RNA–Protein interactions for RNA: ENST00000559663.1

CDK12-205, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-205ENST00000559663 FAM196BA6NMK8 535 aa10.08□□□□□ -0.8
CDK12-205ENST00000559663 MAP4K4O95819 1239 aaPredicted RBP10.08□□□□□ -0.8
CDK12-205ENST00000559663 MECOMQ03112 1051 aa10.08□□□□□ -0.8
CDK12-205ENST00000559663 PABPC4Q13310 644 aaKnown RBP eCLIP10.08□□□□□ -0.82e-7■■■□□ 17.4
CDK12-205ENST00000559663 LRIT3Q3SXY7 679 aa10.08□□□□□ -0.8
CDK12-205ENST00000559663 ZNF384Q8TF68 577 aa10.08□□□□□ -0.8
CDK12-205ENST00000559663 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDK12-205ENST00000559663 HMX1Q9NP08 348 aaPredicted RBP10.08□□□□□ -0.8
CDK12-205ENST00000559663 ZMYND8Q9ULU4 1186 aaPredicted RBP10.08□□□□□ -0.8
CDK12-205ENST00000559663 COL2A1P02458 1487 aaPredicted RBP10.08□□□□□ -0.8
CDK12-205ENST00000559663 CUL9Q8IWT3 2517 aa10.08□□□□□ -0.8
CDK12-205ENST00000559663 DOCK2Q92608 1830 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 LAMA2P24043 3122 aaKnown RBP10.07□□□□□ -0.8
CDK12-205ENST00000559663 HMGCS2P54868 508 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 TIMM10P62072 90 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 TRIM32Q13049 653 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 RRP1BQ14684 758 aaKnown RBP10.07□□□□□ -0.8
CDK12-205ENST00000559663 MVPQ14764 893 aaKnown RBP10.07□□□□□ -0.8
CDK12-205ENST00000559663 SH3D19Q5HYK7 790 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 MAP3K21Q5TCX8 1036 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 DEFB123Q8N688 67 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 TRIB2Q92519 343 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 ASCC2Q9H1I8 757 aaPredicted RBP10.07□□□□□ -0.8
CDK12-205ENST00000559663 C11orf49Q9H6J7 331 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 SMC4Q9NTJ3 1288 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 MORF4L1Q9UBU8 362 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 OGDHLQ9ULD0 1010 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 HDAC5Q9UQL6 1122 aa10.07□□□□□ -0.8
CDK12-205ENST00000559663 SPTBN5Q9NRC6 3674 aaKnown RBP10.07□□□□□ -0.8
CDK12-205ENST00000559663 A0A1B0GUL7 405 aa10.06□□□□□ -0.8
CDK12-205ENST00000559663 USP17L5A8MUK1 530 aa10.06□□□□□ -0.8
CDK12-205ENST00000559663 CAP2P40123 477 aa10.06□□□□□ -0.8
CDK12-205ENST00000559663 MAGEA10P43363 369 aaPredicted RBP10.06□□□□□ -0.8
CDK12-205ENST00000559663 SLFN5Q08AF3 891 aa10.06□□□□□ -0.8
CDK12-205ENST00000559663 TDHQ8IZJ6 230 aa10.06□□□□□ -0.8
CDK12-205ENST00000559663 NSUN4Q96CB9 384 aaKnown RBP10.06□□□□□ -0.8
CDK12-205ENST00000559663 XAGE2Q96GT9 111 aa10.06□□□□□ -0.8
CDK12-205ENST00000559663 STXBP5LQ9Y2K9 1186 aa10.06□□□□□ -0.8
CDK12-205ENST00000559663 DOCK1Q14185 1865 aa10.06□□□□□ -0.8
CDK12-205ENST00000559663 PFASO15067 1338 aa10.06□□□□□ -0.8
CDK12-205ENST00000559663 MGAMO43451 1857 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 LDHCP07864 332 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 XRCC5P13010 732 aaKnown RBP10.05□□□□□ -0.8
CDK12-205ENST00000559663 PRKAR2AP13861 404 aaKnown RBP10.05□□□□□ -0.8
CDK12-205ENST00000559663 SYN1P17600 705 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 GSTO1P78417 241 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 TFCP2Q12800 502 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 Q7L0L9 218 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 SOCS4Q8WXH5 440 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 WDR18Q9BV38 432 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 AS3MTQ9HBK9 375 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 HMG20BQ9P0W2 317 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 HERC5Q9UII4 1024 aaKnown RBP10.05□□□□□ -0.8
CDK12-205ENST00000559663 AKAP2Q9Y2D5 859 aa10.05□□□□□ -0.8
CDK12-205ENST00000559663 LOC285556D6RIA3 1793 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 COL6A1P12109 1028 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 CYP2B6P20813 491 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 HOXA7P31268 230 aaPredicted RBP10.04□□□□□ -0.8
CDK12-205ENST00000559663 BACE1P56817 501 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 IRX3P78415 501 aaPredicted RBP10.04□□□□□ -0.8
CDK12-205ENST00000559663 MTMR2Q13614 643 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 PI16Q6UXB8 463 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 TEX11Q8IYF3 940 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 SPATA5Q8NB90 893 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 GPRC5AQ8NFJ5 357 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 MEIS3Q99687 375 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 NUDT12Q9BQG2 462 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 API5Q9BZZ5 524 aaKnown RBP10.04□□□□□ -0.8
CDK12-205ENST00000559663 UBE2OQ9C0C9 1292 aaKnown RBP10.04□□□□□ -0.8
CDK12-205ENST00000559663 TXNRD2Q9NNW7 524 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 MTMR10Q9NXD2 777 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 NOB1Q9ULX3 412 aaKnown RBP10.04□□□□□ -0.8
CDK12-205ENST00000559663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.04□□□□□ -0.8
CDK12-205ENST00000559663 PHIPQ8WWQ0 1821 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 EYSQ5T1H1 3165 aa10.04□□□□□ -0.8
CDK12-205ENST00000559663 MYH13Q9UKX3 1938 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 SRGAP3O43295 1099 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 ASNSP08243 561 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 ZKSCAN1P17029 563 aaPredicted RBP10.03□□□□□ -0.8
CDK12-205ENST00000559663 ARID4AP29374 1257 aaPredicted RBP10.03□□□□□ -0.8
CDK12-205ENST00000559663 HERVK_113P62684 666 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 MTX1Q13505 466 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 TBC1D9Q6ZT07 1266 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 TRMT44Q8IYL2 757 aaKnown RBP10.03□□□□□ -0.8
CDK12-205ENST00000559663 SH3RF3Q8TEJ3 882 aaPredicted RBP10.03□□□□□ -0.8
CDK12-205ENST00000559663 USP6NLQ92738 828 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 P2RX7Q99572 595 aaKnown RBP10.03□□□□□ -0.8
CDK12-205ENST00000559663 CDH23Q9H251 3354 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 DHX36Q9H2U1 1008 aaKnown RBP10.03□□□□□ -0.8
CDK12-205ENST00000559663 TMOD4Q9NZQ9 345 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 RAI14Q9P0K7 980 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 PI4KBQ9UBF8 816 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 PTPRFP10586 1907 aa10.03□□□□□ -0.8
CDK12-205ENST00000559663 DNAH12Q6ZR08 3092 aa10.02□□□□□ -0.81
CDK12-205ENST00000559663 AK9Q5TCS8 1911 aa10.02□□□□□ -0.81
CDK12-205ENST00000559663 PEX10O60683 326 aa10.02□□□□□ -0.81
CDK12-205ENST00000559663 CT47B1P0C2W7 299 aaPredicted RBP10.02□□□□□ -0.81
CDK12-205ENST00000559663 MAPK4P31152 587 aa10.02□□□□□ -0.81
CDK12-205ENST00000559663 JAG1P78504 1218 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms