RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ASNSP08243 561 aa12.74□□□□□ -0.37
TPM1-229ENST00000561242 MAP2K2P36507 400 aa12.74□□□□□ -0.37
TPM1-229ENST00000561242 RNF20Q5VTR2 975 aa12.74□□□□□ -0.37
TPM1-229ENST00000561242 CYP4F22Q6NT55 531 aa12.74□□□□□ -0.37
TPM1-229ENST00000561242 DLK2Q6UY11 383 aa12.74□□□□□ -0.37
TPM1-229ENST00000561242 ERO1BQ86YB8 467 aa12.74□□□□□ -0.37
TPM1-229ENST00000561242 IFNL3Q8IZI9 196 aa12.74□□□□□ -0.37
TPM1-229ENST00000561242 FEZ1Q99689 392 aa12.74□□□□□ -0.37
TPM1-229ENST00000561242 DDX4Q9NQI0 724 aaKnown RBP12.74□□□□□ -0.37
TPM1-229ENST00000561242 TMOD4Q9NZQ9 345 aa12.74□□□□□ -0.37
TPM1-229ENST00000561242 RAD50Q92878 1312 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 M0R2C6 588 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 MCCP23508 829 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 GTF2A2P52657 109 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
TPM1-229ENST00000561242 PABPC4Q13310 644 aaKnown RBP eCLIP12.73□□□□□ -0.37
TPM1-229ENST00000561242 SNAPC2Q13487 334 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 RAB3GAP1Q15042 981 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 MAP3K11Q16584 847 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 ABCB5Q2M3G0 1257 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 ZFPM1Q8IX07 1006 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 SCYL3Q8IZE3 742 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 STK11IPQ8N1F8 1099 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 KLRG1Q96E93 195 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 EHD4Q9H223 541 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 SH2D4AQ9H788 454 aa12.73□□□□□ -0.37
TPM1-229ENST00000561242 CNTNAP1P78357 1384 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 USP17L5A8MUK1 530 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 RAD21O60216 631 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 REC8O95072 547 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 ALDH1A1P00352 501 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 ZBTB48P10074 688 aaPredicted RBP12.72□□□□□ -0.37
TPM1-229ENST00000561242 CETPP11597 493 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 ATP2B2Q01814 1243 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 PPATQ06203 517 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 MOB2Q70IA6 237 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 FASTKD5Q7L8L6 764 aaKnown RBP12.72□□□□□ -0.37
TPM1-229ENST00000561242 ZKSCAN4Q969J2 545 aaPredicted RBP12.72□□□□□ -0.37
TPM1-229ENST00000561242 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 FAM227BQ96M60 508 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 TEPSINQ96N21 525 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 SEC62Q99442 399 aaKnown RBP12.72□□□□□ -0.37
TPM1-229ENST00000561242 ARHGEF10LQ9HCE6 1279 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 ANO2Q9NQ90 1003 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 ISY1Q9ULR0 285 aaKnown RBP12.72□□□□□ -0.37
TPM1-229ENST00000561242 ZHX2Q9Y6X8 837 aa12.72□□□□□ -0.37
TPM1-229ENST00000561242 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
TPM1-229ENST00000561242 TSPY3P0CV98 308 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 TSPY8P0CW00 308 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 CHMLP26374 656 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 VEGFBP49765 207 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 HTRA3P83110 453 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 VGLL4Q14135 290 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 SLFNL1Q499Z3 407 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 SBK1Q52WX2 424 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 RRP12Q5JTH9 1297 aaKnown RBP12.71□□□□□ -0.37
TPM1-229ENST00000561242 CTR9Q6PD62 1173 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 CCDC129Q6ZRS4 1044 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 MFSD6Q6ZSS7 791 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 CTDP1Q9Y5B0 961 aaPredicted RBP12.71□□□□□ -0.37
TPM1-229ENST00000561242 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
TPM1-229ENST00000561242 SCN9AQ15858 1988 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 A0A0D9SFI3 127 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 ERICH2A1L162 156 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 TSPY2A6NKD2 308 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 GSG1L2A8MUP6 293 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 CA12O43570 354 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 PCP11498 1178 aaKnown RBP12.7□□□□□ -0.38
TPM1-229ENST00000561242 ZKSCAN1P17029 563 aaPredicted RBP12.7□□□□□ -0.38
TPM1-229ENST00000561242 CAP2P40123 477 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 NT5C2P49902 561 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 USP14P54578 494 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 PPARAQ07869 468 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 ARHGEF6Q15052 776 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 CCDC178Q5BJE1 867 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 LDLRAD1Q5T700 205 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 C12orf60Q5U649 245 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 RALYLQ86SE5 291 aaKnown RBP12.7□□□□□ -0.38
TPM1-229ENST00000561242 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.7□□□□□ -0.38
TPM1-229ENST00000561242 DSCC1Q9BVC3 393 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 ARAP2Q8WZ64 1704 aa12.7□□□□□ -0.38
TPM1-229ENST00000561242 ATRNL1Q5VV63 1379 aa12.69□□□□□ -0.38
TPM1-229ENST00000561242 CXCL11O14625 94 aa12.69□□□□□ -0.38
TPM1-229ENST00000561242 RANBP6O60518 1105 aaKnown RBP12.69□□□□□ -0.38
TPM1-229ENST00000561242 SLC10A3P09131 477 aa12.69□□□□□ -0.38
TPM1-229ENST00000561242 HSPD1P10809 573 aaKnown RBP12.69□□□□□ -0.38
TPM1-229ENST00000561242 GSPT1P15170 499 aaKnown RBP12.69□□□□□ -0.38
TPM1-229ENST00000561242 INPP5BP32019 993 aa12.69□□□□□ -0.38
TPM1-229ENST00000561242 CDK8P49336 464 aa12.69□□□□□ -0.38
TPM1-229ENST00000561242 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
TPM1-229ENST00000561242 PPIL2Q13356 520 aa12.69□□□□□ -0.38
TPM1-229ENST00000561242 ALX1Q15699 326 aa12.69□□□□□ -0.38
TPM1-229ENST00000561242 NOL9Q5SY16 702 aaKnown RBP12.69□□□□□ -0.38
TPM1-229ENST00000561242 SPRYD7Q5W111 196 aa12.69□□□□□ -0.38
TPM1-229ENST00000561242 GADL1Q6ZQY3 521 aa12.69□□□□□ -0.38
TPM1-229ENST00000561242 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
TPM1-229ENST00000561242 CCAR1Q8IX12 1150 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms