RNA–Protein interactions for RNA: ENST00000560865.1

AC108449.2-201, humanhuman

TSL 3 BASIC

Gene AC108449.2, Length 552 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC108449.2-201ENST00000560865 SHROOM2Q13796 1616 aa8.72□□□□□ -1.01
AC108449.2-201ENST00000560865 TTC37Q6PGP7 1564 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 A0A096LPE4 126 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 A0A1W2PPZ6 126 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 SCAMP3O14828 347 aaKnown RBP8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 NEFMP07197 916 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 NID1P14543 1247 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 ATP2B1P20020 1258 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 ITPKAP23677 461 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 GTF2F1P35269 517 aaKnown RBP eCLIP8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 GRIA4P48058 902 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 FCGRTP55899 365 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 MRPL58Q14197 206 aaKnown RBP8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 BECN1Q14457 450 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 MSL1Q68DK7 614 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 DTHD1Q6ZMT9 781 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 FAM161BQ96MY7 647 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 RNF19AQ9NV58 838 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 SOX13Q9UN79 622 aa8.71□□□□□ -1.02
AC108449.2-201ENST00000560865 FAM181BA6NEQ2 426 aa8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 GNB5O14775 395 aa8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 CT47B1P0C2W7 299 aaPredicted RBP8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 SPTY2D1Q68D10 685 aaPredicted RBP8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 SMC5Q8IY18 1101 aa8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 IL22RA1Q8N6P7 574 aa8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 CRELD1Q96HD1 420 aa8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 PPM1HQ9ULR3 514 aa8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 CEP152O94986 1710 aa8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 SPHKAPQ2M3C7 1700 aa8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 NKTRP30414 1462 aaKnown RBP8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 MYOM2P54296 1465 aa8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 SYCP2Q9BX26 1530 aa8.7□□□□□ -1.02
AC108449.2-201ENST00000560865 MADDQ8WXG6 1647 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 SPDYE3A6NKU9 549 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 METTL12A8MUP2 240 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 HMGB1P1B2RPK0 211 aaPredicted RBP8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 USP17L7P0C7H9 530 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 PPP2R1AP30153 589 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 SLFN5Q08AF3 891 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 HSP90AB2PQ58FF8 381 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 RPS26P11Q5JNZ5 115 aaPredicted RBP8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 DUSP27Q5VZP5 1158 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 FAM117BQ6P1L5 589 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 APBB1IPQ7Z5R6 666 aaPredicted RBP8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 PMFBP1Q8TBY8 1022 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 CLEC4MQ9H2X3 399 aaPredicted RBP8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 SRA1Q9HD15 236 aaKnown RBP8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 TBX22Q9Y458 520 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 TET3O43151 1660 aa8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 KDM5AP29375 1690 aaKnown RBP8.69□□□□□ -1.02
AC108449.2-201ENST00000560865 H3BRJ5 948 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 EPHA1P21709 976 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 BAG6P46379 1132 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 SNRPNP63162 240 aaKnown RBP8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 COL9A3Q14050 684 aaPredicted RBP8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 SPRED3Q2MJR0 410 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 MAP4K3Q8IVH8 894 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 DTWD1Q8N5C7 304 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 C3orf58Q8NDZ4 430 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 ZNF576Q9H609 170 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 ADAMTS8Q9UP79 889 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 POLR3AO14802 1390 aaPredicted RBP8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 DISP3Q9P2K9 1392 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 DEPDC5O75140 1603 aa8.68□□□□□ -1.02
AC108449.2-201ENST00000560865 RAD51AP2Q09MP3 1159 aa8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 ADAMTSL4Q6UY14 1074 aa8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 LINC00114Q6XXX2 140 aa8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 BEND7Q8N7W2 519 aaPredicted RBP8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 SLC43A3Q8NBI5 491 aa8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 ANKRD24Q8TF21 1146 aa8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 SCARF2Q96GP6 870 aaPredicted RBP8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 CRBNQ96SW2 442 aa8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 PIF1Q9H611 641 aa8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 UPF2Q9HAU5 1272 aaKnown RBP8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 SH2B1Q9NRF2 756 aaPredicted RBP8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 NOP53Q9NZM5 478 aaKnown RBP8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 CHPF2Q9P2E5 772 aa8.67□□□□□ -1.02
AC108449.2-201ENST00000560865 ABCC1P33527 1531 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 CCDC194A0A1B0GVG4 234 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 PCDH1Q08174 1060 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 IKBKEQ14164 716 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 VN1R5Q7Z5H4 357 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 WNT8BQ93098 351 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 TRIM11Q96F44 468 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 TINF2Q9BSI4 451 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 BRINP2Q9C0B6 783 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 UBA5Q9GZZ9 404 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 TERF2IPQ9NYB0 399 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 AKAP2Q9Y2D5 859 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 FAN1Q9Y2M0 1017 aa8.66□□□□□ -1.02
AC108449.2-201ENST00000560865 NSD2O96028 1365 aa8.65□□□□□ -1.02
AC108449.2-201ENST00000560865 RAC1P63000 192 aa8.65□□□□□ -1.02
AC108449.2-201ENST00000560865 PIP4K2BP78356 416 aa8.65□□□□□ -1.02
AC108449.2-201ENST00000560865 TCEAL1Q15170 157 aa8.65□□□□□ -1.02
AC108449.2-201ENST00000560865 RGL3Q3MIN7 710 aa8.65□□□□□ -1.02
AC108449.2-201ENST00000560865 CC2D1BQ5T0F9 858 aaKnown RBP8.65□□□□□ -1.02
AC108449.2-201ENST00000560865 TRAPPC3LQ5T215 181 aa8.65□□□□□ -1.02
AC108449.2-201ENST00000560865 WDR63Q8IWG1 891 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms