RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 PRRT2Q7Z6L0 340 aaPredicted RBP16.5■□□□□ 0.23
USB1-205ENST00000561743 ARHGAP39Q9C0H5 1083 aa16.5■□□□□ 0.23
USB1-205ENST00000561743 DDX60LQ5H9U9 1706 aaKnown RBP16.5■□□□□ 0.23
USB1-205ENST00000561743 FLT1P17948 1338 aa16.49■□□□□ 0.23
USB1-205ENST00000561743 HMMRO75330 724 aa16.49■□□□□ 0.23
USB1-205ENST00000561743 IDH1O75874 414 aaKnown RBP16.49■□□□□ 0.23
USB1-205ENST00000561743 CCDC84Q86UT8 332 aaPredicted RBP16.49■□□□□ 0.23
USB1-205ENST00000561743 TGFBRAP1Q8WUH2 860 aa16.49■□□□□ 0.23
USB1-205ENST00000561743 ANTXR1Q9H6X2 564 aa16.49■□□□□ 0.23
USB1-205ENST00000561743 CPA4Q9UI42 421 aa16.49■□□□□ 0.23
USB1-205ENST00000561743 NAV1Q8NEY1 1877 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 TRIM75PA6NK02 468 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 APBB1O00213 710 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 CYP7A1P22680 504 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 RRP1BQ14684 758 aaKnown RBP16.48■□□□□ 0.23
USB1-205ENST00000561743 ARHGEF6Q15052 776 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 FASTKD5Q7L8L6 764 aaKnown RBP16.48■□□□□ 0.23
USB1-205ENST00000561743 MAPKAPK5Q8IW41 473 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 KIF1BPQ96EK5 621 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 DHX36Q9H2U1 1008 aaKnown RBP16.48■□□□□ 0.23
USB1-205ENST00000561743 PI4KBQ9UBF8 816 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 HERC5Q9UII4 1024 aaKnown RBP16.48■□□□□ 0.23
USB1-205ENST00000561743 PTCH2Q9Y6C5 1203 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 MYH7P12883 1935 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 BRCA2P51587 3418 aa16.48■□□□□ 0.23
USB1-205ENST00000561743 PDE4DIPQ5VU43 2346 aa16.47■□□□□ 0.23
USB1-205ENST00000561743 CYP2C8P10632 490 aa16.47■□□□□ 0.23
USB1-205ENST00000561743 CTGFP29279 349 aa16.47■□□□□ 0.23
USB1-205ENST00000561743 CAP2P40123 477 aa16.47■□□□□ 0.23
USB1-205ENST00000561743 DYNLL1P63167 89 aaKnown RBP16.47■□□□□ 0.23
USB1-205ENST00000561743 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
USB1-205ENST00000561743 KIF22Q14807 665 aa16.47■□□□□ 0.23
USB1-205ENST00000561743 CLASRPQ8N2M8 674 aaKnown RBP16.47■□□□□ 0.23
USB1-205ENST00000561743 MAGEB6Q8N7X4 407 aa16.47■□□□□ 0.23
USB1-205ENST00000561743 ARMC5Q96C12 935 aa16.47■□□□□ 0.23
USB1-205ENST00000561743 PARK7Q99497 189 aaKnown RBP16.47■□□□□ 0.23
USB1-205ENST00000561743 CHMP4BQ9H444 224 aaKnown RBP16.47■□□□□ 0.23
USB1-205ENST00000561743 GADL1Q6ZQY3 521 aa16.46■□□□□ 0.23
USB1-205ENST00000561743 MIGA1Q8NAN2 632 aa16.46■□□□□ 0.23
USB1-205ENST00000561743 DNAJC18Q9H819 358 aa16.46■□□□□ 0.23
USB1-205ENST00000561743 PALD1Q9ULE6 856 aa16.46■□□□□ 0.23
USB1-205ENST00000561743 RAB11FIP3O75154 756 aa16.45■□□□□ 0.22
USB1-205ENST00000561743 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
USB1-205ENST00000561743 GNRH1P01148 92 aa16.45■□□□□ 0.22
USB1-205ENST00000561743 BCRP11274 1271 aa16.45■□□□□ 0.22
USB1-205ENST00000561743 MAP3K12Q12852 859 aa16.45■□□□□ 0.22
USB1-205ENST00000561743 METTL16Q86W50 562 aaKnown RBP16.45■□□□□ 0.22
USB1-205ENST00000561743 SLC45A1Q9Y2W3 748 aa16.45■□□□□ 0.22
USB1-205ENST00000561743 KIAA0100Q14667 2235 aaKnown RBP16.44■□□□□ 0.22
USB1-205ENST00000561743 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
USB1-205ENST00000561743 IFIT2P09913 472 aaKnown RBP16.44■□□□□ 0.22
USB1-205ENST00000561743 PSMC4P43686 418 aa16.44■□□□□ 0.22
USB1-205ENST00000561743 SLC9C1Q4G0N8 1177 aa16.44■□□□□ 0.22
USB1-205ENST00000561743 TMED8Q6PL24 325 aaPredicted RBP16.44■□□□□ 0.22
USB1-205ENST00000561743 CERS3Q8IU89 383 aa16.44■□□□□ 0.22
USB1-205ENST00000561743 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.44■□□□□ 0.22
USB1-205ENST00000561743 ZNF333Q96JL9 665 aa16.44■□□□□ 0.22
USB1-205ENST00000561743 TRIM47Q96LD4 638 aa16.44■□□□□ 0.22
USB1-205ENST00000561743 SAP30BPQ9UHR5 308 aaKnown RBP16.44■□□□□ 0.22
USB1-205ENST00000561743 AGTPBP1Q9UPW5 1226 aa16.44■□□□□ 0.22
USB1-205ENST00000561743 USP17L5A8MUK1 530 aa16.43■□□□□ 0.22
USB1-205ENST00000561743 JAG1P78504 1218 aa16.43■□□□□ 0.22
USB1-205ENST00000561743 SPP2Q13103 211 aa16.43■□□□□ 0.22
USB1-205ENST00000561743 TTF1Q15361 905 aaPredicted RBP16.43■□□□□ 0.22
USB1-205ENST00000561743 TREML2Q5T2D2 321 aa16.43■□□□□ 0.22
USB1-205ENST00000561743 FOXP4Q8IVH2 680 aaPredicted RBP16.43■□□□□ 0.22
USB1-205ENST00000561743 PROCA1Q8NCQ7 364 aaPredicted RBP16.43■□□□□ 0.22
USB1-205ENST00000561743 ZNF280CQ8ND82 737 aa16.43■□□□□ 0.22
USB1-205ENST00000561743 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
USB1-205ENST00000561743 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
USB1-205ENST00000561743 PRMT2P55345 433 aa16.42■□□□□ 0.22
USB1-205ENST00000561743 SHROOM1Q2M3G4 852 aaPredicted RBP16.42■□□□□ 0.22
USB1-205ENST00000561743 SLC4A8Q2Y0W8 1093 aa16.42■□□□□ 0.22
USB1-205ENST00000561743 CRACR2BQ8N4Y2 399 aaPredicted RBP16.42■□□□□ 0.22
USB1-205ENST00000561743 DNAJC2Q99543 621 aaKnown RBP16.42■□□□□ 0.22
USB1-205ENST00000561743 RIOK1Q9BRS2 568 aaKnown RBP16.42■□□□□ 0.22
USB1-205ENST00000561743 MYH8P13535 1937 aa16.42■□□□□ 0.22
USB1-205ENST00000561743 GOLIM4O00461 696 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 HLA-DOAP06340 250 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 ASNSP08243 561 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 PDE6AP16499 860 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 OSBPP22059 807 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 USP5P45974 858 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 HMGCS2P54868 508 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 SLC9C2Q5TAH2 1124 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 NBPF11Q86T75 865 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 SH3TC2Q8TF17 1288 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 SRRDQ9UH36 339 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 MKI67P46013 3256 aaKnown RBP16.41■□□□□ 0.22
USB1-205ENST00000561743 DOCK3Q8IZD9 2030 aa16.41■□□□□ 0.22
USB1-205ENST00000561743 BAZ2AQ9UIF9 1905 aaKnown RBP16.41■□□□□ 0.22
USB1-205ENST00000561743 GDF11O95390 407 aa16.4■□□□□ 0.22
USB1-205ENST00000561743 FMNL1O95466 1100 aaPredicted RBP16.4■□□□□ 0.22
USB1-205ENST00000561743 SH3D19Q5HYK7 790 aa16.4■□□□□ 0.22
USB1-205ENST00000561743 SMCR8Q8TEV9 937 aaPredicted RBP16.4■□□□□ 0.22
USB1-205ENST00000561743 EDC3Q96F86 508 aaKnown RBP16.4■□□□□ 0.22
USB1-205ENST00000561743 WDR18Q9BV38 432 aa16.4■□□□□ 0.22
USB1-205ENST00000561743 AS3MTQ9HBK9 375 aa16.4■□□□□ 0.22
USB1-205ENST00000561743 MYPNQ86TC9 1320 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms