RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 FRMD6Q96NE9 622 aa7.45□□□□□ -1.22
CASC4-207ENST00000559037 SLC52A1Q9NWF4 448 aa7.45□□□□□ -1.22
CASC4-207ENST00000559037 IQGAP3Q86VI3 1631 aa7.45□□□□□ -1.22
CASC4-207ENST00000559037 RRBP1Q9P2E9 1410 aaKnown RBP7.44□□□□□ -1.22
CASC4-207ENST00000559037 CPS1P31327 1500 aa7.44□□□□□ -1.22
CASC4-207ENST00000559037 CYP11A1P05108 521 aa7.44□□□□□ -1.22
CASC4-207ENST00000559037 MAPK8P45983 427 aa7.44□□□□□ -1.22
CASC4-207ENST00000559037 RSPO4Q2I0M5 234 aaPredicted RBP7.44□□□□□ -1.22
CASC4-207ENST00000559037 KIAA1211Q6ZU35 1233 aa7.44□□□□□ -1.22
CASC4-207ENST00000559037 EPS8L3Q8TE67 593 aaKnown RBP7.44□□□□□ -1.22
CASC4-207ENST00000559037 TP53INP1Q96A56 240 aa7.44□□□□□ -1.22
CASC4-207ENST00000559037 KCNK4Q9NYG8 393 aa7.44□□□□□ -1.22
CASC4-207ENST00000559037 SCAF11Q99590 1463 aaKnown RBP7.43□□□□□ -1.22
CASC4-207ENST00000559037 CHD2O14647 1828 aaKnown RBP7.43□□□□□ -1.22
CASC4-207ENST00000559037 TMEM131LA2VDJ0 1609 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 WISP1O95388 367 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 FURINP09958 794 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 GLB1P16278 677 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 ITGAEP38570 1179 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 NLRP12P59046 1061 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 SPRED3Q2MJR0 410 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 SLC51AQ86UW1 340 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 GLIS3Q8NEA6 775 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 MEGF10Q96KG7 1140 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 RUSC1Q9BVN2 902 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 SPG7Q9UQ90 795 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 TMEM2Q9UHN6 1383 aa7.43□□□□□ -1.22
CASC4-207ENST00000559037 DYRK3O43781 588 aa7.42□□□□□ -1.22
CASC4-207ENST00000559037 AP3B2Q13367 1082 aa7.42□□□□□ -1.22
CASC4-207ENST00000559037 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.42□□□□□ -1.22
CASC4-207ENST00000559037 UBASH3BQ8TF42 649 aa7.42□□□□□ -1.22
CASC4-207ENST00000559037 BCO2Q9BYV7 579 aa7.42□□□□□ -1.22
CASC4-207ENST00000559037 LOC100289279A0A1B0GTE1 492 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 GSTT1P30711 240 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 GSTM4Q03013 218 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 ZNF423Q2M1K9 1284 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 FDX2Q6P4F2 183 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 DTHD1Q6ZMT9 781 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 HOMEZQ8IX15 550 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 AGGF1Q8N302 714 aaeCLIP7.41□□□□□ -1.22
CASC4-207ENST00000559037 ANKRD24Q8TF21 1146 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 USP26Q9BXU7 913 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 NRSN2Q9GZP1 204 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 SUGCTQ9HAC7 445 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 CYP4F12Q9HCS2 524 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 PPM1HQ9ULR3 514 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 HIF3AQ9Y2N7 669 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 EID1Q9Y6B2 187 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 NUP155O75694 1391 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 ALKQ9UM73 1620 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 SPHKAPQ2M3C7 1700 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 KIF1BO60333 1816 aa7.41□□□□□ -1.22
CASC4-207ENST00000559037 DDX3YO15523 660 aaKnown RBP7.4□□□□□ -1.22
CASC4-207ENST00000559037 PRPF40AO75400 957 aaKnown RBP7.4□□□□□ -1.22
CASC4-207ENST00000559037 ALX3O95076 343 aa7.4□□□□□ -1.22
CASC4-207ENST00000559037 P4HBP07237 508 aaKnown RBP7.4□□□□□ -1.22
CASC4-207ENST00000559037 PPP2R3AQ06190 1150 aa7.4□□□□□ -1.22
CASC4-207ENST00000559037 SMG8Q8ND04 991 aaKnown RBP7.4□□□□□ -1.22
CASC4-207ENST00000559037 FAM46AQ96IP4 442 aaKnown RBP7.4□□□□□ -1.22
CASC4-207ENST00000559037 TMPRSS13Q9BYE2 586 aa7.4□□□□□ -1.22
CASC4-207ENST00000559037 ADGRB3O60242 1522 aa7.4□□□□□ -1.22
CASC4-207ENST00000559037 LRRC7Q96NW7 1537 aa7.4□□□□□ -1.22
CASC4-207ENST00000559037 ZFYVE9O95405 1425 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 NAIPQ13075 1403 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 SYNGAP1Q96PV0 1343 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 ANKRD33BA6NCL7 494 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 GSC2O15499 205 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 DHX15O43143 795 aaKnown RBP7.39□□□□□ -1.23
CASC4-207ENST00000559037 SART1O43290 800 aaKnown RBP7.39□□□□□ -1.23
CASC4-207ENST00000559037 TOM1O60784 492 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 LDHBP07195 334 aaKnown RBP7.39□□□□□ -1.23
CASC4-207ENST00000559037 FCGRTP55899 365 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 CCDC27Q2M243 656 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 EXOSC6Q5RKV6 272 aaKnown RBP7.39□□□□□ -1.23
CASC4-207ENST00000559037 NUTM2GQ5VZR2 741 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 PRR23CQ6ZRP0 262 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 CORO1BQ9BR76 489 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 SEMA6BQ9H3T3 888 aa7.39□□□□□ -1.23
CASC4-207ENST00000559037 KCNA6P17658 529 aa7.38□□□□□ -1.23
CASC4-207ENST00000559037 POU4F3Q15319 338 aa7.38□□□□□ -1.23
CASC4-207ENST00000559037 EAPPQ56P03 285 aaPredicted RBP7.38□□□□□ -1.23
CASC4-207ENST00000559037 HGSNATQ68CP4 663 aa7.38□□□□□ -1.23
CASC4-207ENST00000559037 PI16Q6UXB8 463 aa7.38□□□□□ -1.23
CASC4-207ENST00000559037 DNAJC14Q6Y2X3 702 aaPredicted RBP7.38□□□□□ -1.23
CASC4-207ENST00000559037 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.38□□□□□ -1.23
CASC4-207ENST00000559037 UTP4Q969X6 686 aaKnown RBP7.38□□□□□ -1.23
CASC4-207ENST00000559037 CEP44Q9C0F1 390 aa7.38□□□□□ -1.23
CASC4-207ENST00000559037 TMEM39AQ9NV64 488 aa7.38□□□□□ -1.23
CASC4-207ENST00000559037 FAM8A1Q9UBU6 413 aa7.38□□□□□ -1.23
CASC4-207ENST00000559037 ZBTB7CA1YPR0 619 aa7.37□□□□□ -1.23
CASC4-207ENST00000559037 GNA15P30679 374 aa7.37□□□□□ -1.23
CASC4-207ENST00000559037 NXPE4Q6UWF7 544 aa7.37□□□□□ -1.23
CASC4-207ENST00000559037 MYRFLQ96LU7 910 aa7.37□□□□□ -1.23
CASC4-207ENST00000559037 SLC26A8Q96RN1 970 aa7.37□□□□□ -1.23
CASC4-207ENST00000559037 UBL7Q96S82 380 aaPredicted RBP7.37□□□□□ -1.23
CASC4-207ENST00000559037 TRIM56Q9BRZ2 755 aaKnown RBP7.37□□□□□ -1.23
CASC4-207ENST00000559037 C12orf49Q9H741 205 aa7.37□□□□□ -1.23
CASC4-207ENST00000559037 TIAF1O95411 115 aa7.36□□□□□ -1.23
CASC4-207ENST00000559037 MAOBP27338 520 aa7.36□□□□□ -1.23
CASC4-207ENST00000559037 NPAS4Q8IUM7 802 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms