RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 TJAP1Q5JTD0 557 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 ZFPM1Q8IX07 1006 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 FAM122AQ96E09 287 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 SUCLG2Q96I99 432 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 TBC1D2Q9BYX2 928 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 SEMA6BQ9H3T3 888 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 GNL3LQ9NVN8 582 aaKnown RBP11.56□□□□□ -0.56
SMAD3-215ENST00000560424 SPTBN5Q9NRC6 3674 aaKnown RBP11.56□□□□□ -0.56
SMAD3-215ENST00000560424 XRCC5P13010 732 aaKnown RBP11.55□□□□□ -0.56
SMAD3-215ENST00000560424 HMGCS2P54868 508 aa11.55□□□□□ -0.56
SMAD3-215ENST00000560424 CACNB2Q08289 660 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-215ENST00000560424 MAP3K21Q5TCX8 1036 aa11.55□□□□□ -0.56
SMAD3-215ENST00000560424 CCDC84Q86UT8 332 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-215ENST00000560424 SLF2Q8IX21 1173 aa11.55□□□□□ -0.56
SMAD3-215ENST00000560424 ZNF280CQ8ND82 737 aa11.55□□□□□ -0.56
SMAD3-215ENST00000560424 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
SMAD3-215ENST00000560424 ASCC2Q9H1I8 757 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-215ENST00000560424 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMAD3-215ENST00000560424 AS3MTQ9HBK9 375 aa11.55□□□□□ -0.56
SMAD3-215ENST00000560424 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-215ENST00000560424 ATRNL1Q5VV63 1379 aa11.54□□□□□ -0.56
SMAD3-215ENST00000560424 TMEM265A0A087WTH1 108 aa11.54□□□□□ -0.56
SMAD3-215ENST00000560424 CCND3P30281 292 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-215ENST00000560424 RGS2P41220 211 aa11.54□□□□□ -0.56
SMAD3-215ENST00000560424 ATN1P54259 1190 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-215ENST00000560424 DZIP1Q86YF9 867 aaKnown RBP11.54□□□□□ -0.56
SMAD3-215ENST00000560424 ZGPATQ8N5A5 531 aaKnown RBP11.54□□□□□ -0.56
SMAD3-215ENST00000560424 VGLL2Q8N8G2 317 aa11.54□□□□□ -0.56
SMAD3-215ENST00000560424 LPIN2Q92539 896 aa11.54□□□□□ -0.56
SMAD3-215ENST00000560424 BICC1Q9H694 974 aaKnown RBP11.54□□□□□ -0.56
SMAD3-215ENST00000560424 TMOD4Q9NZQ9 345 aa11.54□□□□□ -0.56
SMAD3-215ENST00000560424 PHIPQ8WWQ0 1821 aa11.53□□□□□ -0.56
SMAD3-215ENST00000560424 DDTLA6NHG4 134 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-215ENST00000560424 CNGA1P29973 690 aa11.53□□□□□ -0.56
SMAD3-215ENST00000560424 MAPK4P31152 587 aa11.53□□□□□ -0.56
SMAD3-215ENST00000560424 GPRC5AQ8NFJ5 357 aa11.53□□□□□ -0.56
SMAD3-215ENST00000560424 CDCA7LQ96GN5 454 aa11.53□□□□□ -0.56
SMAD3-215ENST00000560424 OSBPL5Q9H0X9 879 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-215ENST00000560424 PRDM5Q9NQX1 630 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-215ENST00000560424 MORF4L1Q9UBU8 362 aa11.53□□□□□ -0.56
SMAD3-215ENST00000560424 ATP11BQ9Y2G3 1177 aa11.53□□□□□ -0.56
SMAD3-215ENST00000560424 EYSQ5T1H1 3165 aa11.53□□□□□ -0.56
SMAD3-215ENST00000560424 LOC285556D6RIA3 1793 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 MSCO60682 206 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 VAMP4O75379 141 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 NBPF7P0C2Y1 421 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-215ENST00000560424 FGFR2P21802 821 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 PLA2G5P39877 138 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 RTP1P59025 263 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 SMAD3P84022 425 aaKnown RBP11.52□□□□□ -0.57
SMAD3-215ENST00000560424 MAP3K10Q02779 954 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 SHHQ15465 462 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 LHX8Q68G74 356 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 SH3BP5LQ7L8J4 393 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 IL27Q8NEV9 243 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 KLHDC4Q8TBB5 520 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 APBA2Q99767 749 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 DENND2AQ9ULE3 1009 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-215ENST00000560424 FANCIQ9NVI1 1328 aa11.52□□□□□ -0.57
SMAD3-215ENST00000560424 MAST2Q6P0Q8 1798 aa11.51□□□□□ -0.57
SMAD3-215ENST00000560424 USP17L5A8MUK1 530 aa11.51□□□□□ -0.57
SMAD3-215ENST00000560424 TBC1D12O60347 775 aa11.51□□□□□ -0.57
SMAD3-215ENST00000560424 GLRX3O76003 335 aaKnown RBP11.51□□□□□ -0.57
SMAD3-215ENST00000560424 RABL6Q3YEC7 729 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-215ENST00000560424 MFSD14CQ5VZR4 134 aa11.51□□□□□ -0.57
SMAD3-215ENST00000560424 KAZALD1Q96I82 304 aa11.51□□□□□ -0.57
SMAD3-215ENST00000560424 ABCF2Q9UG63 623 aa11.51□□□□□ -0.57
SMAD3-215ENST00000560424 SALL1Q9NSC2 1324 aa11.51□□□□□ -0.57
SMAD3-215ENST00000560424 PLXNB2O15031 1838 aa11.51□□□□□ -0.57
SMAD3-215ENST00000560424 MYH2Q9UKX2 1941 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 CDH23Q9H251 3354 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 FAM196BA6NMK8 535 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 SEMA3EO15041 775 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 CT47B1P0C2W7 299 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-215ENST00000560424 SLURP2P0DP57 97 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 BTDP43251 543 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 EXOSC9Q06265 439 aaKnown RBP11.5□□□□□ -0.57
SMAD3-215ENST00000560424 CCL14Q16627 93 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 C9orf50Q5SZB4 431 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 WDR78Q5VTH9 848 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 ERICH6BQ5W0A0 696 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 GPR142Q7Z601 462 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 PLEKHH3Q7Z736 793 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 GTF3C2Q8WUA4 911 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-215ENST00000560424 PAGR1Q9BTK6 254 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 TTYH1Q9H313 450 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-215ENST00000560424 RAPGEFL1Q9UHV5 662 aa11.5□□□□□ -0.57
SMAD3-215ENST00000560424 KBTBD13C9JR72 458 aa11.49□□□□□ -0.57
SMAD3-215ENST00000560424 EYA2O00167 538 aa11.49□□□□□ -0.57
SMAD3-215ENST00000560424 DNM1LO00429 736 aa11.49□□□□□ -0.57
SMAD3-215ENST00000560424 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-215ENST00000560424 CAP2P40123 477 aa11.49□□□□□ -0.57
SMAD3-215ENST00000560424 HERVK_113P62684 666 aa11.49□□□□□ -0.57
SMAD3-215ENST00000560424 ERVK-9P63128 1117 aa11.49□□□□□ -0.57
SMAD3-215ENST00000560424 ERVK-24P63145 666 aa11.49□□□□□ -0.57
SMAD3-215ENST00000560424 MTMR2Q13614 643 aa11.49□□□□□ -0.57
SMAD3-215ENST00000560424 ATP2B3Q16720 1220 aa11.49□□□□□ -0.57
SMAD3-215ENST00000560424 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
SMAD3-215ENST00000560424 SPTY2D1Q68D10 685 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms