RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 APBB1O00213 710 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 CTNND1O60716 968 aaKnown RBP19.51■□□□□ 0.71
LMX1B-204ENST00000561065 CTGFP29279 349 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 DYNLL1P63167 89 aaKnown RBP19.51■□□□□ 0.71
LMX1B-204ENST00000561065 C17orf99Q6UX52 265 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 RPAP2Q8IXW5 612 aaPredicted RBP19.51■□□□□ 0.71
LMX1B-204ENST00000561065 DNAJC18Q9H819 358 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 PICK1Q9NRD5 415 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 CXCL11O14625 94 aa19.5■□□□□ 0.71
LMX1B-204ENST00000561065 HMMRO75330 724 aa19.5■□□□□ 0.71
LMX1B-204ENST00000561065 IDH1O75874 414 aaKnown RBP19.5■□□□□ 0.71
LMX1B-204ENST00000561065 HSP90AB4PQ58FF6 505 aa19.5■□□□□ 0.71
LMX1B-204ENST00000561065 MAPKAPK5Q8IW41 473 aa19.5■□□□□ 0.71
LMX1B-204ENST00000561065 TGFBRAP1Q8WUH2 860 aa19.5■□□□□ 0.71
LMX1B-204ENST00000561065 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.5■□□□□ 0.71
LMX1B-204ENST00000561065 CPA4Q9UI42 421 aa19.5■□□□□ 0.71
LMX1B-204ENST00000561065 PDE4DIPQ5VU43 2346 aa19.49■□□□□ 0.71
LMX1B-204ENST00000561065 CYP7A1P22680 504 aa19.49■□□□□ 0.71
LMX1B-204ENST00000561065 LACTBP83111 547 aaPredicted RBP19.49■□□□□ 0.71
LMX1B-204ENST00000561065 NOL10Q9BSC4 688 aaKnown RBP19.49■□□□□ 0.71
LMX1B-204ENST00000561065 MYH7P12883 1935 aa19.48■□□□□ 0.71
LMX1B-204ENST00000561065 BAG3O95817 575 aa19.48■□□□□ 0.71
LMX1B-204ENST00000561065 CYP2C8P10632 490 aa19.48■□□□□ 0.71
LMX1B-204ENST00000561065 SHROOM1Q2M3G4 852 aaPredicted RBP19.48■□□□□ 0.71
LMX1B-204ENST00000561065 MAGEB6Q8N7X4 407 aa19.48■□□□□ 0.71
LMX1B-204ENST00000561065 MIGA1Q8NAN2 632 aa19.48■□□□□ 0.71
LMX1B-204ENST00000561065 KIF1BPQ96EK5 621 aa19.48■□□□□ 0.71
LMX1B-204ENST00000561065 PTCH2Q9Y6C5 1203 aa19.48■□□□□ 0.71
LMX1B-204ENST00000561065 KIAA0100Q14667 2235 aaKnown RBP19.47■□□□□ 0.71
LMX1B-204ENST00000561065 TRIM75PA6NK02 468 aa19.47■□□□□ 0.71
LMX1B-204ENST00000561065 ECM2O94769 699 aaPredicted RBP19.47■□□□□ 0.71
LMX1B-204ENST00000561065 PLCG2P16885 1265 aa19.47■□□□□ 0.71
LMX1B-204ENST00000561065 JAG1P78504 1218 aa19.47■□□□□ 0.71
LMX1B-204ENST00000561065 ARMC5Q96C12 935 aa19.47■□□□□ 0.71
LMX1B-204ENST00000561065 POTEFA5A3E0 1075 aa19.46■□□□□ 0.71
LMX1B-204ENST00000561065 IGSF3O75054 1194 aa19.46■□□□□ 0.71
LMX1B-204ENST00000561065 BCRP11274 1271 aa19.46■□□□□ 0.71
LMX1B-204ENST00000561065 CAP2P40123 477 aa19.46■□□□□ 0.71
LMX1B-204ENST00000561065 SLC4A8Q2Y0W8 1093 aa19.46■□□□□ 0.71
LMX1B-204ENST00000561065 GADL1Q6ZQY3 521 aa19.46■□□□□ 0.71
LMX1B-204ENST00000561065 PARK7Q99497 189 aaKnown RBP19.46■□□□□ 0.71
LMX1B-204ENST00000561065 SAP30BPQ9UHR5 308 aaKnown RBP19.46■□□□□ 0.71
LMX1B-204ENST00000561065 HERC5Q9UII4 1024 aaKnown RBP19.46■□□□□ 0.71
LMX1B-204ENST00000561065 PALD1Q9ULE6 856 aa19.46■□□□□ 0.71
LMX1B-204ENST00000561065 METTL16Q86W50 562 aaKnown RBP19.45■□□□□ 0.7
LMX1B-204ENST00000561065 CLASRPQ8N2M8 674 aaKnown RBP19.45■□□□□ 0.7
LMX1B-204ENST00000561065 EDC3Q96F86 508 aaKnown RBP19.45■□□□□ 0.7
LMX1B-204ENST00000561065 DHX36Q9H2U1 1008 aaKnown RBP19.45■□□□□ 0.7
LMX1B-204ENST00000561065 PI4KBQ9UBF8 816 aa19.45■□□□□ 0.7
LMX1B-204ENST00000561065 TREML2Q5T2D2 321 aa19.44■□□□□ 0.7
LMX1B-204ENST00000561065 FASTKD5Q7L8L6 764 aaKnown RBP19.44■□□□□ 0.7
LMX1B-204ENST00000561065 TRIM47Q96LD4 638 aa19.44■□□□□ 0.7
LMX1B-204ENST00000561065 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.43■□□□□ 0.7
LMX1B-204ENST00000561065 ZNF333Q96JL9 665 aa19.43■□□□□ 0.7
LMX1B-204ENST00000561065 YTHDC1Q96MU7 727 aaKnown RBP19.43■□□□□ 0.7
LMX1B-204ENST00000561065 RIOK1Q9BRS2 568 aaKnown RBP19.43■□□□□ 0.7
LMX1B-204ENST00000561065 BCL11AQ9H165 835 aa19.43■□□□□ 0.7
LMX1B-204ENST00000561065 RAB11FIP3O75154 756 aa19.42■□□□□ 0.7
LMX1B-204ENST00000561065 IFIT2P09913 472 aaKnown RBP19.42■□□□□ 0.7
LMX1B-204ENST00000561065 PDE6AP16499 860 aa19.42■□□□□ 0.7
LMX1B-204ENST00000561065 MAP3K12Q12852 859 aa19.42■□□□□ 0.7
LMX1B-204ENST00000561065 SPP2Q13103 211 aa19.42■□□□□ 0.7
LMX1B-204ENST00000561065 ZNF280CQ8ND82 737 aa19.42■□□□□ 0.7
LMX1B-204ENST00000561065 DNAJC2Q99543 621 aaKnown RBP19.42■□□□□ 0.7
LMX1B-204ENST00000561065 AGTPBP1Q9UPW5 1226 aa19.42■□□□□ 0.7
LMX1B-204ENST00000561065 SLC45A1Q9Y2W3 748 aa19.42■□□□□ 0.7
LMX1B-204ENST00000561065 GOLIM4O00461 696 aa19.41■□□□□ 0.7
LMX1B-204ENST00000561065 GDF11O95390 407 aa19.41■□□□□ 0.7
LMX1B-204ENST00000561065 OSBPP22059 807 aa19.41■□□□□ 0.7
LMX1B-204ENST00000561065 PSMC4P43686 418 aa19.41■□□□□ 0.7
LMX1B-204ENST00000561065 KIF22Q14807 665 aa19.41■□□□□ 0.7
LMX1B-204ENST00000561065 DOCK3Q8IZD9 2030 aa19.41■□□□□ 0.7
LMX1B-204ENST00000561065 BAZ2AQ9UIF9 1905 aaKnown RBP19.4■□□□□ 0.7
LMX1B-204ENST00000561065 TCRBV5S4A2TA0A5A2 114 aa19.4■□□□□ 0.7
LMX1B-204ENST00000561065 SMARCA5O60264 1052 aaPredicted RBP19.4■□□□□ 0.7
LMX1B-204ENST00000561065 HMGCS2P54868 508 aa19.4■□□□□ 0.7
LMX1B-204ENST00000561065 ARHGEF6Q15052 776 aa19.4■□□□□ 0.7
LMX1B-204ENST00000561065 SLFNL1Q499Z3 407 aa19.4■□□□□ 0.7
LMX1B-204ENST00000561065 SLC9C1Q4G0N8 1177 aa19.4■□□□□ 0.7
LMX1B-204ENST00000561065 SH3TC2Q8TF17 1288 aa19.4■□□□□ 0.7
LMX1B-204ENST00000561065 USP17L5A8MUK1 530 aa19.39■□□□□ 0.69
LMX1B-204ENST00000561065 CHGBP05060 677 aa19.39■□□□□ 0.69
LMX1B-204ENST00000561065 EVX2Q03828 476 aa19.39■□□□□ 0.69
LMX1B-204ENST00000561065 CRACR2BQ8N4Y2 399 aaPredicted RBP19.39■□□□□ 0.69
LMX1B-204ENST00000561065 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
LMX1B-204ENST00000561065 SRRDQ9UH36 339 aa19.39■□□□□ 0.69
LMX1B-204ENST00000561065 ZBTB21Q9ULJ3 1066 aa19.39■□□□□ 0.69
LMX1B-204ENST00000561065 MYH8P13535 1937 aa19.38■□□□□ 0.69
LMX1B-204ENST00000561065 ZNF532Q9HCE3 1301 aa19.38■□□□□ 0.69
LMX1B-204ENST00000561065 GNRH1P01148 92 aa19.38■□□□□ 0.69
LMX1B-204ENST00000561065 HLA-DOAP06340 250 aa19.38■□□□□ 0.69
LMX1B-204ENST00000561065 USP5P45974 858 aa19.38■□□□□ 0.69
LMX1B-204ENST00000561065 MTMR2Q13614 643 aa19.38■□□□□ 0.69
LMX1B-204ENST00000561065 TTF1Q15361 905 aaPredicted RBP19.38■□□□□ 0.69
LMX1B-204ENST00000561065 SH3D19Q5HYK7 790 aa19.38■□□□□ 0.69
LMX1B-204ENST00000561065 SLC9C2Q5TAH2 1124 aa19.38■□□□□ 0.69
LMX1B-204ENST00000561065 TMED8Q6PL24 325 aaPredicted RBP19.38■□□□□ 0.69
LMX1B-204ENST00000561065 CERS3Q8IU89 383 aa19.38■□□□□ 0.69
LMX1B-204ENST00000561065 FOXP4Q8IVH2 680 aaPredicted RBP19.38■□□□□ 0.69
LMX1B-204ENST00000561065 TBC1D2Q9BYX2 928 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms