RNA–Protein interactions for RNA: ENST00000560980.5

LRRC49-226, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 1,443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-226ENST00000560980 LRRCC1Q9C099 1032 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 ATP13A2Q9NQ11 1180 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 AOX1Q06278 1338 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 SALL3Q9BXA9 1300 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 LRP5O75197 1615 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 A6NJY4 79 aa7.99□□□□□ -1.13
LRRC49-226ENST00000560980 CTSOP43234 321 aaPredicted RBP7.99□□□□□ -1.13
LRRC49-226ENST00000560980 CLEC4GQ6UXB4 293 aa7.99□□□□□ -1.13
LRRC49-226ENST00000560980 ZNF34Q8IZ26 560 aa7.99□□□□□ -1.13
LRRC49-226ENST00000560980 KIF1BPQ96EK5 621 aa7.99□□□□□ -1.13
LRRC49-226ENST00000560980 ZSCAN10Q96SZ4 725 aaPredicted RBP7.99□□□□□ -1.13
LRRC49-226ENST00000560980 BICC1Q9H694 974 aaKnown RBP7.99□□□□□ -1.13
LRRC49-226ENST00000560980 COPRSQ9NQ92 184 aa7.99□□□□□ -1.13
LRRC49-226ENST00000560980 EIF5BO60841 1220 aaKnown RBP7.98□□□□□ -1.13
LRRC49-226ENST00000560980 RPS6KA4O75676 772 aa7.98□□□□□ -1.13
LRRC49-226ENST00000560980 SURF6O75683 361 aaKnown RBP7.98□□□□□ -1.13
LRRC49-226ENST00000560980 CAMTA2O94983 1202 aa7.98□□□□□ -1.13
LRRC49-226ENST00000560980 GPC1P35052 558 aa7.98□□□□□ -1.13
LRRC49-226ENST00000560980 PARP10Q53GL7 1025 aa7.98□□□□□ -1.13
LRRC49-226ENST00000560980 TMEM214Q6NUQ4 689 aaKnown RBP7.98□□□□□ -1.13
LRRC49-226ENST00000560980 NLRP10Q86W26 655 aa7.98□□□□□ -1.13
LRRC49-226ENST00000560980 ZBTB38Q8NAP3 1195 aaPredicted RBP7.98□□□□□ -1.13
LRRC49-226ENST00000560980 LINC00116Q8NCU8 138 aa7.98□□□□□ -1.13
LRRC49-226ENST00000560980 STAP2Q9UGK3 403 aa7.98□□□□□ -1.13
LRRC49-226ENST00000560980 GNEQ9Y223 722 aaKnown RBP7.98□□□□□ -1.13
LRRC49-226ENST00000560980 EXOC6BQ9Y2D4 811 aa7.98□□□□□ -1.13
LRRC49-226ENST00000560980 ZNF652Q9Y2D9 606 aa7.98□□□□□ -1.13
LRRC49-226ENST00000560980 USP42Q9H9J4 1324 aaKnown RBP7.97□□□□□ -1.13
LRRC49-226ENST00000560980 TTLL8A6PVC2 850 aa7.97□□□□□ -1.13
LRRC49-226ENST00000560980 PRMT3O60678 531 aa7.97□□□□□ -1.13
LRRC49-226ENST00000560980 HSP90B1P14625 803 aaKnown RBP7.97□□□□□ -1.13
LRRC49-226ENST00000560980 ATP2B4P23634 1241 aa7.97□□□□□ -1.13
LRRC49-226ENST00000560980 RFX5P48382 616 aaPredicted RBP7.97□□□□□ -1.13
LRRC49-226ENST00000560980 FOXO4P98177 505 aa7.97□□□□□ -1.13
LRRC49-226ENST00000560980 SUZ12Q15022 739 aaKnown RBP7.97□□□□□ -1.13
LRRC49-226ENST00000560980 EPHA10Q5JZY3 1008 aa7.97□□□□□ -1.13
LRRC49-226ENST00000560980 RHPN1Q8TCX5 695 aa7.97□□□□□ -1.13
LRRC49-226ENST00000560980 CCNL1Q9UK58 526 aaPredicted RBP7.97□□□□□ -1.13
LRRC49-226ENST00000560980 MYH13Q9UKX3 1938 aa7.97□□□□□ -1.13
LRRC49-226ENST00000560980 AKAP11Q9UKA4 1901 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 RXRBP28702 533 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 SCNN1AP37088 669 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 RNF144AP50876 292 aaPredicted RBP7.96□□□□□ -1.13
LRRC49-226ENST00000560980 PDE1AP54750 535 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 HLFQ16534 295 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 OCLNQ16625 522 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 GNASQ5JWF2 1037 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 TTC22Q5TAA0 569 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 PTF1AQ7RTS3 328 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 SLC9A9Q8IVB4 645 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 PRIMPOLQ96LW4 560 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 TSPAN10Q9H1Z9 355 aaPredicted RBP7.96□□□□□ -1.13
LRRC49-226ENST00000560980 CHMP3Q9Y3E7 222 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 HRH3Q9Y5N1 445 aa7.96□□□□□ -1.13
LRRC49-226ENST00000560980 TAF1P21675 1872 aa7.96□□□□□ -1.14
LRRC49-226ENST00000560980 RTL9Q8NET4 1388 aa7.96□□□□□ -1.14
LRRC49-226ENST00000560980 NRXN2Q9P2S2 1712 aa7.96□□□□□ -1.14
LRRC49-226ENST00000560980 TTC41PQ6P2S7 1318 aa7.96□□□□□ -1.14
LRRC49-226ENST00000560980 FIGNL2A6NMB9 653 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 PLSCR1O15162 318 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 CSF1RP07333 972 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 PTPN12Q05209 780 aaKnown RBP7.95□□□□□ -1.14
LRRC49-226ENST00000560980 G3BP1Q13283 466 aaKnown RBP eCLIP7.95□□□□□ -1.14
LRRC49-226ENST00000560980 MTFR1Q15390 333 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 TBCELQ5QJ74 424 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 FAM182BQ5T319 152 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 TMCO4Q5TGY1 634 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 FOXD4L5Q5VV16 416 aaPredicted RBP7.95□□□□□ -1.14
LRRC49-226ENST00000560980 LMBR1LQ6UX01 489 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 PRICKLE2Q7Z3G6 844 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 SCG3Q8WXD2 468 aaKnown RBP7.95□□□□□ -1.14
LRRC49-226ENST00000560980 FHDC1Q9C0D6 1143 aaPredicted RBP7.95□□□□□ -1.14
LRRC49-226ENST00000560980 SCHIP1Q9P0W5 487 aaPredicted RBP7.95□□□□□ -1.14
LRRC49-226ENST00000560980 NARFQ9UHQ1 456 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 RIC1Q4ADV7 1423 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 UBN2Q6ZU65 1347 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 CDK2AP1O14519 115 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 PPP1R12BO60237 982 aaPredicted RBP7.95□□□□□ -1.14
LRRC49-226ENST00000560980 SMARCA5O60264 1052 aaPredicted RBP7.95□□□□□ -1.14
LRRC49-226ENST00000560980 MAN1A2O60476 641 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 PDE8AO60658 829 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 CIAO1O76071 339 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 MX1P20591 662 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 EPHA4P54764 986 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 LYSMD3Q7Z3D4 306 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 CLASRPQ8N2M8 674 aaKnown RBP7.95□□□□□ -1.14
LRRC49-226ENST00000560980 RNF217Q8TC41 542 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 SENP2Q9HC62 589 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 GPR108Q9NPR9 543 aa7.95□□□□□ -1.14
LRRC49-226ENST00000560980 RTCBQ9Y3I0 505 aaKnown RBP7.95□□□□□ -1.14
LRRC49-226ENST00000560980 SH3TC1Q8TE82 1336 aa7.94□□□□□ -1.14
LRRC49-226ENST00000560980 SASH1O94885 1247 aa7.94□□□□□ -1.14
LRRC49-226ENST00000560980 GSPT1P15170 499 aaKnown RBP7.94□□□□□ -1.14
LRRC49-226ENST00000560980 OS9Q13438 667 aaPredicted RBP7.94□□□□□ -1.14
LRRC49-226ENST00000560980 RHBDD1Q8TEB9 315 aa7.94□□□□□ -1.14
LRRC49-226ENST00000560980 VTI1AQ96AJ9 217 aa7.94□□□□□ -1.14
LRRC49-226ENST00000560980 NIFKQ9BYG3 293 aaKnown RBP7.94□□□□□ -1.14
LRRC49-226ENST00000560980 GRIP2Q9C0E4 1043 aa7.94□□□□□ -1.14
LRRC49-226ENST00000560980 CXXC1Q9P0U4 656 aaPredicted RBP7.94□□□□□ -1.14
LRRC49-226ENST00000560980 RGS17Q9UGC6 210 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms