RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 CHD1LQ86WJ1 897 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 ERO1BQ86YB8 467 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 STK11IPQ8N1F8 1099 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 KBTBD3Q8NAB2 608 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 DDRGK1Q96HY6 314 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 DHX36Q9H2U1 1008 aaKnown RBP12.2□□□□□ -0.46
HERC1-212ENST00000561348 MCM9Q9NXL9 1143 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 SLC4A4Q9Y6R1 1079 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 ZHX2Q9Y6X8 837 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 RFX7Q2KHR2 1363 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 TCRBV5S4A2TA0A5A2 114 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 UNCXA6NJT0 531 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 IRF6O14896 467 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 GDF11O95390 407 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 APPP05067 770 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 GTF2A2P52657 109 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 PDE1AP54750 535 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 OTUD7BQ6GQQ9 843 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 CERS3Q8IU89 383 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 SMC5Q8IY18 1101 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
HERC1-212ENST00000561348 SCYL3Q8IZE3 742 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 PI4K2BQ8TCG2 481 aa12.19□□□□□ -0.46
HERC1-212ENST00000561348 RIOK1Q9BRS2 568 aaKnown RBP12.19□□□□□ -0.46
HERC1-212ENST00000561348 PUS7LQ9H0K6 701 aaKnown RBP12.19□□□□□ -0.46
HERC1-212ENST00000561348 MYH1P12882 1939 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 SPDYE5A6NIY4 337 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 TRIM75PA6NK02 468 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 RNF113AO15541 343 aaKnown RBP12.18□□□□□ -0.46
HERC1-212ENST00000561348 IGSF3O75054 1194 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 NEFLP07196 543 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 TM4SF4P48230 202 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 INHBEP58166 350 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 SNAPC2Q13487 334 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 LRRFIP1Q32MZ4 808 aaKnown RBP12.18□□□□□ -0.46
HERC1-212ENST00000561348 GADL1Q6ZQY3 521 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 TTC6Q86TZ1 520 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 IFNL1Q8IU54 200 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 AMOTL1Q8IY63 956 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 TNS4Q8IZW8 715 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 ZNF112Q9UJU3 913 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 THSD7BQ9C0I4 1608 aa12.18□□□□□ -0.46
HERC1-212ENST00000561348 CDK5RAP2Q96SN8 1893 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 PHF20L1A8MW92 1017 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 IGF2BP3O00425 579 aaKnown RBP eCLIP12.17□□□□□ -0.46
HERC1-212ENST00000561348 MPHOSPH10O00566 681 aaKnown RBP12.17□□□□□ -0.46
HERC1-212ENST00000561348 CTNND1O60716 968 aaKnown RBP12.17□□□□□ -0.46
HERC1-212ENST00000561348 CYP2D6P10635 497 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 CETPP11597 493 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 NUCB1Q02818 461 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 PPATQ06203 517 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 PPIL2Q13356 520 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 UBE3CQ15386 1083 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 FOXP4Q8IVH2 680 aaPredicted RBP12.17□□□□□ -0.46
HERC1-212ENST00000561348 SEC62Q99442 399 aaKnown RBP12.17□□□□□ -0.46
HERC1-212ENST00000561348 HERC5Q9UII4 1024 aaKnown RBP12.17□□□□□ -0.46
HERC1-212ENST00000561348 CASP8AP2Q9UKL3 1982 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 MYH7P12883 1935 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 ATRNL1Q5VV63 1379 aa12.17□□□□□ -0.46
HERC1-212ENST00000561348 CYP2D7A0A087X1C5 515 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 MINDY4BA8MYZ0 360 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 M0R2C6 588 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 ZFYP08048 801 aaPredicted RBP12.16□□□□□ -0.46
HERC1-212ENST00000561348 PTPRAP18433 802 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 PLCD1P51178 756 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 EVX2Q03828 476 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 TAF1CQ15572 869 aaPredicted RBP12.16□□□□□ -0.46
HERC1-212ENST00000561348 TMED8Q6PL24 325 aaPredicted RBP12.16□□□□□ -0.46
HERC1-212ENST00000561348 BRI3BPQ8WY22 251 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 APPBP2Q92624 585 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 PTPN18Q99952 460 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 R3HDMLQ9H3Y0 253 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 DCP1AQ9NPI6 582 aaPredicted RBP12.16□□□□□ -0.46
HERC1-212ENST00000561348 SERPINB13Q9UIV8 391 aa12.16□□□□□ -0.46
HERC1-212ENST00000561348 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 USP17L21D6R901 530 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 GPAA1O43292 621 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 TBC1D12O60347 775 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 CAP2P40123 477 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 TDO2P48775 406 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 SPP2Q13103 211 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 RRP1BQ14684 758 aaKnown RBP12.15□□□□□ -0.46
HERC1-212ENST00000561348 RAB3GAP1Q15042 981 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 SHROOM1Q2M3G4 852 aaPredicted RBP12.15□□□□□ -0.46
HERC1-212ENST00000561348 NOL9Q5SY16 702 aaKnown RBP12.15□□□□□ -0.46
HERC1-212ENST00000561348 FAM43AQ8N2R8 423 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 OSBP2Q969R2 916 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 EVI5LQ96CN4 794 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 DYNLL2Q96FJ2 89 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 MS4A4AQ96JQ5 239 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 PRDM10Q9NQV6 1147 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 SAGE1Q9NXZ1 904 aa12.15□□□□□ -0.46
HERC1-212ENST00000561348 NAV1Q8NEY1 1877 aa12.14□□□□□ -0.47
HERC1-212ENST00000561348 CENPBP07199 599 aaPredicted RBP12.14□□□□□ -0.47
HERC1-212ENST00000561348 CRHR2Q13324 411 aa12.14□□□□□ -0.47
HERC1-212ENST00000561348 ZYXQ15942 572 aaKnown RBP12.14□□□□□ -0.47
HERC1-212ENST00000561348 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
HERC1-212ENST00000561348 CCDC129Q6ZRS4 1044 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms