RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 NDUFB9Q9Y6M9 179 aa23.34■■□□□ 1.33
KNSTRN-208ENST00000559604 CYP2C8P10632 490 aa23.33■■□□□ 1.33
KNSTRN-208ENST00000559604 PLCG2P16885 1265 aa23.33■■□□□ 1.33
KNSTRN-208ENST00000559604 RRP1BQ14684 758 aaKnown RBP23.33■■□□□ 1.33
KNSTRN-208ENST00000559604 GADL1Q6ZQY3 521 aa23.33■■□□□ 1.33
KNSTRN-208ENST00000559604 AACSQ86V21 672 aa23.33■■□□□ 1.33
KNSTRN-208ENST00000559604 ZBTB40Q9NUA8 1239 aa23.33■■□□□ 1.33
KNSTRN-208ENST00000559604 DDX19BQ9UMR2 479 aa23.33■■□□□ 1.33
KNSTRN-208ENST00000559604 TRIM75PA6NK02 468 aa23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 ECM2O94769 699 aaPredicted RBP23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 GNRH1P01148 92 aa23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 MAPKAPK5Q8IW41 473 aa23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 RPAP2Q8IXW5 612 aaPredicted RBP23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 RHPN1Q8TCX5 695 aa23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 TGFBRAP1Q8WUH2 860 aa23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 ZNF333Q96JL9 665 aa23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 IL1RAPL2Q9NP60 686 aa23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 RCAN3Q9UKA8 241 aa23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 FLT1P17948 1338 aa23.32■■□□□ 1.32
KNSTRN-208ENST00000559604 MGAMO43451 1857 aa23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 BCRP11274 1271 aa23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 CAP2P40123 477 aa23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 SLC9C1Q4G0N8 1177 aa23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 HSP90AB4PQ58FF6 505 aa23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 SIRT2Q8IXJ6 389 aa23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 TRIM47Q96LD4 638 aa23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 DHX36Q9H2U1 1008 aaKnown RBP23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 ANTXR1Q9H6X2 564 aa23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 PI4KBQ9UBF8 816 aa23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 HERC5Q9UII4 1024 aaKnown RBP23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 SLC45A1Q9Y2W3 748 aa23.31■■□□□ 1.32
KNSTRN-208ENST00000559604 IDH1O75874 414 aaKnown RBP23.3■■□□□ 1.32
KNSTRN-208ENST00000559604 CYP7A1P22680 504 aa23.3■■□□□ 1.32
KNSTRN-208ENST00000559604 PSMC4P43686 418 aa23.3■■□□□ 1.32
KNSTRN-208ENST00000559604 DYNLL1P63167 89 aaKnown RBP23.3■■□□□ 1.32
KNSTRN-208ENST00000559604 MKI67P46013 3256 aaKnown RBP23.3■■□□□ 1.32
KNSTRN-208ENST00000559604 PRMT2P55345 433 aa23.29■■□□□ 1.32
KNSTRN-208ENST00000559604 NBPF11Q86T75 865 aa23.29■■□□□ 1.32
KNSTRN-208ENST00000559604 LOC285556D6RIA3 1793 aa23.29■■□□□ 1.32
KNSTRN-208ENST00000559604 MYH1P12882 1939 aa23.28■■□□□ 1.32
KNSTRN-208ENST00000559604 MAGEB6Q8N7X4 407 aa23.28■■□□□ 1.32
KNSTRN-208ENST00000559604 DNAJC18Q9H819 358 aa23.28■■□□□ 1.32
KNSTRN-208ENST00000559604 SRRDQ9UH36 339 aa23.28■■□□□ 1.32
KNSTRN-208ENST00000559604 PALD1Q9ULE6 856 aa23.28■■□□□ 1.32
KNSTRN-208ENST00000559604 APBB1O00213 710 aa23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 HMMRO75330 724 aa23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 FMNL1O95466 1100 aaPredicted RBP23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 OSBPP22059 807 aa23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 SPP2Q13103 211 aa23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 TREML2Q5T2D2 321 aa23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 METTL16Q86W50 562 aaKnown RBP23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 MIGA1Q8NAN2 632 aa23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 ZNF280CQ8ND82 737 aa23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 SH3TC2Q8TF17 1288 aa23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 AGTPBP1Q9UPW5 1226 aa23.27■■□□□ 1.32
KNSTRN-208ENST00000559604 USP17L5A8MUK1 530 aa23.26■■□□□ 1.31
KNSTRN-208ENST00000559604 EN2P19622 333 aaPredicted RBP23.26■■□□□ 1.31
KNSTRN-208ENST00000559604 FOXP4Q8IVH2 680 aaPredicted RBP23.26■■□□□ 1.31
KNSTRN-208ENST00000559604 KIF1BPQ96EK5 621 aa23.26■■□□□ 1.31
KNSTRN-208ENST00000559604 TBC1D2Q9BYX2 928 aa23.26■■□□□ 1.31
KNSTRN-208ENST00000559604 SAP30BPQ9UHR5 308 aaKnown RBP23.26■■□□□ 1.31
KNSTRN-208ENST00000559604 JAG1P78504 1218 aa23.25■■□□□ 1.31
KNSTRN-208ENST00000559604 MAP3K12Q12852 859 aa23.25■■□□□ 1.31
KNSTRN-208ENST00000559604 C20orf194Q5TEA3 1177 aa23.25■■□□□ 1.31
KNSTRN-208ENST00000559604 CLASRPQ8N2M8 674 aaKnown RBP23.25■■□□□ 1.31
KNSTRN-208ENST00000559604 PROCA1Q8NCQ7 364 aaPredicted RBP23.25■■□□□ 1.31
KNSTRN-208ENST00000559604 TMEM106CQ9BVX2 250 aa23.25■■□□□ 1.31
KNSTRN-208ENST00000559604 HOXD10P28358 340 aa23.24■■□□□ 1.31
KNSTRN-208ENST00000559604 HMGCS2P54868 508 aa23.24■■□□□ 1.31
KNSTRN-208ENST00000559604 CHMP4BQ9H444 224 aaKnown RBP23.24■■□□□ 1.31
KNSTRN-208ENST00000559604 MYPNQ86TC9 1320 aa23.24■■□□□ 1.31
KNSTRN-208ENST00000559604 MYCP01106 439 aaPredicted RBP23.23■■□□□ 1.31
KNSTRN-208ENST00000559604 FCGRTP55899 365 aa23.23■■□□□ 1.31
KNSTRN-208ENST00000559604 SHROOM1Q2M3G4 852 aaPredicted RBP23.23■■□□□ 1.31
KNSTRN-208ENST00000559604 SLC4A8Q2Y0W8 1093 aa23.23■■□□□ 1.31
KNSTRN-208ENST00000559604 PRPF38BQ5VTL8 546 aaKnown RBP23.23■■□□□ 1.31
KNSTRN-208ENST00000559604 TMED8Q6PL24 325 aaPredicted RBP23.23■■□□□ 1.31
KNSTRN-208ENST00000559604 CERS3Q8IU89 383 aa23.23■■□□□ 1.31
KNSTRN-208ENST00000559604 CRACR2BQ8N4Y2 399 aaPredicted RBP23.23■■□□□ 1.31
KNSTRN-208ENST00000559604 SMCR8Q8TEV9 937 aaPredicted RBP23.23■■□□□ 1.31
KNSTRN-208ENST00000559604 RAB11FIP3O75154 756 aa23.22■■□□□ 1.31
KNSTRN-208ENST00000559604 ASNSP08243 561 aa23.22■■□□□ 1.31
KNSTRN-208ENST00000559604 PDE3AQ14432 1141 aa23.22■■□□□ 1.31
KNSTRN-208ENST00000559604 SH3D19Q5HYK7 790 aa23.22■■□□□ 1.31
KNSTRN-208ENST00000559604 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.22■■□□□ 1.31
KNSTRN-208ENST00000559604 WDR18Q9BV38 432 aa23.22■■□□□ 1.31
KNSTRN-208ENST00000559604 AS3MTQ9HBK9 375 aa23.22■■□□□ 1.31
KNSTRN-208ENST00000559604 DOCK3Q8IZD9 2030 aa23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 GDF11O95390 407 aa23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 HLA-DOAP06340 250 aa23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 IFIT2P09913 472 aaKnown RBP23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 USP5P45974 858 aa23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 PRKCZQ05513 592 aa23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 TTF1Q15361 905 aaPredicted RBP23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 RAET1EQ8TD07 263 aa23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 RIOK1Q9BRS2 568 aaKnown RBP23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 TRIM34Q9BYJ4 488 aa23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 PNMA3Q9UL41 463 aa23.21■■□□□ 1.31
KNSTRN-208ENST00000559604 BCL11AQ9H165 835 aa23.2■■□□□ 1.3
KNSTRN-208ENST00000559604 GABRQQ9UN88 632 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms