RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SLURP2P0DP57 97 aa23■■□□□ 1.27
TPM1-226ENST00000560959 SPP2Q13103 211 aa23■■□□□ 1.27
TPM1-226ENST00000560959 SH3D19Q5HYK7 790 aa23■■□□□ 1.27
TPM1-226ENST00000560959 FAM9BQ8IZU0 186 aa23■■□□□ 1.27
TPM1-226ENST00000560959 PTPRFP10586 1907 aa23■■□□□ 1.27
TPM1-226ENST00000560959 PHIPQ8WWQ0 1821 aa22.99■■□□□ 1.27
TPM1-226ENST00000560959 ADORA1P30542 326 aa22.99■■□□□ 1.27
TPM1-226ENST00000560959 C7orf61Q8IZ16 206 aa22.99■■□□□ 1.27
TPM1-226ENST00000560959 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.99■■□□□ 1.27
TPM1-226ENST00000560959 MORF4L1Q9UBU8 362 aa22.99■■□□□ 1.27
TPM1-226ENST00000560959 OGDHLQ9ULD0 1010 aa22.99■■□□□ 1.27
TPM1-226ENST00000560959 MYH2Q9UKX2 1941 aa22.99■■□□□ 1.27
TPM1-226ENST00000560959 COL2A1P02458 1487 aaPredicted RBP22.98■■□□□ 1.27
TPM1-226ENST00000560959 DOCK1Q14185 1865 aa22.98■■□□□ 1.27
TPM1-226ENST00000560959 LDHCP07864 332 aa22.98■■□□□ 1.27
TPM1-226ENST00000560959 TIMM10P62072 90 aa22.98■■□□□ 1.27
TPM1-226ENST00000560959 MECOMQ03112 1051 aa22.98■■□□□ 1.27
TPM1-226ENST00000560959 ERICH6Q7L0X2 663 aa22.98■■□□□ 1.27
TPM1-226ENST00000560959 CCDC84Q86UT8 332 aaPredicted RBP22.98■■□□□ 1.27
TPM1-226ENST00000560959 DEFB123Q8N688 67 aa22.98■■□□□ 1.27
TPM1-226ENST00000560959 ASCC2Q9H1I8 757 aaPredicted RBP22.98■■□□□ 1.27
TPM1-226ENST00000560959 C11orf49Q9H6J7 331 aa22.98■■□□□ 1.27
TPM1-226ENST00000560959 AKAP2Q9Y2D5 859 aa22.98■■□□□ 1.27
TPM1-226ENST00000560959 STXBP5LQ9Y2K9 1186 aa22.98■■□□□ 1.27
TPM1-226ENST00000560959 DOCK3Q8IZD9 2030 aa22.98■■□□□ 1.27
TPM1-226ENST00000560959 USP17L5A8MUK1 530 aa22.97■■□□□ 1.27
TPM1-226ENST00000560959 CAP2P40123 477 aa22.97■■□□□ 1.27
TPM1-226ENST00000560959 MAP3K21Q5TCX8 1036 aa22.97■■□□□ 1.27
TPM1-226ENST00000560959 XRCC5P13010 732 aaKnown RBP22.96■■□□□ 1.27
TPM1-226ENST00000560959 HMGCS2P54868 508 aa22.96■■□□□ 1.27
TPM1-226ENST00000560959 GSTO1P78417 241 aa22.96■■□□□ 1.27
TPM1-226ENST00000560959 MVPQ14764 893 aaKnown RBP22.96■■□□□ 1.27
TPM1-226ENST00000560959 TDHQ8IZJ6 230 aa22.96■■□□□ 1.27
TPM1-226ENST00000560959 AS3MTQ9HBK9 375 aa22.96■■□□□ 1.27
TPM1-226ENST00000560959 HERC5Q9UII4 1024 aaKnown RBP22.96■■□□□ 1.27
TPM1-226ENST00000560959 ZMYND8Q9ULU4 1186 aaPredicted RBP22.96■■□□□ 1.27
TPM1-226ENST00000560959 PA2G4Q9UQ80 394 aaKnown RBP22.96■■□□□ 1.27
TPM1-226ENST00000560959 HOXA7P31268 230 aaPredicted RBP22.95■■□□□ 1.26
TPM1-226ENST00000560959 TRMT44Q8IYL2 757 aaKnown RBP22.95■■□□□ 1.26
TPM1-226ENST00000560959 ZNF384Q8TF68 577 aa22.95■■□□□ 1.26
TPM1-226ENST00000560959 WDR18Q9BV38 432 aa22.95■■□□□ 1.26
TPM1-226ENST00000560959 A0A1B0GUL7 405 aa22.94■■□□□ 1.26
TPM1-226ENST00000560959 MAGEA10P43363 369 aaPredicted RBP22.94■■□□□ 1.26
TPM1-226ENST00000560959 TRIM32Q13049 653 aa22.94■■□□□ 1.26
TPM1-226ENST00000560959 XAGE2Q96GT9 111 aa22.94■■□□□ 1.26
TPM1-226ENST00000560959 MTMR10Q9NXD2 777 aa22.94■■□□□ 1.26
TPM1-226ENST00000560959 ALPK3Q96L96 1907 aa22.93■■□□□ 1.26
TPM1-226ENST00000560959 SLFN5Q08AF3 891 aa22.93■■□□□ 1.26
TPM1-226ENST00000560959 SOCS4Q8WXH5 440 aa22.93■■□□□ 1.26
TPM1-226ENST00000560959 TRIB2Q92519 343 aa22.93■■□□□ 1.26
TPM1-226ENST00000560959 NSUN4Q96CB9 384 aaKnown RBP22.93■■□□□ 1.26
TPM1-226ENST00000560959 FAM196BA6NMK8 535 aa22.92■■□□□ 1.26
TPM1-226ENST00000560959 NUDT12Q9BQG2 462 aa22.92■■□□□ 1.26
TPM1-226ENST00000560959 DHX36Q9H2U1 1008 aaKnown RBP22.92■■□□□ 1.26
TPM1-226ENST00000560959 SMC4Q9NTJ3 1288 aa22.92■■□□□ 1.26
TPM1-226ENST00000560959 PI4KBQ9UBF8 816 aa22.92■■□□□ 1.26
TPM1-226ENST00000560959 C19orf81C9J6K1 198 aa22.91■■□□□ 1.26
TPM1-226ENST00000560959 SYN1P17600 705 aa22.91■■□□□ 1.26
TPM1-226ENST00000560959 BACE1P56817 501 aa22.91■■□□□ 1.26
TPM1-226ENST00000560959 RRP1BQ14684 758 aaKnown RBP22.91■■□□□ 1.26
TPM1-226ENST00000560959 GPRC5AQ8NFJ5 357 aa22.91■■□□□ 1.26
TPM1-226ENST00000560959 UBE2OQ9C0C9 1292 aaKnown RBP22.91■■□□□ 1.26
TPM1-226ENST00000560959 GINM1Q9NU53 330 aa22.91■■□□□ 1.26
TPM1-226ENST00000560959 HMG20BQ9P0W2 317 aa22.91■■□□□ 1.26
TPM1-226ENST00000560959 LOC285556D6RIA3 1793 aa22.91■■□□□ 1.26
TPM1-226ENST00000560959 ASNSP08243 561 aa22.9■■□□□ 1.26
TPM1-226ENST00000560959 COL6A1P12109 1028 aa22.9■■□□□ 1.26
TPM1-226ENST00000560959 CYP2B6P20813 491 aa22.9■■□□□ 1.26
TPM1-226ENST00000560959 IRX3P78415 501 aaPredicted RBP22.9■■□□□ 1.26
TPM1-226ENST00000560959 SPATA5Q8NB90 893 aa22.9■■□□□ 1.26
TPM1-226ENST00000560959 API5Q9BZZ5 524 aaKnown RBP22.9■■□□□ 1.26
TPM1-226ENST00000560959 PFASO15067 1338 aa22.89■■□□□ 1.26
TPM1-226ENST00000560959 CT47B1P0C2W7 299 aaPredicted RBP22.89■■□□□ 1.25
TPM1-226ENST00000560959 PRKAR2AP13861 404 aaKnown RBP22.89■■□□□ 1.25
TPM1-226ENST00000560959 MAPK4P31152 587 aa22.89■■□□□ 1.25
TPM1-226ENST00000560959 TFCP2Q12800 502 aa22.89■■□□□ 1.25
TPM1-226ENST00000560959 Q7L0L9 218 aa22.89■■□□□ 1.25
TPM1-226ENST00000560959 METTL16Q86W50 562 aaKnown RBP22.89■■□□□ 1.25
TPM1-226ENST00000560959 GTF3C2Q8WUA4 911 aaPredicted RBP22.89■■□□□ 1.25
TPM1-226ENST00000560959 P2RX7Q99572 595 aaKnown RBP22.89■■□□□ 1.25
TPM1-226ENST00000560959 TMOD4Q9NZQ9 345 aa22.89■■□□□ 1.25
TPM1-226ENST00000560959 CUL9Q8IWT3 2517 aa22.89■■□□□ 1.25
TPM1-226ENST00000560959 HERVK_113P62684 666 aa22.88■■□□□ 1.25
TPM1-226ENST00000560959 MTX1Q13505 466 aa22.88■■□□□ 1.25
TPM1-226ENST00000560959 USP6NLQ92738 828 aa22.88■■□□□ 1.25
TPM1-226ENST00000560959 ARID4AP29374 1257 aaPredicted RBP22.87■■□□□ 1.25
TPM1-226ENST00000560959 MTMR2Q13614 643 aa22.87■■□□□ 1.25
TPM1-226ENST00000560959 PDE3AQ14432 1141 aa22.87■■□□□ 1.25
TPM1-226ENST00000560959 LHX8Q68G74 356 aa22.87■■□□□ 1.25
TPM1-226ENST00000560959 FOXP4Q8IVH2 680 aaPredicted RBP22.87■■□□□ 1.25
TPM1-226ENST00000560959 TEX11Q8IYF3 940 aa22.87■■□□□ 1.25
TPM1-226ENST00000560959 NOB1Q9ULX3 412 aaKnown RBP22.87■■□□□ 1.25
TPM1-226ENST00000560959 IGSF3O75054 1194 aa22.86■■□□□ 1.25
TPM1-226ENST00000560959 ZKSCAN1P17029 563 aaPredicted RBP22.86■■□□□ 1.25
TPM1-226ENST00000560959 CACNB2Q08289 660 aaPredicted RBP22.86■■□□□ 1.25
TPM1-226ENST00000560959 FAM109BQ6ICB4 259 aaPredicted RBP22.86■■□□□ 1.25
TPM1-226ENST00000560959 NEUROD6Q96NK8 337 aa22.86■■□□□ 1.25
TPM1-226ENST00000560959 MEIS3Q99687 375 aa22.86■■□□□ 1.25
TPM1-226ENST00000560959 TXNRD2Q9NNW7 524 aa22.86■■□□□ 1.25
TPM1-226ENST00000560959 RAI14Q9P0K7 980 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms