RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 ABCF2Q9UG63 623 aa22.7■■□□□ 1.22
COMMD4-204ENST00000561662 DENND2AQ9ULE3 1009 aa22.7■■□□□ 1.22
COMMD4-204ENST00000561662 PFASO15067 1338 aa22.7■■□□□ 1.22
COMMD4-204ENST00000561662 GAKO14976 1311 aa22.69■■□□□ 1.22
COMMD4-204ENST00000561662 SALL1Q9NSC2 1324 aa22.69■■□□□ 1.22
COMMD4-204ENST00000561662 MDM2Q00987 491 aaPredicted RBP22.69■■□□□ 1.22
COMMD4-204ENST00000561662 MRPL50Q8N5N7 158 aaKnown RBP22.69■■□□□ 1.22
COMMD4-204ENST00000561662 FAM161BQ96MY7 647 aa22.69■■□□□ 1.22
COMMD4-204ENST00000561662 EYSQ5T1H1 3165 aa22.69■■□□□ 1.22
COMMD4-204ENST00000561662 ASCC2Q9H1I8 757 aaPredicted RBP22.68■■□□□ 1.22
COMMD4-204ENST00000561662 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.68■■□□□ 1.22
COMMD4-204ENST00000561662 CEP126Q9P2H0 1117 aa22.68■■□□□ 1.22
COMMD4-204ENST00000561662 OGDHLQ9ULD0 1010 aa22.68■■□□□ 1.22
COMMD4-204ENST00000561662 PRKAR2AP13861 404 aaKnown RBP22.67■■□□□ 1.22
COMMD4-204ENST00000561662 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.67■■□□□ 1.22
COMMD4-204ENST00000561662 PROCA1Q8NCQ7 364 aaPredicted RBP22.67■■□□□ 1.22
COMMD4-204ENST00000561662 GCLCP48506 637 aaPredicted RBP22.66■■□□□ 1.22
COMMD4-204ENST00000561662 RRP1BQ14684 758 aaKnown RBP22.66■■□□□ 1.22
COMMD4-204ENST00000561662 ZNF280CQ8ND82 737 aa22.66■■□□□ 1.22
COMMD4-204ENST00000561662 RASGRF1Q13972 1273 aa22.65■■□□□ 1.22
COMMD4-204ENST00000561662 LRRC26Q2I0M4 334 aa22.65■■□□□ 1.22
COMMD4-204ENST00000561662 CCDC102BQ68D86 513 aa22.65■■□□□ 1.22
COMMD4-204ENST00000561662 GUCD1Q96NT3 240 aa22.65■■□□□ 1.22
COMMD4-204ENST00000561662 PA2G4Q9UQ80 394 aaKnown RBP22.65■■□□□ 1.22
COMMD4-204ENST00000561662 PLXNB2O15031 1838 aa22.64■■□□□ 1.22
COMMD4-204ENST00000561662 MROH7-TTC4A0A0A0MT08 1334 aa22.63■■□□□ 1.21
COMMD4-204ENST00000561662 SEMA3EO15041 775 aa22.63■■□□□ 1.21
COMMD4-204ENST00000561662 ZGPATQ8N5A5 531 aaKnown RBP22.63■■□□□ 1.21
COMMD4-204ENST00000561662 LOC285556D6RIA3 1793 aa22.63■■□□□ 1.21
COMMD4-204ENST00000561662 CCND3P30281 292 aaPredicted RBP22.62■■□□□ 1.21
COMMD4-204ENST00000561662 RHBDL3P58872 404 aa22.62■■□□□ 1.21
COMMD4-204ENST00000561662 MECOMQ03112 1051 aa22.62■■□□□ 1.21
COMMD4-204ENST00000561662 PABPC4Q13310 644 aaKnown RBP eCLIP22.62■■□□□ 1.21
COMMD4-204ENST00000561662 MAP3K21Q5TCX8 1036 aa22.62■■□□□ 1.21
COMMD4-204ENST00000561662 TBC1D12O60347 775 aa22.61■■□□□ 1.21
COMMD4-204ENST00000561662 TIMM10P62072 90 aa22.61■■□□□ 1.21
COMMD4-204ENST00000561662 CACNB2Q08289 660 aaPredicted RBP22.61■■□□□ 1.21
COMMD4-204ENST00000561662 CCL14Q16627 93 aa22.61■■□□□ 1.21
COMMD4-204ENST00000561662 DNAH12Q6ZR08 3092 aa22.61■■□□□ 1.21
COMMD4-204ENST00000561662 ZNF384Q8TF68 577 aa22.61■■□□□ 1.21
COMMD4-204ENST00000561662 P2RX7Q99572 595 aaKnown RBP22.61■■□□□ 1.21
COMMD4-204ENST00000561662 OSBPL5Q9H0X9 879 aaPredicted RBP22.61■■□□□ 1.21
COMMD4-204ENST00000561662 TXNRD2Q9NNW7 524 aa22.61■■□□□ 1.21
COMMD4-204ENST00000561662 PTPRCP08575 1304 aa22.6■■□□□ 1.21
COMMD4-204ENST00000561662 CIAO1O76071 339 aa22.6■■□□□ 1.21
COMMD4-204ENST00000561662 COL6A1P12109 1028 aa22.6■■□□□ 1.21
COMMD4-204ENST00000561662 CAP2P40123 477 aa22.6■■□□□ 1.21
COMMD4-204ENST00000561662 IRX3P78415 501 aaPredicted RBP22.6■■□□□ 1.21
COMMD4-204ENST00000561662 MTMR2Q13614 643 aa22.6■■□□□ 1.21
COMMD4-204ENST00000561662 SLF2Q8IX21 1173 aa22.6■■□□□ 1.21
COMMD4-204ENST00000561662 SSH1Q8WYL5 1049 aa22.6■■□□□ 1.21
COMMD4-204ENST00000561662 NUDT12Q9BQG2 462 aa22.6■■□□□ 1.21
COMMD4-204ENST00000561662 USP17L5A8MUK1 530 aa22.59■■□□□ 1.21
COMMD4-204ENST00000561662 ZKSCAN1P17029 563 aaPredicted RBP22.59■■□□□ 1.21
COMMD4-204ENST00000561662 FAM163AQ96GL9 167 aaPredicted RBP22.59■■□□□ 1.21
COMMD4-204ENST00000561662 MORF4L1Q9UBU8 362 aa22.59■■□□□ 1.21
COMMD4-204ENST00000561662 ATAD5Q96QE3 1844 aa22.59■■□□□ 1.21
COMMD4-204ENST00000561662 GPR75-ASB3A0A0A6YYF3 556 aa22.58■■□□□ 1.21
COMMD4-204ENST00000561662 POTEB2H3BUK9 544 aa22.58■■□□□ 1.21
COMMD4-204ENST00000561662 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.21
COMMD4-204ENST00000561662 SHROOM1Q2M3G4 852 aaPredicted RBP22.58■■□□□ 1.21
COMMD4-204ENST00000561662 SPTY2D1Q68D10 685 aaPredicted RBP22.58■■□□□ 1.21
COMMD4-204ENST00000561662 ERICH6Q7L0X2 663 aa22.58■■□□□ 1.21
COMMD4-204ENST00000561662 PRUNE2Q8WUY3 3088 aa22.58■■□□□ 1.2
COMMD4-204ENST00000561662 UBTFL1P0CB47 393 aaPredicted RBP22.57■■□□□ 1.2
COMMD4-204ENST00000561662 IL15P40933 162 aaPredicted RBP22.57■■□□□ 1.2
COMMD4-204ENST00000561662 SH3D19Q5HYK7 790 aa22.57■■□□□ 1.2
COMMD4-204ENST00000561662 LHX8Q68G74 356 aa22.57■■□□□ 1.2
COMMD4-204ENST00000561662 PI16Q6UXB8 463 aa22.57■■□□□ 1.2
COMMD4-204ENST00000561662 TBC1D9Q6ZT07 1266 aa22.57■■□□□ 1.2
COMMD4-204ENST00000561662 PORCNQ9H237 461 aa22.57■■□□□ 1.2
COMMD4-204ENST00000561662 HERVK_113P62684 666 aa22.56■■□□□ 1.2
COMMD4-204ENST00000561662 JAG1P78504 1218 aa22.56■■□□□ 1.2
COMMD4-204ENST00000561662 PDE3AQ14432 1141 aa22.56■■□□□ 1.2
COMMD4-204ENST00000561662 Q3C1V9 767 aa22.56■■□□□ 1.2
COMMD4-204ENST00000561662 GPRC5AQ8NFJ5 357 aa22.56■■□□□ 1.2
COMMD4-204ENST00000561662 YTHDC1Q96MU7 727 aaKnown RBP22.56■■□□□ 1.2
COMMD4-204ENST00000561662 PAGR1Q9BTK6 254 aa22.56■■□□□ 1.2
COMMD4-204ENST00000561662 SPTBN5Q9NRC6 3674 aaKnown RBP22.55■■□□□ 1.2
COMMD4-204ENST00000561662 ATN1P54259 1190 aaPredicted RBP22.55■■□□□ 1.2
COMMD4-204ENST00000561662 CCAR1Q8IX12 1150 aaKnown RBP22.55■■□□□ 1.2
COMMD4-204ENST00000561662 SOCS4Q8WXH5 440 aa22.55■■□□□ 1.2
COMMD4-204ENST00000561662 SENP6Q9GZR1 1112 aaPredicted RBP22.55■■□□□ 1.2
COMMD4-204ENST00000561662 AS3MTQ9HBK9 375 aa22.55■■□□□ 1.2
COMMD4-204ENST00000561662 TMOD4Q9NZQ9 345 aa22.55■■□□□ 1.2
COMMD4-204ENST00000561662 FBXO3Q9UK99 471 aa22.55■■□□□ 1.2
COMMD4-204ENST00000561662 NDUFB9Q9Y6M9 179 aa22.55■■□□□ 1.2
COMMD4-204ENST00000561662 XRCC5P13010 732 aaKnown RBP22.54■■□□□ 1.2
COMMD4-204ENST00000561662 XAGE2Q96GT9 111 aa22.54■■□□□ 1.2
COMMD4-204ENST00000561662 LBHD1Q9BQE6 289 aaPredicted RBP22.54■■□□□ 1.2
COMMD4-204ENST00000561662 RBPJLQ9UBG7 517 aa22.54■■□□□ 1.2
COMMD4-204ENST00000561662 ZNF521Q96K83 1311 aa22.54■■□□□ 1.2
COMMD4-204ENST00000561662 CDH23Q9H251 3354 aa22.53■■□□□ 1.2
COMMD4-204ENST00000561662 A0A1B0GUL7 405 aa22.53■■□□□ 1.2
COMMD4-204ENST00000561662 BACE1P56817 501 aa22.53■■□□□ 1.2
COMMD4-204ENST00000561662 GPR142Q7Z601 462 aa22.53■■□□□ 1.2
COMMD4-204ENST00000561662 TEX11Q8IYF3 940 aa22.53■■□□□ 1.2
COMMD4-204ENST00000561662 USP6NLQ92738 828 aa22.53■■□□□ 1.2
COMMD4-204ENST00000561662 TBC1D2Q9BYX2 928 aa22.53■■□□□ 1.2
COMMD4-204ENST00000561662 RAI14Q9P0K7 980 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms