RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 MOGSQ13724 837 aa18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 KIF22Q14807 665 aa18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 TTF1Q15361 905 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 ZSCAN29Q8IWY8 852 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 CRBNQ96SW2 442 aa18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 ADGRA2Q96PE1 1338 aa18.47■□□□□ 0.55
SNRPA1-210ENST00000560383 MAP3K12Q12852 859 aa18.46■□□□□ 0.55
SNRPA1-210ENST00000560383 PICALMQ13492 652 aa18.46■□□□□ 0.55
SNRPA1-210ENST00000560383 PRPF38BQ5VTL8 546 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-210ENST00000560383 C17orf99Q6UX52 265 aa18.46■□□□□ 0.55
SNRPA1-210ENST00000560383 CERS3Q8IU89 383 aa18.46■□□□□ 0.55
SNRPA1-210ENST00000560383 SH3RF3Q8TEJ3 882 aaPredicted RBP18.46■□□□□ 0.55
SNRPA1-210ENST00000560383 NOL10Q9BSC4 688 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-210ENST00000560383 PICK1Q9NRD5 415 aa18.46■□□□□ 0.55
SNRPA1-210ENST00000560383 AATFQ9NY61 560 aaKnown RBP eCLIP18.46■□□□□ 0.55
SNRPA1-210ENST00000560383 FOCADQ5VW36 1801 aa18.46■□□□□ 0.55
SNRPA1-210ENST00000560383 PDHXO00330 501 aa18.45■□□□□ 0.54
SNRPA1-210ENST00000560383 SMARCA5O60264 1052 aaPredicted RBP18.45■□□□□ 0.54
SNRPA1-210ENST00000560383 TBC1D12O60347 775 aa18.45■□□□□ 0.54
SNRPA1-210ENST00000560383 CYP7A1P22680 504 aa18.45■□□□□ 0.54
SNRPA1-210ENST00000560383 PRMT2P55345 433 aa18.45■□□□□ 0.54
SNRPA1-210ENST00000560383 AAMPQ13685 434 aa18.45■□□□□ 0.54
SNRPA1-210ENST00000560383 TEX11Q8IYF3 940 aa18.45■□□□□ 0.54
SNRPA1-210ENST00000560383 OSBPL5Q9H0X9 879 aaPredicted RBP18.45■□□□□ 0.54
SNRPA1-210ENST00000560383 CDK5RAP2Q96SN8 1893 aa18.45■□□□□ 0.54
SNRPA1-210ENST00000560383 ATAD5Q96QE3 1844 aa18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 KIAA0100Q14667 2235 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 A0A0G2JLL6 359 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 CTNND1O60716 968 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 PTPRAP18433 802 aa18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 SLC9C1Q4G0N8 1177 aa18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 PRRT2Q7Z6L0 340 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 NBPF11Q86T75 865 aa18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 MAGEB6Q8N7X4 407 aa18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 ZNF333Q96JL9 665 aa18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 PARK7Q99497 189 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 HAUS7Q99871 368 aa18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 PTCH2Q9Y6C5 1203 aa18.44■□□□□ 0.54
SNRPA1-210ENST00000560383 FASTKD5Q7L8L6 764 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-210ENST00000560383 SLC45A1Q9Y2W3 748 aa18.43■□□□□ 0.54
SNRPA1-210ENST00000560383 AFG3L2Q9Y4W6 797 aa18.43■□□□□ 0.54
SNRPA1-210ENST00000560383 LOC285556D6RIA3 1793 aa18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 MGAMO43451 1857 aa18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 MYO5AQ9Y4I1 1855 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 POTEFA5A3E0 1075 aa18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 GOLIM4O00461 696 aa18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 SLC34A2O95436 690 aa18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 GPAT2Q6NUI2 795 aa18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 TGFBRAP1Q8WUH2 860 aa18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 DNAJC2Q99543 621 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 DHX36Q9H2U1 1008 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 ZHX2Q9Y6X8 837 aa18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 SIPA1L1O43166 1804 aa18.42■□□□□ 0.54
SNRPA1-210ENST00000560383 PDE6AP16499 860 aa18.41■□□□□ 0.54
SNRPA1-210ENST00000560383 DYNLL1P63167 89 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-210ENST00000560383 METTL16Q86W50 562 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-210ENST00000560383 RIOK1Q9BRS2 568 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-210ENST00000560383 TBC1D2Q9BYX2 928 aa18.41■□□□□ 0.54
SNRPA1-210ENST00000560383 ARHGAP39Q9C0H5 1083 aa18.41■□□□□ 0.54
SNRPA1-210ENST00000560383 BOLA2Q9H3K6 86 aa18.41■□□□□ 0.54
SNRPA1-210ENST00000560383 ECHDC1Q9NTX5 307 aa18.41■□□□□ 0.54
SNRPA1-210ENST00000560383 PAG1Q9NWQ8 432 aa18.41■□□□□ 0.54
SNRPA1-210ENST00000560383 FLT1P17948 1338 aa18.41■□□□□ 0.54
SNRPA1-210ENST00000560383 TCRBV5S4A2TA0A5A2 114 aa18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 SLURP2P0DP57 97 aa18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 HDAC1Q13547 482 aaPredicted RBP18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 SLC9C2Q5TAH2 1124 aa18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 MIGA1Q8NAN2 632 aa18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 EDC3Q96F86 508 aaKnown RBP18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 BCL11AQ9H165 835 aa18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 PI4KBQ9UBF8 816 aa18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 CPA4Q9UI42 421 aa18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 HERC5Q9UII4 1024 aaKnown RBP18.4■□□□□ 0.54
SNRPA1-210ENST00000560383 BCRP11274 1271 aa18.39■□□□□ 0.53
SNRPA1-210ENST00000560383 MAPKAPK5Q8IW41 473 aa18.39■□□□□ 0.53
SNRPA1-210ENST00000560383 TMEM106CQ9BVX2 250 aa18.39■□□□□ 0.53
SNRPA1-210ENST00000560383 HOXD10P28358 340 aa18.38■□□□□ 0.53
SNRPA1-210ENST00000560383 PSMC4P43686 418 aa18.38■□□□□ 0.53
SNRPA1-210ENST00000560383 TRIM47Q96LD4 638 aa18.38■□□□□ 0.53
SNRPA1-210ENST00000560383 SRRDQ9UH36 339 aa18.38■□□□□ 0.53
SNRPA1-210ENST00000560383 ZNF532Q9HCE3 1301 aa18.38■□□□□ 0.53
SNRPA1-210ENST00000560383 CTGFP29279 349 aa18.37■□□□□ 0.53
SNRPA1-210ENST00000560383 ADD2P35612 726 aa18.37■□□□□ 0.53
SNRPA1-210ENST00000560383 GADL1Q6ZQY3 521 aa18.37■□□□□ 0.53
SNRPA1-210ENST00000560383 FOXP4Q8IVH2 680 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-210ENST00000560383 PROCA1Q8NCQ7 364 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-210ENST00000560383 GPATCH3Q96I76 525 aa18.37■□□□□ 0.53
SNRPA1-210ENST00000560383 AGTPBP1Q9UPW5 1226 aa18.37■□□□□ 0.53
SNRPA1-210ENST00000560383 MAGEB6P1A0A0J9YX57 407 aa18.36■□□□□ 0.53
SNRPA1-210ENST00000560383 TRIM75PA6NK02 468 aa18.36■□□□□ 0.53
SNRPA1-210ENST00000560383 FAM196BA6NMK8 535 aa18.36■□□□□ 0.53
SNRPA1-210ENST00000560383 CYP2C8P10632 490 aa18.36■□□□□ 0.53
SNRPA1-210ENST00000560383 OSBPP22059 807 aa18.36■□□□□ 0.53
SNRPA1-210ENST00000560383 CAP2P40123 477 aa18.36■□□□□ 0.53
SNRPA1-210ENST00000560383 UBE3CQ15386 1083 aa18.36■□□□□ 0.53
SNRPA1-210ENST00000560383 TTC41PQ6P2S7 1318 aa18.36■□□□□ 0.53
SNRPA1-210ENST00000560383 GCC1Q96CN9 775 aa18.36■□□□□ 0.53
SNRPA1-210ENST00000560383 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.36■□□□□ 0.53
SNRPA1-210ENST00000560383 PALD1Q9ULE6 856 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms