RNA–Protein interactions for RNA: ENST00000560828.5

CPNE6-217, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-217ENST00000560828 PRPF38BQ5VTL8 546 aaKnown RBP20.57■□□□□ 0.88
CPNE6-217ENST00000560828 CERS3Q8IU89 383 aa20.57■□□□□ 0.88
CPNE6-217ENST00000560828 ARHGAP39Q9C0H5 1083 aa20.57■□□□□ 0.88
CPNE6-217ENST00000560828 FLT1P17948 1338 aa20.56■□□□□ 0.88
CPNE6-217ENST00000560828 TRIM75PA6NK02 468 aa20.56■□□□□ 0.88
CPNE6-217ENST00000560828 IDH1O75874 414 aaKnown RBP20.56■□□□□ 0.88
CPNE6-217ENST00000560828 PRMT2P55345 433 aa20.56■□□□□ 0.88
CPNE6-217ENST00000560828 KIF1BPQ96EK5 621 aa20.56■□□□□ 0.88
CPNE6-217ENST00000560828 TBC1D2Q9BYX2 928 aa20.56■□□□□ 0.88
CPNE6-217ENST00000560828 PTCH2Q9Y6C5 1203 aa20.56■□□□□ 0.88
CPNE6-217ENST00000560828 CYP2C8P10632 490 aa20.55■□□□□ 0.88
CPNE6-217ENST00000560828 CYP7A1P22680 504 aa20.55■□□□□ 0.88
CPNE6-217ENST00000560828 CAP2P40123 477 aa20.55■□□□□ 0.88
CPNE6-217ENST00000560828 SLC9C1Q4G0N8 1177 aa20.55■□□□□ 0.88
CPNE6-217ENST00000560828 GADL1Q6ZQY3 521 aa20.55■□□□□ 0.88
CPNE6-217ENST00000560828 MAPKAPK5Q8IW41 473 aa20.55■□□□□ 0.88
CPNE6-217ENST00000560828 SIRT2Q8IXJ6 389 aa20.55■□□□□ 0.88
CPNE6-217ENST00000560828 CLASRPQ8N2M8 674 aaKnown RBP20.55■□□□□ 0.88
CPNE6-217ENST00000560828 TGFBRAP1Q8WUH2 860 aa20.55■□□□□ 0.88
CPNE6-217ENST00000560828 IL1RAPL2Q9NP60 686 aa20.55■□□□□ 0.88
CPNE6-217ENST00000560828 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.55■□□□□ 0.88
CPNE6-217ENST00000560828 DOCK1Q14185 1865 aa20.54■□□□□ 0.88
CPNE6-217ENST00000560828 MAP3K12Q12852 859 aa20.54■□□□□ 0.88
CPNE6-217ENST00000560828 PDE3AQ14432 1141 aa20.54■□□□□ 0.88
CPNE6-217ENST00000560828 NBPF11Q86T75 865 aa20.54■□□□□ 0.88
CPNE6-217ENST00000560828 METTL16Q86W50 562 aaKnown RBP20.54■□□□□ 0.88
CPNE6-217ENST00000560828 ZNF333Q96JL9 665 aa20.54■□□□□ 0.88
CPNE6-217ENST00000560828 RAB11FIP3O75154 756 aa20.53■□□□□ 0.88
CPNE6-217ENST00000560828 BCRP11274 1271 aa20.53■□□□□ 0.88
CPNE6-217ENST00000560828 CCDC84Q86UT8 332 aaPredicted RBP20.53■□□□□ 0.88
CPNE6-217ENST00000560828 FOXP4Q8IVH2 680 aaPredicted RBP20.53■□□□□ 0.88
CPNE6-217ENST00000560828 MAGEB6Q8N7X4 407 aa20.53■□□□□ 0.88
CPNE6-217ENST00000560828 ANTXR1Q9H6X2 564 aa20.53■□□□□ 0.88
CPNE6-217ENST00000560828 AGTPBP1Q9UPW5 1226 aa20.53■□□□□ 0.88
CPNE6-217ENST00000560828 NDUFB9Q9Y6M9 179 aa20.53■□□□□ 0.88
CPNE6-217ENST00000560828 CTGFP29279 349 aa20.52■□□□□ 0.88
CPNE6-217ENST00000560828 PSMC4P43686 418 aa20.52■□□□□ 0.88
CPNE6-217ENST00000560828 DYNLL1P63167 89 aaKnown RBP20.52■□□□□ 0.88
CPNE6-217ENST00000560828 RRP1BQ14684 758 aaKnown RBP20.52■□□□□ 0.88
CPNE6-217ENST00000560828 TTF1Q15361 905 aaPredicted RBP20.52■□□□□ 0.88
CPNE6-217ENST00000560828 PROCA1Q8NCQ7 364 aaPredicted RBP20.52■□□□□ 0.88
CPNE6-217ENST00000560828 ZNF280CQ8ND82 737 aa20.52■□□□□ 0.88
CPNE6-217ENST00000560828 TRIM47Q96LD4 638 aa20.52■□□□□ 0.88
CPNE6-217ENST00000560828 PALD1Q9ULE6 856 aa20.52■□□□□ 0.88
CPNE6-217ENST00000560828 CENPFP49454 3210 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 POTEFA5A3E0 1075 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 USP17L5A8MUK1 530 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 APBB1O00213 710 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 HLA-DOAP06340 250 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 IFIT2P09913 472 aaKnown RBP20.51■□□□□ 0.87
CPNE6-217ENST00000560828 HOXD10P28358 340 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 SPP2Q13103 211 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 CRACR2BQ8N4Y2 399 aaPredicted RBP20.51■□□□□ 0.87
CPNE6-217ENST00000560828 MIGA1Q8NAN2 632 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.51■□□□□ 0.87
CPNE6-217ENST00000560828 TRIM34Q9BYJ4 488 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 DNAJC18Q9H819 358 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 AS3MTQ9HBK9 375 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 SRRDQ9UH36 339 aa20.51■□□□□ 0.87
CPNE6-217ENST00000560828 FMNL1O95466 1100 aaPredicted RBP20.5■□□□□ 0.87
CPNE6-217ENST00000560828 ASNSP08243 561 aa20.5■□□□□ 0.87
CPNE6-217ENST00000560828 SMCR8Q8TEV9 937 aaPredicted RBP20.5■□□□□ 0.87
CPNE6-217ENST00000560828 TMEM106CQ9BVX2 250 aa20.5■□□□□ 0.87
CPNE6-217ENST00000560828 PNMA3Q9UL41 463 aa20.5■□□□□ 0.87
CPNE6-217ENST00000560828 KIAA0100Q14667 2235 aaKnown RBP20.5■□□□□ 0.87
CPNE6-217ENST00000560828 OSBPP22059 807 aa20.49■□□□□ 0.87
CPNE6-217ENST00000560828 FCGRTP55899 365 aa20.49■□□□□ 0.87
CPNE6-217ENST00000560828 TREML2Q5T2D2 321 aa20.49■□□□□ 0.87
CPNE6-217ENST00000560828 C20orf194Q5TEA3 1177 aa20.49■□□□□ 0.87
CPNE6-217ENST00000560828 GINM1Q9NU53 330 aa20.49■□□□□ 0.87
CPNE6-217ENST00000560828 SAP30BPQ9UHR5 308 aaKnown RBP20.49■□□□□ 0.87
CPNE6-217ENST00000560828 USP5P45974 858 aa20.48■□□□□ 0.87
CPNE6-217ENST00000560828 SH3D19Q5HYK7 790 aa20.48■□□□□ 0.87
CPNE6-217ENST00000560828 SH3TC2Q8TF17 1288 aa20.48■□□□□ 0.87
CPNE6-217ENST00000560828 WDR18Q9BV38 432 aa20.48■□□□□ 0.87
CPNE6-217ENST00000560828 MYPNQ86TC9 1320 aa20.48■□□□□ 0.87
CPNE6-217ENST00000560828 PHIPQ8WWQ0 1821 aa20.48■□□□□ 0.87
CPNE6-217ENST00000560828 ECM2O94769 699 aaPredicted RBP20.47■□□□□ 0.87
CPNE6-217ENST00000560828 HMGCS2P54868 508 aa20.47■□□□□ 0.87
CPNE6-217ENST00000560828 PABPC4Q13310 644 aaKnown RBP eCLIP20.47■□□□□ 0.87
CPNE6-217ENST00000560828 RIOK1Q9BRS2 568 aaKnown RBP20.47■□□□□ 0.87
CPNE6-217ENST00000560828 ZSWIM8A7E2V4 1837 aa20.46■□□□□ 0.87
CPNE6-217ENST00000560828 SIPA1L1O43166 1804 aa20.46■□□□□ 0.87
CPNE6-217ENST00000560828 SLC9C2Q5TAH2 1124 aa20.46■□□□□ 0.87
CPNE6-217ENST00000560828 RAET1EQ8TD07 263 aa20.46■□□□□ 0.87
CPNE6-217ENST00000560828 DNAJC2Q99543 621 aaKnown RBP20.46■□□□□ 0.87
CPNE6-217ENST00000560828 EHD4Q9H223 541 aa20.46■□□□□ 0.87
CPNE6-217ENST00000560828 MKI67P46013 3256 aaKnown RBP20.45■□□□□ 0.86
CPNE6-217ENST00000560828 GOLIM4O00461 696 aa20.45■□□□□ 0.86
CPNE6-217ENST00000560828 PDE6AP16499 860 aa20.45■□□□□ 0.86
CPNE6-217ENST00000560828 BACE1P56817 501 aa20.45■□□□□ 0.86
CPNE6-217ENST00000560828 JAG1P78504 1218 aa20.45■□□□□ 0.86
CPNE6-217ENST00000560828 PRKCZQ05513 592 aa20.45■□□□□ 0.86
CPNE6-217ENST00000560828 ZBTB21Q9ULJ3 1066 aa20.45■□□□□ 0.86
CPNE6-217ENST00000560828 FOCADQ5VW36 1801 aa20.45■□□□□ 0.86
CPNE6-217ENST00000560828 MAGEB6P1A0A0J9YX57 407 aa20.44■□□□□ 0.86
CPNE6-217ENST00000560828 GDF11O95390 407 aa20.44■□□□□ 0.86
CPNE6-217ENST00000560828 ATP5JP18859 108 aa20.44■□□□□ 0.86
CPNE6-217ENST00000560828 EN2P19622 333 aaPredicted RBP20.44■□□□□ 0.86
CPNE6-217ENST00000560828 GRK4P32298 578 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms