RNA–Protein interactions for RNA: ENST00000559591.5

KNSTRN-207, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-207ENST00000559591 PSMC4P43686 418 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 NHLH1Q02575 133 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 CCDC30Q5VVM6 783 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 PDCL2Q8N4E4 241 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 PPM1EQ8WY54 764 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 RTF1Q92541 710 aaKnown RBP12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 TM6SF1Q9BZW5 370 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 SPTLC3Q9NUV7 552 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 TMEM63CQ9P1W3 806 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 ZDHHC9Q9Y397 364 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 R3HCC1Q9Y3T6 440 aaKnown RBP12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 USP16Q9Y5T5 823 aa12.66□□□□□ -0.38
KNSTRN-207ENST00000559591 UBN2Q6ZU65 1347 aa12.65□□□□□ -0.38
KNSTRN-207ENST00000559591 SUSD4Q5VX71 490 aa12.65□□□□□ -0.38
KNSTRN-207ENST00000559591 CHMP4CQ96CF2 233 aa12.65□□□□□ -0.38
KNSTRN-207ENST00000559591 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
KNSTRN-207ENST00000559591 CCDC94Q9BW85 323 aaPredicted RBP12.65□□□□□ -0.38
KNSTRN-207ENST00000559591 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
KNSTRN-207ENST00000559591 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
KNSTRN-207ENST00000559591 CCL15-CCL14A0A0B4J2E2 113 aa12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 FAM86C2PA6NEL3 165 aa12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 HIP1O00291 1037 aa12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 HMOX1P09601 288 aa12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 PDCP20941 246 aa12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 CHMLP26374 656 aa12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 HSPA4P34932 840 aa12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 CCL15Q16663 113 aa12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 GTPBP4Q9BZE4 634 aaKnown RBP12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
KNSTRN-207ENST00000559591 TTC41PQ6P2S7 1318 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 LRRC37AA6NMS7 1700 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 SYCE3A1L190 88 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 UNCXA6NJT0 531 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 WNT10BO00744 389 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 NTSR2O95665 410 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 GRAPQ13588 217 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 TAF3Q5VWG9 929 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 APOBEC3FQ8IUX4 373 aaKnown RBP12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 OPTNQ96CV9 577 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 GMLQ99445 158 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 EYA3Q99504 573 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 POLLQ9UGP5 575 aa12.63□□□□□ -0.39
KNSTRN-207ENST00000559591 ELP1O95163 1332 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 ADGRA2Q96PE1 1338 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 CACNA1GO43497 2377 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 RPAP1Q9BWH6 1393 aaPredicted RBP12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 GPR37L1O60883 481 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 INHAP05111 366 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 PRKCZQ05513 592 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 TEFQ10587 303 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 FKBP5Q13451 457 aaPredicted RBP12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 NBPF10Q6P3W6 841 aaKnown RBP12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 CREBRFQ8IUR6 639 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 C11orf49Q9H6J7 331 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 C11orf16Q9NQ32 467 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 PAK6Q9NQU5 681 aaPredicted RBP12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 RAD50Q92878 1312 aa12.62□□□□□ -0.39
KNSTRN-207ENST00000559591 SASH1O94885 1247 aa12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 KIF20AO95235 890 aa12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 ZSCAN22P10073 491 aaPredicted RBP12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 HOXB3P14651 431 aaPredicted RBP12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 HOXB1P14653 301 aaPredicted RBP12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 ANKLE1Q8NAG6 615 aa12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 SSH3Q8TE77 659 aa12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 COL26A1Q96A83 441 aa12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 FEZ1Q99689 392 aa12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 LBHD1Q9BQE6 289 aaPredicted RBP12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 LIMCH1Q9UPQ0 1083 aa12.61□□□□□ -0.39
KNSTRN-207ENST00000559591 NEMFO60524 1076 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 TUBB4AP04350 444 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 IREB2P48200 963 aaKnown RBP12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 SMAD3P84022 425 aaKnown RBP12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 NOLC1Q14978 699 aaKnown RBP eCLIP12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 ANKRD1Q15327 319 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 TMC4Q7Z404 712 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 ERC1Q8IUD2 1116 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 ZGPATQ8N5A5 531 aaKnown RBP12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 HELBQ8NG08 1087 aaPredicted RBP12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 KCNB2Q92953 911 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 RNF166Q96A37 237 aaPredicted RBP12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 KIF1BPQ96EK5 621 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 MEIS3Q99687 375 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 ELP3Q9H9T3 547 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 KIF3AQ9Y496 699 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 XIRP2A4UGR9 3374 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 NUP98P52948 1817 aa12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 TCF20Q9UGU0 1960 aaKnown RBP12.6□□□□□ -0.39
KNSTRN-207ENST00000559591 DDX60LQ5H9U9 1706 aaKnown RBP12.59□□□□□ -0.39
KNSTRN-207ENST00000559591 COL1A1P02452 1464 aaPredicted RBP12.59□□□□□ -0.39
KNSTRN-207ENST00000559591 SMIM22K7EJ46 135 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms