RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 PPARAQ07869 468 aa17.06■□□□□ 0.32
SMAD6-204ENST00000559931 PRKG1Q13976 671 aa17.06■□□□□ 0.32
SMAD6-204ENST00000559931 DCAF15Q66K64 600 aa17.06■□□□□ 0.32
SMAD6-204ENST00000559931 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMAD6-204ENST00000559931 ATRNL1Q5VV63 1379 aa17.05■□□□□ 0.32
SMAD6-204ENST00000559931 SEC24BO95487 1268 aa17.05■□□□□ 0.32
SMAD6-204ENST00000559931 CTDSPL2Q05D32 466 aa17.05■□□□□ 0.32
SMAD6-204ENST00000559931 DYNLL2Q96FJ2 89 aa17.05■□□□□ 0.32
SMAD6-204ENST00000559931 SERPINB13Q9UIV8 391 aa17.05■□□□□ 0.32
SMAD6-204ENST00000559931 ZMYM6O95789 1325 aa17.04■□□□□ 0.32
SMAD6-204ENST00000559931 PPP1R12BO60237 982 aaPredicted RBP17.04■□□□□ 0.32
SMAD6-204ENST00000559931 MCCP23508 829 aa17.04■□□□□ 0.32
SMAD6-204ENST00000559931 EVX2Q03828 476 aa17.04■□□□□ 0.32
SMAD6-204ENST00000559931 RNF20Q5VTR2 975 aa17.04■□□□□ 0.32
SMAD6-204ENST00000559931 USP26Q9BXU7 913 aa17.04■□□□□ 0.32
SMAD6-204ENST00000559931 MKNK2Q9HBH9 465 aa17.04■□□□□ 0.32
SMAD6-204ENST00000559931 TOMM22Q9NS69 142 aa17.04■□□□□ 0.32
SMAD6-204ENST00000559931 COL2A1P02458 1487 aaPredicted RBP17.04■□□□□ 0.32
SMAD6-204ENST00000559931 PASKQ96RG2 1323 aa17.03■□□□□ 0.32
SMAD6-204ENST00000559931 FAM196BA6NMK8 535 aa17.03■□□□□ 0.32
SMAD6-204ENST00000559931 SMIM22K7EJ46 135 aa17.03■□□□□ 0.32
SMAD6-204ENST00000559931 CELF2O95319 508 aaKnown RBP17.03■□□□□ 0.32
SMAD6-204ENST00000559931 HSPA6P17066 643 aa17.03■□□□□ 0.32
SMAD6-204ENST00000559931 PDE4BQ07343 736 aa17.03■□□□□ 0.32
SMAD6-204ENST00000559931 ZNF341Q9BYN7 854 aa17.03■□□□□ 0.32
SMAD6-204ENST00000559931 EHD4Q9H223 541 aa17.03■□□□□ 0.32
SMAD6-204ENST00000559931 UPF2Q9HAU5 1272 aaKnown RBP17.03■□□□□ 0.32
SMAD6-204ENST00000559931 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
SMAD6-204ENST00000559931 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
SMAD6-204ENST00000559931 HERC5Q9UII4 1024 aaKnown RBP17.03■□□□□ 0.32
SMAD6-204ENST00000559931 SLURP2P0DP57 97 aa17.02■□□□□ 0.32
SMAD6-204ENST00000559931 CDK8P49336 464 aa17.02■□□□□ 0.32
SMAD6-204ENST00000559931 APLP1P51693 650 aa17.02■□□□□ 0.32
SMAD6-204ENST00000559931 HTRA3P83110 453 aa17.02■□□□□ 0.32
SMAD6-204ENST00000559931 CREB3L3Q68CJ9 461 aa17.02■□□□□ 0.32
SMAD6-204ENST00000559931 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
SMAD6-204ENST00000559931 C2orf69Q8N8R5 385 aa17.02■□□□□ 0.32
SMAD6-204ENST00000559931 BACH2Q9BYV9 841 aa17.02■□□□□ 0.32
SMAD6-204ENST00000559931 SWAP70Q9UH65 585 aa17.02■□□□□ 0.32
SMAD6-204ENST00000559931 ANAPC4Q9UJX5 808 aa17.02■□□□□ 0.32
SMAD6-204ENST00000559931 SLC27A2O14975 620 aa17.01■□□□□ 0.31
SMAD6-204ENST00000559931 EPB41L2O43491 1005 aaKnown RBP17.01■□□□□ 0.31
SMAD6-204ENST00000559931 TBC1D12O60347 775 aa17.01■□□□□ 0.31
SMAD6-204ENST00000559931 CYP21A2P08686 494 aa17.01■□□□□ 0.31
SMAD6-204ENST00000559931 ZKSCAN1P17029 563 aaPredicted RBP17.01■□□□□ 0.31
SMAD6-204ENST00000559931 NECTIN1Q15223 517 aa17.01■□□□□ 0.31
SMAD6-204ENST00000559931 RRP12Q5JTH9 1297 aaKnown RBP17.01■□□□□ 0.31
SMAD6-204ENST00000559931 ARMC9Q7Z3E5 817 aa17.01■□□□□ 0.31
SMAD6-204ENST00000559931 ZNF444Q8N0Y2 327 aaPredicted RBP17.01■□□□□ 0.31
SMAD6-204ENST00000559931 SLC44A5Q8NCS7 719 aa17.01■□□□□ 0.31
SMAD6-204ENST00000559931 RNF41Q9H4P4 317 aaPredicted RBP17.01■□□□□ 0.31
SMAD6-204ENST00000559931 INCENPQ9NQS7 918 aa17.01■□□□□ 0.31
SMAD6-204ENST00000559931 ANGEL1Q9UNK9 670 aaKnown RBP17.01■□□□□ 0.31
SMAD6-204ENST00000559931 FZD1Q9UP38 647 aa17.01■□□□□ 0.31
SMAD6-204ENST00000559931 LAMB1P07942 1786 aa17■□□□□ 0.31
SMAD6-204ENST00000559931 MYH8P13535 1937 aa17■□□□□ 0.31
SMAD6-204ENST00000559931 USP2O75604 605 aaPredicted RBP17■□□□□ 0.31
SMAD6-204ENST00000559931 PRDM1O75626 825 aa17■□□□□ 0.31
SMAD6-204ENST00000559931 IREB2P48200 963 aaKnown RBP17■□□□□ 0.31
SMAD6-204ENST00000559931 TRDNQ13061 729 aa17■□□□□ 0.31
SMAD6-204ENST00000559931 CERKLQ49MI3 558 aaPredicted RBP17■□□□□ 0.31
SMAD6-204ENST00000559931 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
SMAD6-204ENST00000559931 AKNAD1Q5T1N1 836 aa17■□□□□ 0.31
SMAD6-204ENST00000559931 C16orf86Q6ZW13 317 aa17■□□□□ 0.31
SMAD6-204ENST00000559931 GBA2Q9HCG7 927 aaPredicted RBP17■□□□□ 0.31
SMAD6-204ENST00000559931 MPHOSPH10O00566 681 aaKnown RBP16.99■□□□□ 0.31
SMAD6-204ENST00000559931 HSPA4P34932 840 aa16.99■□□□□ 0.31
SMAD6-204ENST00000559931 MAP3K10Q02779 954 aa16.99■□□□□ 0.31
SMAD6-204ENST00000559931 GABPAQ06546 454 aa16.99■□□□□ 0.31
SMAD6-204ENST00000559931 METTL16Q86W50 562 aaKnown RBP16.99■□□□□ 0.31
SMAD6-204ENST00000559931 WRNIP1Q96S55 665 aa16.99■□□□□ 0.31
SMAD6-204ENST00000559931 TAOK2Q9UL54 1235 aa16.99■□□□□ 0.31
SMAD6-204ENST00000559931 TMEM88BA6NKF7 163 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 UBE2Q2LH0YL09 131 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 RANBP6O60518 1105 aaKnown RBP16.98■□□□□ 0.31
SMAD6-204ENST00000559931 SHMT1P34896 483 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 MAP3K9P80192 1104 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 CST9Q5W186 159 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 MOB2Q70IA6 237 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 TBC1D10CQ8IV04 446 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 STAG1Q8WVM7 1258 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 NBPF3Q9H094 633 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 CABP5Q9NP86 173 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 SIPA1L1O43166 1804 aa16.98■□□□□ 0.31
SMAD6-204ENST00000559931 E7EWF7 191 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 GDF11O95390 407 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 PCP11498 1178 aaKnown RBP16.97■□□□□ 0.31
SMAD6-204ENST00000559931 TATDN1Q6P1N9 297 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 RALYLQ86SE5 291 aaKnown RBP16.97■□□□□ 0.31
SMAD6-204ENST00000559931 KLRG1Q96E93 195 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 KRT23Q9C075 422 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 DNAJC18Q9H819 358 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 CNNM2Q9H8M5 875 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 CSADQ9Y600 493 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 LAMA4Q16363 1823 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 ROBO3Q96MS0 1386 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 SSC5DA1L4H1 1573 aa16.97■□□□□ 0.31
SMAD6-204ENST00000559931 PHF20L1A8MW92 1017 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 ORC4O43929 436 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 CTNND1O60716 968 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms