B3-203ENST00000562874 ARHGEF6Q15052 776 aa19.18■□□□□ 0.66
SF3B3-203ENST00000562874 HSP90AB4PQ58FF6 505 aa19.18■□□□□ 0.66
SF3B3-203ENST00000562874 TREML2Q5T2D2 321 aa19.18■□□□□ 0.66
SF3B3-203ENST00000562874 FASTKD5Q7L8L6 764 aaKnown RBP19.18■□□□□ 0.66
SF3B3-203ENST00000562874 RPAP2Q8IXW5 612 aaPredicted RBP19.18■□□□□ 0.66
SF3B3-203ENST00000562874 KIF1BPQ96EK5 621 aa19.18■□□□□ 0.66
SF3B3-203ENST00000562874 GDF11O95390 407 aa19.17■□□□□ 0.66
SF3B3-203ENST00000562874 BCRP11274 1271 aa19.17■□□□□ 0.66
SF3B3-203ENST00000562874 SPP2Q13103 211 aa19.17■□□□□ 0.66
SF3B3-203ENST00000562874 CLASRPQ8N2M8 674 aaKnown RBP19.17■□□□□ 0.66
SF3B3-203ENST00000562874 CRACR2BQ8N4Y2 399 aaPredicted RBP19.17■□□□□ 0.66
SF3B3-203ENST00000562874 ZNF333Q96JL9 665 aa19.17■□□□□ 0.66
SF3B3-203ENST00000562874 DNAJC2Q99543 621 aaKnown RBP19.17■□□□□ 0.66
SF3B3-203ENST00000562874 PI4KBQ9UBF8 816 aa19.17■□□□□ 0.66
SF3B3-203ENST00000562874 HERC5Q9UII4 1024 aaKnown RBP19.17■□□□□ 0.66
SF3B3-203ENST00000562874 PARP14Q460N5 1801 aa19.16■□□□□ 0.66
SF3B3-203ENST00000562874 FMNL1O95466 1100 aaPredicted RBP19.16■□□□□ 0.66
SF3B3-203ENST00000562874 OSBPP22059 807 aa19.16■□□□□ 0.66
SF3B3-203ENST00000562874 HMGCS2P54868 508 aa19.16■□□□□ 0.66
SF3B3-203ENST00000562874 JAG1P78504 1218 aa19.16■□□□□ 0.66
SF3B3-203ENST00000562874 EDC3Q96F86 508 aaKnown RBP19.16■□□□□ 0.66
SF3B3-203ENST00000562874 TRIM34Q9BYJ4 488 aa19.16■□□□□ 0.66
SF3B3-203ENST00000562874 DHX36Q9H2U1 1008 aaKnown RBP19.16■□□□□ 0.66
SF3B3-203ENST00000562874 AGTPBP1Q9UPW5 1226 aa19.16■□□□□ 0.66
SF3B3-203ENST00000562874 MYPNQ86TC9 1320 aa19.16■□□□□ 0.66
SF3B3-203ENST00000562874 MKI67P46013 3256 aaKnown RBP19.15■□□□□ 0.66
SF3B3-203ENST00000562874 IFIT2P09913 472 aaKnown RBP19.15■□□□□ 0.66
SF3B3-203ENST00000562874 USP5P45974 858 aa19.15■□□□□ 0.66
SF3B3-203ENST00000562874 MAP3K12Q12852 859 aa19.15■□□□□ 0.66
SF3B3-203ENST00000562874 ZNF280CQ8ND82 737 aa19.15■□□□□ 0.66
SF3B3-203ENST00000562874 SMCR8Q8TEV9 937 aaPredicted RBP19.15■□□□□ 0.66
SF3B3-203ENST00000562874 GOLIM4O00461 696 aa19.14■□□□□ 0.65
SF3B3-203ENST00000562874 EN2P19622 333 aaPredicted RBP19.14■□□□□ 0.65
SF3B3-203ENST00000562874 SRRDQ9UH36 339 aa19.14■□□□□ 0.65
SF3B3-203ENST00000562874 FRMPD3Q5JV73 1810 aa19.14■□□□□ 0.65
SF3B3-203ENST00000562874 USP17L5A8MUK1 530 aa19.13■□□□□ 0.65
SF3B3-203ENST00000562874 HLA-DOAP06340 250 aa19.13■□□□□ 0.65
SF3B3-203ENST00000562874 PRKCZQ05513 592 aa19.13■□□□□ 0.65
SF3B3-203ENST00000562874 MTMR2Q13614 643 aa19.13■□□□□ 0.65
SF3B3-203ENST00000562874 ZBTB21Q9ULJ3 1066 aa19.13■□□□□ 0.65
SF3B3-203ENST00000562874 SLC45A1Q9Y2W3 748 aa19.13■□□□□ 0.65
SF3B3-203ENST00000562874 COL11A1P12107 1806 aaPredicted RBP19.13■□□□□ 0.65
SF3B3-203ENST00000562874 ALPK3Q96L96 1907 aa19.12■□□□□ 0.65
SF3B3-203ENST00000562874 SMARCA5O60264 1052 aaPredicted RBP19.12■□□□□ 0.65
SF3B3-203ENST00000562874 GNRH1P01148 92 aa19.12■□□□□ 0.65
SF3B3-203ENST00000562874 PDE6AP16499 860 aa19.12■□□□□ 0.65
SF3B3-203ENST00000562874 FCGRTP55899 365 aa19.12■□□□□ 0.65
SF3B3-203ENST00000562874 SLFNL1Q499Z3 407 aa19.12■□□□□ 0.65
SF3B3-203ENST00000562874 NBPF11Q86T75 865 aa19.12■□□□□ 0.65
SF3B3-203ENST00000562874 ANKRD13CQ8N6S4 541 aa19.12■□□□□ 0.65
SF3B3-203ENST00000562874 PROCA1Q8NCQ7 364 aaPredicted RBP19.12■□□□□ 0.65
SF3B3-203ENST00000562874 RAET1EQ8TD07 263 aa19.12■□□□□ 0.65
SF3B3-203ENST00000562874 RIOK1Q9BRS2 568 aaKnown RBP19.12■□□□□ 0.65
SF3B3-203ENST00000562874 TMEM106CQ9BVX2 250 aa19.12■□□□□ 0.65
SF3B3-203ENST00000562874 AS3MTQ9HBK9 375 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms