RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 CIAPIN1Q6FI81 312 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 ZNF804AQ7Z570 1209 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 PODNQ7Z5L7 613 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 VPS37DQ86XT2 251 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 GPC2Q8N158 579 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 PIH1D3Q9NQM4 214 aaKnown RBP13.58□□□□□ -0.24
PCAT1-202ENST00000561978 ZNF532Q9HCE3 1301 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 PCNTO95613 3336 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 PDE6AP16499 860 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 HIBADHP31937 336 aaKnown RBP13.58□□□□□ -0.24
PCAT1-202ENST00000561978 UVSSAQ2YD98 709 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 HS1BP3Q53T59 392 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 C15orf52Q6ZUT6 534 aaKnown RBP13.58□□□□□ -0.24
PCAT1-202ENST00000561978 FERMT3Q86UX7 667 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 AIDAQ96BJ3 306 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 SPATA32Q96LK8 384 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 RRAGCQ9HB90 399 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
PCAT1-202ENST00000561978 PRC1O43663 620 aa13.57□□□□□ -0.24
PCAT1-202ENST00000561978 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
PCAT1-202ENST00000561978 MB21D2Q8IYB1 491 aaPredicted RBP13.57□□□□□ -0.24
PCAT1-202ENST00000561978 DDX11Q96FC9 970 aa13.57□□□□□ -0.24
PCAT1-202ENST00000561978 MXD3Q9BW11 206 aa13.57□□□□□ -0.24
PCAT1-202ENST00000561978 NAP1L2Q9ULW6 460 aaPredicted RBP13.57□□□□□ -0.24
PCAT1-202ENST00000561978 TCRBV5S4A2TA0A5A2 114 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 PTPDC1A2A3K4 754 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 APPP05067 770 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 GNAT2P19087 354 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 HAND2P61296 217 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 GTF2IP78347 998 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 RGS22Q8NE09 1264 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 CEP350Q5VT06 3117 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 POTECB2RU33 542 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 PATL2C9JE40 543 aaKnown RBP13.56□□□□□ -0.24
PCAT1-202ENST00000561978 SCNN1DP51172 638 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 CCT2P78371 535 aaKnown RBP13.56□□□□□ -0.24
PCAT1-202ENST00000561978 RESTQ13127 1097 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 TNIP1Q15025 636 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 FBXO33Q7Z6M2 555 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 TTC6Q86TZ1 520 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 PDLIM2Q96JY6 352 aa13.56□□□□□ -0.24
PCAT1-202ENST00000561978 STRBPQ96SI9 672 aaKnown RBP13.56□□□□□ -0.24
PCAT1-202ENST00000561978 GNL3LQ9NVN8 582 aaKnown RBP13.56□□□□□ -0.24
PCAT1-202ENST00000561978 SHTN1A0MZ66 631 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 USP17L3A6NCW0 530 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 USP17L4A6NCW7 530 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 ESPNB1AK53 854 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 DTNBO60941 627 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 CTDNEP1O95476 244 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 IL1R1P14778 569 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 GMPSP49915 693 aaPredicted RBP13.55□□□□□ -0.24
PCAT1-202ENST00000561978 RASGRF1Q13972 1273 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 CHST3Q7LGC8 479 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 USP17L1Q7RTZ2 530 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 LEO1Q8WVC0 666 aaPredicted RBP13.55□□□□□ -0.24
PCAT1-202ENST00000561978 SALL1Q9NSC2 1324 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 PSME4Q14997 1843 aa13.55□□□□□ -0.24
PCAT1-202ENST00000561978 ZNF396Q96N95 335 aaPredicted RBP13.54□□□□□ -0.24
PCAT1-202ENST00000561978 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
PCAT1-202ENST00000561978 VIL1P09327 827 aaKnown RBP13.54□□□□□ -0.24
PCAT1-202ENST00000561978 CLCN1P35523 988 aa13.54□□□□□ -0.24
PCAT1-202ENST00000561978 EPS15P42566 896 aa13.54□□□□□ -0.24
PCAT1-202ENST00000561978 PLCB2Q00722 1185 aa13.54□□□□□ -0.24
PCAT1-202ENST00000561978 MAGEB6Q8N7X4 407 aa13.54□□□□□ -0.24
PCAT1-202ENST00000561978 TDRD7Q8NHU6 1098 aaKnown RBP13.54□□□□□ -0.24
PCAT1-202ENST00000561978 L3MBTL3Q96JM7 780 aaPredicted RBP13.54□□□□□ -0.24
PCAT1-202ENST00000561978 TMEM87BQ96K49 555 aa13.54□□□□□ -0.24
PCAT1-202ENST00000561978 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
PCAT1-202ENST00000561978 RRAGDQ9NQL2 400 aaPredicted RBP13.54□□□□□ -0.24
PCAT1-202ENST00000561978 TFIP11Q9UBB9 837 aaKnown RBP13.54□□□□□ -0.24
PCAT1-202ENST00000561978 MYH13Q9UKX3 1938 aa13.54□□□□□ -0.24
PCAT1-202ENST00000561978 WDR90Q96KV7 1748 aa13.53□□□□□ -0.24
PCAT1-202ENST00000561978 KLF18A0A0U1RQI7 1052 aa13.53□□□□□ -0.24
PCAT1-202ENST00000561978 CHAF1AQ13111 956 aaPredicted RBP13.53□□□□□ -0.24
PCAT1-202ENST00000561978 DACT2Q5SW24 774 aa13.53□□□□□ -0.24
PCAT1-202ENST00000561978 STRIP1Q5VSL9 837 aa13.53□□□□□ -0.24
PCAT1-202ENST00000561978 CNNM2Q9H8M5 875 aa13.53□□□□□ -0.24
PCAT1-202ENST00000561978 DDX19AQ9NUU7 478 aaKnown RBP13.53□□□□□ -0.24
PCAT1-202ENST00000561978 ZNF646O15015 1829 aaPredicted RBP13.53□□□□□ -0.24
PCAT1-202ENST00000561978 CPLX1O14810 134 aa13.52□□□□□ -0.24
PCAT1-202ENST00000561978 VEGFAP15692 232 aaPredicted RBP13.52□□□□□ -0.24
PCAT1-202ENST00000561978 NUBP1P53384 320 aa13.52□□□□□ -0.24
PCAT1-202ENST00000561978 FAM173BQ6P4H8 233 aa13.52□□□□□ -0.24
PCAT1-202ENST00000561978 RSBN1LQ6PCB5 846 aaPredicted RBP13.52□□□□□ -0.24
PCAT1-202ENST00000561978 IFNL3Q8IZI9 196 aa13.52□□□□□ -0.24
PCAT1-202ENST00000561978 MS4A3Q96HJ5 214 aa13.52□□□□□ -0.24
PCAT1-202ENST00000561978 NAPBQ9H115 298 aa13.52□□□□□ -0.24
PCAT1-202ENST00000561978 NCOA5Q9HCD5 579 aaKnown RBP13.52□□□□□ -0.24
PCAT1-202ENST00000561978 ANGEL1Q9UNK9 670 aaKnown RBP13.52□□□□□ -0.24
PCAT1-202ENST00000561978 SCN4AP35499 1836 aa13.52□□□□□ -0.24
PCAT1-202ENST00000561978 GOLGA8BA8MQT2 603 aa13.52□□□□□ -0.25
PCAT1-202ENST00000561978 CDKL5O76039 1030 aa13.52□□□□□ -0.25
PCAT1-202ENST00000561978 CCDC192P0DO97 292 aa13.52□□□□□ -0.25
PCAT1-202ENST00000561978 ANTXR2P58335 489 aa13.52□□□□□ -0.25
PCAT1-202ENST00000561978 CPLX2Q6PUV4 134 aaKnown RBP13.52□□□□□ -0.25
PCAT1-202ENST00000561978 CERS5Q8N5B7 392 aa13.52□□□□□ -0.25
PCAT1-202ENST00000561978 RNF214Q8ND24 703 aa13.52□□□□□ -0.25
PCAT1-202ENST00000561978 NUP62CLQ9H1M0 184 aa13.52□□□□□ -0.25
PCAT1-202ENST00000561978 GPRC5DQ9NZD1 345 aa13.52□□□□□ -0.25
PCAT1-202ENST00000561978 LRP2BPQ9P2M1 347 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms