RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 NFAT5O94916 1531 aa9.04□□□□□ -0.96
ZEB1-216ENST00000559496 USP19O94966 1318 aa9.04□□□□□ -0.96
ZEB1-216ENST00000559496 ARHGEF10O15013 1369 aa9.04□□□□□ -0.96
ZEB1-216ENST00000559496 FLT4P35916 1363 aa9.04□□□□□ -0.96
ZEB1-216ENST00000559496 PDIA4P13667 645 aaKnown RBP9.03□□□□□ -0.96
ZEB1-216ENST00000559496 IL13P35225 146 aa9.03□□□□□ -0.96
ZEB1-216ENST00000559496 RUNDC1Q96C34 613 aa9.03□□□□□ -0.96
ZEB1-216ENST00000559496 USP35Q9P2H5 1018 aa9.03□□□□□ -0.96
ZEB1-216ENST00000559496 SPATA31A3Q5VYP0 1347 aa9.03□□□□□ -0.96
ZEB1-216ENST00000559496 RTL1A6NKG5 1358 aa9.03□□□□□ -0.96
ZEB1-216ENST00000559496 KIF24Q5T7B8 1368 aa9.03□□□□□ -0.96
ZEB1-216ENST00000559496 LTN1O94822 1766 aa9.03□□□□□ -0.96
ZEB1-216ENST00000559496 APAF1O14727 1248 aa9.02□□□□□ -0.97
ZEB1-216ENST00000559496 RPLP1P05386 114 aaKnown RBP9.02□□□□□ -0.97
ZEB1-216ENST00000559496 HYAL2Q12891 473 aa9.02□□□□□ -0.97
ZEB1-216ENST00000559496 EIF4A2Q14240 407 aaKnown RBP9.02□□□□□ -0.97
ZEB1-216ENST00000559496 HSP90AB2PQ58FF8 381 aa9.02□□□□□ -0.97
ZEB1-216ENST00000559496 SHISA2Q6UWI4 295 aa9.02□□□□□ -0.97
ZEB1-216ENST00000559496 CACTIN-AS1Q8N1I8 211 aa9.02□□□□□ -0.97
ZEB1-216ENST00000559496 ABI2Q9NYB9 513 aaPredicted RBP9.02□□□□□ -0.97
ZEB1-216ENST00000559496 NHSL1Q5SYE7 1610 aa9.02□□□□□ -0.97
ZEB1-216ENST00000559496 MED1Q15648 1581 aaPredicted RBP9.02□□□□□ -0.97
ZEB1-216ENST00000559496 ZBTB7CA1YPR0 619 aa9.01□□□□□ -0.97
ZEB1-216ENST00000559496 GCP02774 474 aa9.01□□□□□ -0.97
ZEB1-216ENST00000559496 HOXC9P31274 260 aa9.01□□□□□ -0.97
ZEB1-216ENST00000559496 SCNN1AP37088 669 aa9.01□□□□□ -0.97
ZEB1-216ENST00000559496 NOM1Q5C9Z4 860 aaKnown RBP9.01□□□□□ -0.97
ZEB1-216ENST00000559496 XP32Q5T750 250 aa9.01□□□□□ -0.97
ZEB1-216ENST00000559496 PDE12Q6L8Q7 609 aaKnown RBP9.01□□□□□ -0.97
ZEB1-216ENST00000559496 IL22RA1Q8N6P7 574 aa9.01□□□□□ -0.97
ZEB1-216ENST00000559496 GTF3C2Q8WUA4 911 aaPredicted RBP9.01□□□□□ -0.97
ZEB1-216ENST00000559496 PNNQ9H307 717 aaKnown RBP9.01□□□□□ -0.97
ZEB1-216ENST00000559496 IQSEC2Q5JU85 1478 aa9.01□□□□□ -0.97
ZEB1-216ENST00000559496 ROBO1Q9Y6N7 1651 aa9.01□□□□□ -0.97
ZEB1-216ENST00000559496 GDF6Q6KF10 455 aaPredicted RBP9□□□□□ -0.97
ZEB1-216ENST00000559496 IGF2-ASQ6U949 168 aa9□□□□□ -0.97
ZEB1-216ENST00000559496 TXNRD3Q86VQ6 643 aa9□□□□□ -0.97
ZEB1-216ENST00000559496 ATCAYQ86WG3 371 aa9□□□□□ -0.97
ZEB1-216ENST00000559496 NGEFQ8N5V2 710 aa9□□□□□ -0.97
ZEB1-216ENST00000559496 SPACA7Q96KW9 195 aa9□□□□□ -0.97
ZEB1-216ENST00000559496 USP21Q9UK80 565 aa9□□□□□ -0.97
ZEB1-216ENST00000559496 MAPK8IP3Q9UPT6 1336 aa9□□□□□ -0.97
ZEB1-216ENST00000559496 PHRF1Q9P1Y6 1649 aaKnown RBP9□□□□□ -0.97
ZEB1-216ENST00000559496 DYRK3O43781 588 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 TOM1O60784 492 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 NEFMP07197 916 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 HMOX1P09601 288 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 PRKAR2BP31323 418 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 PDE3BQ13370 1112 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 AAMPQ13685 434 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 COL13A1Q5TAT6 717 aaPredicted RBP8.99□□□□□ -0.97
ZEB1-216ENST00000559496 ARHGEF25Q86VW2 580 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 TCP11L2Q8N4U5 519 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 IP6K1Q92551 441 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 PLEKHF1Q96S99 279 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 ELP3Q9H9T3 547 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 RGPD1P0DJD0 1748 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 PCSK2P16519 638 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 AHDC1Q5TGY3 1603 aaPredicted RBP8.99□□□□□ -0.97
ZEB1-216ENST00000559496 XKR5Q6UX68 686 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 MTMR7Q9Y216 660 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 RRP7AQ9Y3A4 280 aaKnown RBP8.99□□□□□ -0.97
ZEB1-216ENST00000559496 CRYBG1Q9Y4K1 1723 aa8.99□□□□□ -0.97
ZEB1-216ENST00000559496 DEAF1O75398 565 aaPredicted RBP8.98□□□□□ -0.97
ZEB1-216ENST00000559496 KIF4AO95239 1232 aa8.98□□□□□ -0.97
ZEB1-216ENST00000559496 EIF1AXP47813 144 aaKnown RBP8.98□□□□□ -0.97
ZEB1-216ENST00000559496 ZC3H6P61129 1189 aaKnown RBP8.98□□□□□ -0.97
ZEB1-216ENST00000559496 DNM1Q05193 864 aaKnown RBP8.98□□□□□ -0.97
ZEB1-216ENST00000559496 SULT6B1Q6IMI4 303 aa8.98□□□□□ -0.97
ZEB1-216ENST00000559496 ALKBH2Q6NS38 261 aa8.98□□□□□ -0.97
ZEB1-216ENST00000559496 ZNF438Q7Z4V0 828 aa8.98□□□□□ -0.97
ZEB1-216ENST00000559496 Q8N3U1 123 aa8.98□□□□□ -0.97
ZEB1-216ENST00000559496 TTC16Q8NEE8 873 aa8.98□□□□□ -0.97
ZEB1-216ENST00000559496 EDEM1Q92611 657 aa8.98□□□□□ -0.97
ZEB1-216ENST00000559496 LTV1Q96GA3 475 aaPredicted RBP8.98□□□□□ -0.97
ZEB1-216ENST00000559496 SSBP4Q9BWG4 385 aaPredicted RBP8.98□□□□□ -0.97
ZEB1-216ENST00000559496 MUC3BQ9H195 1237 aa8.98□□□□□ -0.97
ZEB1-216ENST00000559496 SRA1Q9HD15 236 aaKnown RBP8.98□□□□□ -0.97
ZEB1-216ENST00000559496 TRIM33Q9UPN9 1127 aa8.98□□□□□ -0.97
ZEB1-216ENST00000559496 IGSF1Q8N6C5 1336 aa8.97□□□□□ -0.97
ZEB1-216ENST00000559496 ZNF521Q96K83 1311 aa8.97□□□□□ -0.97
ZEB1-216ENST00000559496 NPR3P17342 541 aa8.97□□□□□ -0.97
ZEB1-216ENST00000559496 MPSTP25325 297 aa8.97□□□□□ -0.97
ZEB1-216ENST00000559496 MZF1P28698 734 aaPredicted RBP8.97□□□□□ -0.97
ZEB1-216ENST00000559496 TMPOP42166 694 aaKnown RBP8.97□□□□□ -0.97
ZEB1-216ENST00000559496 PHLDB3Q6NSJ2 640 aa8.97□□□□□ -0.97
ZEB1-216ENST00000559496 AEBP1Q8IUX7 1158 aa8.97□□□□□ -0.97
ZEB1-216ENST00000559496 MAP4K3Q8IVH8 894 aa8.97□□□□□ -0.97
ZEB1-216ENST00000559496 TMEM63CQ9P1W3 806 aa8.97□□□□□ -0.97
ZEB1-216ENST00000559496 CPDO75976 1380 aa8.96□□□□□ -0.98
ZEB1-216ENST00000559496 ABCA3Q99758 1704 aa8.96□□□□□ -0.98
ZEB1-216ENST00000559496 DLL1O00548 723 aa8.96□□□□□ -0.98
ZEB1-216ENST00000559496 SMNDC1O75940 238 aaKnown RBP eCLIP8.96□□□□□ -0.98
ZEB1-216ENST00000559496 PDGFAP04085 211 aa8.96□□□□□ -0.98
ZEB1-216ENST00000559496 H2AFB1P0C5Y9 115 aa8.96□□□□□ -0.98
ZEB1-216ENST00000559496 H2AFB2P0C5Z0 115 aa8.96□□□□□ -0.98
ZEB1-216ENST00000559496 PIP4K2BP78356 416 aa8.96□□□□□ -0.98
ZEB1-216ENST00000559496 CCDC27Q2M243 656 aa8.96□□□□□ -0.98
ZEB1-216ENST00000559496 CEP135Q66GS9 1140 aa8.96□□□□□ -0.98
ZEB1-216ENST00000559496 FAM43AQ8N2R8 423 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms