RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 USP5P45974 858 aa18.45■□□□□ 0.54
SNRPA1-213ENST00000560856 INHBEP58166 350 aa18.45■□□□□ 0.54
SNRPA1-213ENST00000560856 ZSCAN25Q6NSZ9 544 aa18.45■□□□□ 0.54
SNRPA1-213ENST00000560856 FOXP4Q8IVH2 680 aaPredicted RBP18.45■□□□□ 0.54
SNRPA1-213ENST00000560856 OTUD5Q96G74 571 aa18.45■□□□□ 0.54
SNRPA1-213ENST00000560856 PTPN18Q99952 460 aa18.45■□□□□ 0.54
SNRPA1-213ENST00000560856 ARMT1Q9H993 441 aa18.45■□□□□ 0.54
SNRPA1-213ENST00000560856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNRPA1-213ENST00000560856 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
SNRPA1-213ENST00000560856 IGF2BP3O00425 579 aaKnown RBP eCLIP18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 IRF6O14896 467 aa18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 RNF113AO15541 343 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 PRKAB2O43741 272 aa18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 CTNND1O60716 968 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 MBD4O95243 580 aa18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 PPATQ06203 517 aa18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 SREBF2Q12772 1141 aa18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 PPIL2Q13356 520 aa18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 PLEKHM2Q8IWE5 1019 aa18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 SCYL3Q8IZE3 742 aa18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 OSBP2Q969R2 916 aa18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 CRNKL1Q9BZJ0 848 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 HERC5Q9UII4 1024 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-213ENST00000560856 COL13A1Q5TAT6 717 aaPredicted RBP18.43■□□□□ 0.54
SNRPA1-213ENST00000560856 IFNL1Q8IU54 200 aa18.43■□□□□ 0.54
SNRPA1-213ENST00000560856 SDR42E1Q8WUS8 393 aa18.43■□□□□ 0.54
SNRPA1-213ENST00000560856 BRI3BPQ8WY22 251 aa18.43■□□□□ 0.54
SNRPA1-213ENST00000560856 OSBPL3Q9H4L5 887 aa18.43■□□□□ 0.54
SNRPA1-213ENST00000560856 DCP1AQ9NPI6 582 aaPredicted RBP18.43■□□□□ 0.54
SNRPA1-213ENST00000560856 KCNH4Q9UQ05 1017 aa18.43■□□□□ 0.54
SNRPA1-213ENST00000560856 ZFYP08048 801 aaPredicted RBP18.42■□□□□ 0.54
SNRPA1-213ENST00000560856 PTPRAP18433 802 aa18.42■□□□□ 0.54
SNRPA1-213ENST00000560856 JAG1P78504 1218 aa18.42■□□□□ 0.54
SNRPA1-213ENST00000560856 EVX2Q03828 476 aa18.42■□□□□ 0.54
SNRPA1-213ENST00000560856 APPBP2Q92624 585 aa18.42■□□□□ 0.54
SNRPA1-213ENST00000560856 STRBPQ96SI9 672 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-213ENST00000560856 CFHR5Q9BXR6 569 aa18.42■□□□□ 0.54
SNRPA1-213ENST00000560856 R3HDMLQ9H3Y0 253 aa18.42■□□□□ 0.54
SNRPA1-213ENST00000560856 MYH1P12882 1939 aa18.42■□□□□ 0.54
SNRPA1-213ENST00000560856 DDX60LQ5H9U9 1706 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-213ENST00000560856 PDE4AP27815 886 aa18.41■□□□□ 0.54
SNRPA1-213ENST00000560856 CAP2P40123 477 aa18.41■□□□□ 0.54
SNRPA1-213ENST00000560856 PLCD1P51178 756 aa18.41■□□□□ 0.54
SNRPA1-213ENST00000560856 GTF2A2P52657 109 aa18.41■□□□□ 0.54
SNRPA1-213ENST00000560856 SLC4A8Q2Y0W8 1093 aa18.41■□□□□ 0.54
SNRPA1-213ENST00000560856 EHD4Q9H223 541 aa18.41■□□□□ 0.54
SNRPA1-213ENST00000560856 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.41■□□□□ 0.54
SNRPA1-213ENST00000560856 GABPAQ06546 454 aa18.4■□□□□ 0.54
SNRPA1-213ENST00000560856 MOGSQ13724 837 aa18.4■□□□□ 0.54
SNRPA1-213ENST00000560856 ZMYM1Q5SVZ6 1142 aa18.4■□□□□ 0.54
SNRPA1-213ENST00000560856 ATP8A2Q9NTI2 1148 aa18.4■□□□□ 0.54
SNRPA1-213ENST00000560856 AFG3L2Q9Y4W6 797 aa18.4■□□□□ 0.54
SNRPA1-213ENST00000560856 CCL15-CCL14A0A0B4J2E2 113 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 M0R2C6 588 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 HLA-DOAP06340 250 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 SNAPC2Q13487 334 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 CCL15Q16663 113 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 TATDN1Q6P1N9 297 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 TTC6Q86TZ1 520 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 CCDC84Q86UT8 332 aaPredicted RBP18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 EVI5LQ96CN4 794 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 SEC62Q99442 399 aaKnown RBP18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 FSD1Q9BTV5 496 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 PICK1Q9NRD5 415 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 MCM9Q9NXL9 1143 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 ZHX2Q9Y6X8 837 aa18.39■□□□□ 0.53
SNRPA1-213ENST00000560856 DOCK1Q14185 1865 aa18.38■□□□□ 0.53
SNRPA1-213ENST00000560856 SMIM22K7EJ46 135 aa18.38■□□□□ 0.53
SNRPA1-213ENST00000560856 CXCL11O14625 94 aa18.38■□□□□ 0.53
SNRPA1-213ENST00000560856 TBC1D8O95759 1140 aa18.38■□□□□ 0.53
SNRPA1-213ENST00000560856 CYP2D6P10635 497 aa18.38■□□□□ 0.53
SNRPA1-213ENST00000560856 SHROOM1Q2M3G4 852 aaPredicted RBP18.38■□□□□ 0.53
SNRPA1-213ENST00000560856 FAM43AQ8N2R8 423 aa18.38■□□□□ 0.53
SNRPA1-213ENST00000560856 CRACR2BQ8N4Y2 399 aaPredicted RBP18.38■□□□□ 0.53
SNRPA1-213ENST00000560856 SERPINB13Q9UIV8 391 aa18.38■□□□□ 0.53
SNRPA1-213ENST00000560856 SLC4A4Q9Y6R1 1079 aa18.38■□□□□ 0.53
SNRPA1-213ENST00000560856 PHIPQ8WWQ0 1821 aa18.37■□□□□ 0.53
SNRPA1-213ENST00000560856 CASP8AP2Q9UKL3 1982 aa18.37■□□□□ 0.53
SNRPA1-213ENST00000560856 GSG1L2A8MUP6 293 aa18.37■□□□□ 0.53
SNRPA1-213ENST00000560856 GPAA1O43292 621 aa18.37■□□□□ 0.53
SNRPA1-213ENST00000560856 ALDH1A1P00352 501 aa18.37■□□□□ 0.53
SNRPA1-213ENST00000560856 POLR3DP05423 398 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-213ENST00000560856 CETPP11597 493 aa18.37■□□□□ 0.53
SNRPA1-213ENST00000560856 SHMT1P34896 483 aa18.37■□□□□ 0.53
SNRPA1-213ENST00000560856 LRRFIP1Q32MZ4 808 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-213ENST00000560856 NAV1Q8NEY1 1877 aa18.37■□□□□ 0.53
SNRPA1-213ENST00000560856 BTBD19C9JJ37 291 aa18.36■□□□□ 0.53
SNRPA1-213ENST00000560856 NOM1Q5C9Z4 860 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-213ENST00000560856 C12orf60Q5U649 245 aa18.36■□□□□ 0.53
SNRPA1-213ENST00000560856 TICAM2Q86XR7 235 aa18.36■□□□□ 0.53
SNRPA1-213ENST00000560856 BAZ2AQ9UIF9 1905 aaKnown RBP18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 CYP2D7A0A087X1C5 515 aa18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 A0A0G2JLL6 359 aaPredicted RBP18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 USP17L12C9JPN9 530 aa18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 USP17L21D6R901 530 aa18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 OTUD7BQ6GQQ9 843 aa18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 GPAT2Q6NUI2 795 aa18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 GIMAP6Q6P9H5 292 aa18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 CTR9Q6PD62 1173 aa18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 PRRT2Q7Z6L0 340 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms