RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 DCAF15Q66K64 600 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 NBPF11Q86T75 865 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 GPATCH3Q96I76 525 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 DNAJC2Q99543 621 aaKnown RBP20.11■□□□□ 0.81
CDT1-202ENST00000562747 HAUS7Q99871 368 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 ZNF341Q9BYN7 854 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 BOLA2Q9H3K6 86 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 ECHDC1Q9NTX5 307 aa20.11■□□□□ 0.81
CDT1-202ENST00000562747 AK9Q5TCS8 1911 aa20.1■□□□□ 0.81
CDT1-202ENST00000562747 PPATQ06203 517 aa20.1■□□□□ 0.81
CDT1-202ENST00000562747 MOGSQ13724 837 aa20.1■□□□□ 0.81
CDT1-202ENST00000562747 C17orf99Q6UX52 265 aa20.1■□□□□ 0.81
CDT1-202ENST00000562747 CERS3Q8IU89 383 aa20.1■□□□□ 0.81
CDT1-202ENST00000562747 RWDD1Q9H446 243 aaPredicted RBP20.1■□□□□ 0.81
CDT1-202ENST00000562747 CPA4Q9UI42 421 aa20.1■□□□□ 0.81
CDT1-202ENST00000562747 GOLIM4O00461 696 aa20.09■□□□□ 0.81
CDT1-202ENST00000562747 CYP7A1P22680 504 aa20.09■□□□□ 0.81
CDT1-202ENST00000562747 FXR1P51114 621 aaKnown RBP eCLIP20.09■□□□□ 0.81
CDT1-202ENST00000562747 ADGRA1Q86SQ6 560 aa20.09■□□□□ 0.81
CDT1-202ENST00000562747 MAGEB6Q8N7X4 407 aa20.09■□□□□ 0.81
CDT1-202ENST00000562747 SHISA4Q96DD7 197 aa20.09■□□□□ 0.81
CDT1-202ENST00000562747 DDX4Q9NQI0 724 aaKnown RBP20.09■□□□□ 0.81
CDT1-202ENST00000562747 PAG1Q9NWQ8 432 aa20.09■□□□□ 0.81
CDT1-202ENST00000562747 AATFQ9NY61 560 aaKnown RBP eCLIP20.09■□□□□ 0.81
CDT1-202ENST00000562747 ZBTB47Q9UFB7 747 aaPredicted RBP20.09■□□□□ 0.81
CDT1-202ENST00000562747 ZNF112Q9UJU3 913 aa20.09■□□□□ 0.81
CDT1-202ENST00000562747 KIF22Q14807 665 aa20.08■□□□□ 0.81
CDT1-202ENST00000562747 ANKRD23Q86SG2 305 aa20.08■□□□□ 0.81
CDT1-202ENST00000562747 TRIM47Q96LD4 638 aa20.08■□□□□ 0.81
CDT1-202ENST00000562747 KCNH4Q9UQ05 1017 aa20.08■□□□□ 0.81
CDT1-202ENST00000562747 ATRNL1Q5VV63 1379 aa20.08■□□□□ 0.8
CDT1-202ENST00000562747 MGAMO43451 1857 aa20.07■□□□□ 0.8
CDT1-202ENST00000562747 PDHXO00330 501 aa20.07■□□□□ 0.8
CDT1-202ENST00000562747 PICALMQ13492 652 aa20.07■□□□□ 0.8
CDT1-202ENST00000562747 MTFR1Q15390 333 aa20.07■□□□□ 0.8
CDT1-202ENST00000562747 ZFPM1Q8IX07 1006 aa20.07■□□□□ 0.8
CDT1-202ENST00000562747 TEX11Q8IYF3 940 aa20.07■□□□□ 0.8
CDT1-202ENST00000562747 SH3RF3Q8TEJ3 882 aaPredicted RBP20.07■□□□□ 0.8
CDT1-202ENST00000562747 COLQQ9Y215 455 aaPredicted RBP20.07■□□□□ 0.8
CDT1-202ENST00000562747 TTC41PQ6P2S7 1318 aa20.06■□□□□ 0.8
CDT1-202ENST00000562747 COL2A1P02458 1487 aaPredicted RBP20.06■□□□□ 0.8
CDT1-202ENST00000562747 ANKRD45Q5TZF3 282 aa20.06■□□□□ 0.8
CDT1-202ENST00000562747 ZSCAN29Q8IWY8 852 aaPredicted RBP20.06■□□□□ 0.8
CDT1-202ENST00000562747 EDC3Q96F86 508 aaKnown RBP20.06■□□□□ 0.8
CDT1-202ENST00000562747 PTPRFP10586 1907 aa20.06■□□□□ 0.8
CDT1-202ENST00000562747 CEP290O15078 2479 aa20.05■□□□□ 0.8
CDT1-202ENST00000562747 GNRH1P01148 92 aa20.05■□□□□ 0.8
CDT1-202ENST00000562747 PDE6AP16499 860 aa20.05■□□□□ 0.8
CDT1-202ENST00000562747 OSBPP22059 807 aa20.05■□□□□ 0.8
CDT1-202ENST00000562747 NOL9Q5SY16 702 aaKnown RBP20.05■□□□□ 0.8
CDT1-202ENST00000562747 SLC9C2Q5TAH2 1124 aa20.05■□□□□ 0.8
CDT1-202ENST00000562747 SMC5Q8IY18 1101 aa20.05■□□□□ 0.8
CDT1-202ENST00000562747 OSBPL5Q9H0X9 879 aaPredicted RBP20.05■□□□□ 0.8
CDT1-202ENST00000562747 SRRDQ9UH36 339 aa20.05■□□□□ 0.8
CDT1-202ENST00000562747 PHIPQ8WWQ0 1821 aa20.04■□□□□ 0.8
CDT1-202ENST00000562747 DDTLA6NHG4 134 aaPredicted RBP20.04■□□□□ 0.8
CDT1-202ENST00000562747 H0YGN5 161 aa20.04■□□□□ 0.8
CDT1-202ENST00000562747 ERC2O15083 957 aa20.04■□□□□ 0.8
CDT1-202ENST00000562747 PSMC4P43686 418 aa20.04■□□□□ 0.8
CDT1-202ENST00000562747 SH3BP5LQ7L8J4 393 aa20.04■□□□□ 0.8
CDT1-202ENST00000562747 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.04■□□□□ 0.81e-6■■□□□ 11.9
CDT1-202ENST00000562747 DOCK1Q14185 1865 aa20.04■□□□□ 0.8
CDT1-202ENST00000562747 FOCADQ5VW36 1801 aa20.04■□□□□ 0.8
CDT1-202ENST00000562747 IGHDP01880 384 aa20.03■□□□□ 0.8
CDT1-202ENST00000562747 PRMT2P55345 433 aa20.03■□□□□ 0.8
CDT1-202ENST00000562747 DYNLL1P63167 89 aaKnown RBP20.03■□□□□ 0.8
CDT1-202ENST00000562747 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
CDT1-202ENST00000562747 MAP3K10Q02779 954 aa20.03■□□□□ 0.8
CDT1-202ENST00000562747 GPAT2Q6NUI2 795 aa20.03■□□□□ 0.8
CDT1-202ENST00000562747 MIGA1Q8NAN2 632 aa20.03■□□□□ 0.8
CDT1-202ENST00000562747 TGFBRAP1Q8WUH2 860 aa20.03■□□□□ 0.8
CDT1-202ENST00000562747 CDK5RAP2Q96SN8 1893 aa20.03■□□□□ 0.8
CDT1-202ENST00000562747 SALL3Q9BXA9 1300 aa20.02■□□□□ 0.8
CDT1-202ENST00000562747 ZNF532Q9HCE3 1301 aa20.02■□□□□ 0.8
CDT1-202ENST00000562747 TCRBV5S4A2TA0A5A2 114 aa20.02■□□□□ 0.8
CDT1-202ENST00000562747 GLRX3O76003 335 aaKnown RBP20.02■□□□□ 0.8
CDT1-202ENST00000562747 SLURP2P0DP57 97 aa20.02■□□□□ 0.8
CDT1-202ENST00000562747 CYP2C8P10632 490 aa20.02■□□□□ 0.8
CDT1-202ENST00000562747 MX1P20591 662 aa20.02■□□□□ 0.8
CDT1-202ENST00000562747 ADD2P35612 726 aa20.02■□□□□ 0.8
CDT1-202ENST00000562747 TSHZ3Q63HK5 1081 aa20.02■□□□□ 0.8
CDT1-202ENST00000562747 ZSCAN25Q6NSZ9 544 aa20.02■□□□□ 0.8
CDT1-202ENST00000562747 DHX36Q9H2U1 1008 aaKnown RBP20.02■□□□□ 0.8
CDT1-202ENST00000562747 FLT1P17948 1338 aa20.02■□□□□ 0.79
CDT1-202ENST00000562747 MYPNQ86TC9 1320 aa20.02■□□□□ 0.79
CDT1-202ENST00000562747 MAGEB6P1A0A0J9YX57 407 aa20.01■□□□□ 0.79
CDT1-202ENST00000562747 TBC1D12O60347 775 aa20.01■□□□□ 0.79
CDT1-202ENST00000562747 FMNL1O95466 1100 aaPredicted RBP20.01■□□□□ 0.79
CDT1-202ENST00000562747 BCRP11274 1271 aa20.01■□□□□ 0.79
CDT1-202ENST00000562747 PI4K2BQ8TCG2 481 aa20.01■□□□□ 0.79
CDT1-202ENST00000562747 OTUD7AQ8TE49 926 aaPredicted RBP20.01■□□□□ 0.79
CDT1-202ENST00000562747 RIOK1Q9BRS2 568 aaKnown RBP20.01■□□□□ 0.79
CDT1-202ENST00000562747 MYH7P12883 1935 aa20.01■□□□□ 0.79
CDT1-202ENST00000562747 TRIOBPQ9H2D6 2365 aa20■□□□□ 0.79
CDT1-202ENST00000562747 PHF20L1A8MW92 1017 aa20■□□□□ 0.79
CDT1-202ENST00000562747 GRK4P32298 578 aa20■□□□□ 0.79
CDT1-202ENST00000562747 PRKCZQ05513 592 aa20■□□□□ 0.79
CDT1-202ENST00000562747 UBE3CQ15386 1083 aa20■□□□□ 0.79
CDT1-202ENST00000562747 MAPKAPK5Q8IW41 473 aa20■□□□□ 0.79
CDT1-202ENST00000562747 KBTBD3Q8NAB2 608 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms