RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 NDOR1Q9UHB4 597 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 TAGLN3Q9UI15 199 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 TRHDEQ9UKU6 1024 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 CYP8B1Q9UNU6 501 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 FAM50BQ9Y247 325 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 LUC7L2Q9Y383 392 aaKnown RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 WASF2Q9Y6W5 498 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 WASHC2AQ641Q2 1341 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 FRMPD2Q68DX3 1309 aaPredicted RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 A0A087X0B3 334 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 FAM86C2PA6NEL3 165 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 B4E1Z4 1266 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 BHMG1C9JSJ3 638 aaPredicted RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 NOP56O00567 594 aaKnown RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 ERC2O15083 957 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 GPR39O43194 453 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 TIMM44O43615 452 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 SUSD5O60279 629 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 GRIN3BO60391 1043 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 KPNA6O60684 536 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 LILRA1O75019 489 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 RFPL1O75677 317 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 RGS20O76081 388 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 NPTXRO95502 500 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 LDHCP07864 332 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 MYBL2P10244 700 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 RARAP10276 462 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 TRIM27P14373 513 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 GARTP22102 1010 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 INPP5BP32019 993 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 CYP2C19P33261 490 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 PTGIRP43119 386 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 PHKA2P46019 1235 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 CCT5P48643 541 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 ZNF157P51786 506 aaPredicted RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 IL2P60568 153 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 SUMO1P63165 101 aaKnown RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 RELBQ01201 579 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 ADCY1Q08828 1119 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 FAPQ12884 760 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 HYAL2Q12891 473 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 STK3Q13188 491 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 MTMR1Q13613 665 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 KCTD2Q14681 263 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 STAT4Q14765 748 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 CBX2Q14781 532 aaPredicted RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 PUM3Q15397 648 aaKnown RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 TRIP4Q15650 581 aaPredicted RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 TMEM95Q3KNT9 176 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 BBS9Q3SYG4 887 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 CFAP100Q494V2 611 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 RRP12Q5JTH9 1297 aaKnown RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 SYDE2Q5VT97 1194 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 LLGL2Q6P1M3 1020 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 ADGRD1Q6QNK2 874 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 POTEEQ6S8J3 1075 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 LRRC69Q6ZNQ3 347 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 MMS22LQ6ZRQ5 1243 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 MORC1Q86VD1 984 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 FCHSD1Q86WN1 690 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 SCUBE1Q8IWY4 988 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 SPICE1Q8N0Z3 855 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 AFAP1L2Q8N4X5 818 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 CNTD1Q8N815 330 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 JMYQ8N9B5 988 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 ZNF280CQ8ND82 737 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 C1orf131Q8NDD1 294 aaKnown RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 PPHLN1Q8NEY8 458 aaKnown RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 PJA1Q8NG27 643 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 DDX1Q92499 740 aaKnown RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 CCT6BQ92526 530 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 ACSBG1Q96GR2 724 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 CDK5RAP3Q96JB5 506 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 LRGUKQ96M69 825 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 GPR101Q96P66 508 aaPredicted RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 NECAB3Q96P71 396 aaPredicted RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 MTRQ99707 1265 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 AARSD1Q9BTE6 412 aaKnown RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 MRPL4Q9BYD3 311 aaKnown RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 FAM126AQ9BYI3 521 aaPredicted RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 CCDC8Q9H0W5 538 aaPredicted RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 IFT22Q9H7X7 185 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 ABCB6Q9NP58 842 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 MAN1C1Q9NR34 630 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 STRN4Q9NRL3 753 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 LATS2Q9NRM7 1088 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 OBP2AQ9NY56 170 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.5□□□□□ -2.01
RTF1-207ENST00000561076 APOBEC2Q9Y235 224 aaKnown RBP2.5□□□□□ -2.01
RTF1-207ENST00000561076 BCS1LQ9Y276 419 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 ANKRD6Q9Y2G4 727 aa2.5□□□□□ -2.01
RTF1-207ENST00000561076 A0A096LPE4 126 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 A0A1W2PPZ6 126 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 hCG_1642624A0A1W2PR95 340 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 GSG1L2A8MUP6 293 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 F5H423 210 aaPredicted RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 ZEB2O60315 1214 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 GAS7O60861 476 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 EFCAB14O75071 495 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 SASH3O75995 380 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms