RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 NPHP1O15259 732 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 GPR37O15354 613 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 SPINT1O43278 529 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 HYAL3O43820 417 aaPredicted RBP6.74□□□□□ -1.33
ZEB1-220ENST00000560909 PDE8BO95263 885 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 DPEP1P16444 411 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 GRM5P41594 1212 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 UBE4AQ14139 1066 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 NKAPLQ5M9Q1 402 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 CC2D2BQ6DHV5 1058 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 CHD1LQ86WJ1 897 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 EAF2Q96CJ1 260 aaPredicted RBP6.74□□□□□ -1.33
ZEB1-220ENST00000560909 CCDC85AQ96PX6 553 aaPredicted RBP6.74□□□□□ -1.33
ZEB1-220ENST00000560909 RTFDC1Q9BY42 306 aaPredicted RBP6.74□□□□□ -1.33
ZEB1-220ENST00000560909 LRRCC1Q9C099 1032 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 ANKRD2Q9GZV1 360 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 CEP126Q9P2H0 1117 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 CHMP3Q9Y3E7 222 aa6.74□□□□□ -1.33
ZEB1-220ENST00000560909 A0A0G2JLW4 131 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 SHISA8B8ZZ34 492 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 CHRNA5P30532 468 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 GATA4P43694 442 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 CHRNDQ07001 517 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 TFCP2Q12800 502 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 TNNI3KQ59H18 835 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 TAF7LQ5H9L4 462 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 ANKRD45Q5TZF3 282 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 GPIHBP1Q8IV16 184 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 TTLL6Q8N841 843 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 ZNF512BQ96KM6 892 aaPredicted RBP6.73□□□□□ -1.33
ZEB1-220ENST00000560909 MPHOSPH8Q99549 860 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 SIL1Q9H173 461 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 CNNM1Q9NRU3 951 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 AKAP2Q9Y2D5 859 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 LEMD3Q9Y2U8 911 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 FPGT-TNNI3KV9GXZ4 949 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 MYH3P11055 1940 aa6.73□□□□□ -1.33
ZEB1-220ENST00000560909 DYRK3O43781 588 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 PUM3Q15397 648 aaKnown RBP6.72□□□□□ -1.33
ZEB1-220ENST00000560909 METTL24Q5JXM2 366 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 PRPF40BQ6NWY9 871 aaKnown RBP6.72□□□□□ -1.33
ZEB1-220ENST00000560909 FBXO33Q7Z6M2 555 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 PLEKHM2Q8IWE5 1019 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 C16orf71Q8IYS4 520 aaPredicted RBP6.72□□□□□ -1.33
ZEB1-220ENST00000560909 CLASRPQ8N2M8 674 aaKnown RBP6.72□□□□□ -1.33
ZEB1-220ENST00000560909 LPIN2Q92539 896 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 SYT17Q9BSW7 474 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 PIM2Q9P1W9 311 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 DBNLQ9UJU6 430 aaKnown RBP6.72□□□□□ -1.33
ZEB1-220ENST00000560909 KIAA1551Q9HCM1 1747 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 ZNF804BA4D1E1 1349 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 XDHP47989 1333 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 AOX1Q06278 1338 aa6.72□□□□□ -1.33
ZEB1-220ENST00000560909 GOLGB1Q14789 3259 aaKnown RBP6.72□□□□□ -1.33
ZEB1-220ENST00000560909 COL11A2P13942 1736 aaPredicted RBP6.71□□□□□ -1.34
ZEB1-220ENST00000560909 ZNF609O15014 1411 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 A0A1B0GUL7 405 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 SMARCA5O60264 1052 aaPredicted RBP6.71□□□□□ -1.34
ZEB1-220ENST00000560909 ATP2B4P23634 1241 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 PDE1AP54750 535 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 TIMM10P62072 90 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 GPSM2P81274 684 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 OS9Q13438 667 aaPredicted RBP6.71□□□□□ -1.34
ZEB1-220ENST00000560909 ATP2B3Q16720 1220 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 PRSS36Q5K4E3 855 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 SOGA3Q5TF21 947 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 TICAM2Q86XR7 235 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 TBC1D16Q8TBP0 767 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 OTUD7AQ8TE49 926 aaPredicted RBP6.71□□□□□ -1.34
ZEB1-220ENST00000560909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.71□□□□□ -1.34
ZEB1-220ENST00000560909 SYMPKQ92797 1274 aaKnown RBP6.71□□□□□ -1.34
ZEB1-220ENST00000560909 ZNF622Q969S3 477 aaKnown RBP eCLIP6.71□□□□□ -1.34
ZEB1-220ENST00000560909 PSMD1Q99460 953 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 FHDC1Q9C0D6 1143 aaPredicted RBP6.71□□□□□ -1.34
ZEB1-220ENST00000560909 LNPKQ9C0E8 428 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 VPS33BQ9H267 617 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 IL1RAPL2Q9NP60 686 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 POLLQ9UGP5 575 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 TTC41PQ6P2S7 1318 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 LTBP3Q9NS15 1303 aa6.71□□□□□ -1.34
ZEB1-220ENST00000560909 LRRC37AA6NMS7 1700 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 WTIPA6NIX2 430 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-220ENST00000560909 TAF5LO75529 589 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 ATP5JP18859 108 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 DALRD3Q5D0E6 543 aaKnown RBP6.7□□□□□ -1.34
ZEB1-220ENST00000560909 SLC51AQ86UW1 340 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 AACSQ86V21 672 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 RTKN2Q8IZC4 609 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 NLGN2Q8NFZ4 835 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 HELBQ8NG08 1087 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-220ENST00000560909 PI4K2BQ8TCG2 481 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 XAGE2Q96GT9 111 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 FAM84BQ96KN1 310 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-220ENST00000560909 DBNDD2Q9BQY9 259 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 ECHDC1Q9NTX5 307 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 GGA1Q9UJY5 639 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 PDS5AQ29RF7 1337 aaKnown RBP6.7□□□□□ -1.34
ZEB1-220ENST00000560909 LTBP1Q14766 1721 aa6.7□□□□□ -1.34
ZEB1-220ENST00000560909 MED23Q9ULK4 1368 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 DLEC1Q9Y238 1755 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms