RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 ZFP64Q9NPA5 681 aa6.42□□□□□ -1.38
VPS13C-207ENST00000558919 TACC3Q9Y6A5 838 aa6.42□□□□□ -1.38
VPS13C-207ENST00000558919 FAM170BA6NMN3 283 aa6.41□□□□□ -1.38
VPS13C-207ENST00000558919 HYAL3O43820 417 aaPredicted RBP6.41□□□□□ -1.38
VPS13C-207ENST00000558919 CYP27C1Q4G0S4 372 aa6.41□□□□□ -1.38
VPS13C-207ENST00000558919 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.41□□□□□ -1.38
VPS13C-207ENST00000558919 RHOVQ96L33 236 aa6.41□□□□□ -1.38
VPS13C-207ENST00000558919 TMEM74Q96NL1 305 aa6.41□□□□□ -1.38
VPS13C-207ENST00000558919 WNT10AQ9GZT5 417 aa6.41□□□□□ -1.38
VPS13C-207ENST00000558919 KIAA1324LA8MWY0 1029 aaPredicted RBP6.4□□□□□ -1.38
VPS13C-207ENST00000558919 GFRA2O00451 464 aa6.4□□□□□ -1.38
VPS13C-207ENST00000558919 FOSL1P15407 271 aa6.4□□□□□ -1.38
VPS13C-207ENST00000558919 SSTR4P31391 388 aa6.4□□□□□ -1.38
VPS13C-207ENST00000558919 GBP2P32456 591 aaPredicted RBP6.4□□□□□ -1.38
VPS13C-207ENST00000558919 RPL6Q02878 288 aaKnown RBP6.4□□□□□ -1.38
VPS13C-207ENST00000558919 CDK5R2Q13319 367 aa6.4□□□□□ -1.38
VPS13C-207ENST00000558919 CAMK2GQ13555 558 aaPredicted RBP6.4□□□□□ -1.38
VPS13C-207ENST00000558919 WIPI1Q5MNZ9 446 aaPredicted RBP6.4□□□□□ -1.38
VPS13C-207ENST00000558919 ZNF765Q7L2R6 523 aa6.4□□□□□ -1.38
VPS13C-207ENST00000558919 CDC37L1Q7L3B6 337 aa6.4□□□□□ -1.38
VPS13C-207ENST00000558919 ERMP1Q7Z2K6 904 aa6.4□□□□□ -1.38
VPS13C-207ENST00000558919 PRAMEF27A3QJZ7 478 aa6.39□□□□□ -1.39
VPS13C-207ENST00000558919 CYP26A1O43174 497 aa6.39□□□□□ -1.39
VPS13C-207ENST00000558919 MED26O95402 600 aa6.39□□□□□ -1.39
VPS13C-207ENST00000558919 PF4P02776 101 aa6.39□□□□□ -1.39
VPS13C-207ENST00000558919 CDK8P49336 464 aa6.39□□□□□ -1.39
VPS13C-207ENST00000558919 LDLRAD1Q5T700 205 aa6.39□□□□□ -1.39
VPS13C-207ENST00000558919 RGS22Q8NE09 1264 aa6.39□□□□□ -1.39
VPS13C-207ENST00000558919 PCMTD2Q9NV79 361 aa6.39□□□□□ -1.39
VPS13C-207ENST00000558919 FAM87AP0C7U9 286 aa6.38□□□□□ -1.39
VPS13C-207ENST00000558919 VAMP1P23763 118 aa6.38□□□□□ -1.39
VPS13C-207ENST00000558919 CAP2P40123 477 aa6.38□□□□□ -1.39
VPS13C-207ENST00000558919 HS2ST1Q7LGA3 356 aa6.38□□□□□ -1.39
VPS13C-207ENST00000558919 DTX1Q86Y01 620 aa6.38□□□□□ -1.39
VPS13C-207ENST00000558919 TMEM87AQ8NBN3 555 aa6.38□□□□□ -1.39
VPS13C-207ENST00000558919 GATAD2BQ8WXI9 593 aa6.38□□□□□ -1.39
VPS13C-207ENST00000558919 JARID2Q92833 1246 aaPredicted RBP6.38□□□□□ -1.39
VPS13C-207ENST00000558919 DUSP23Q9BVJ7 150 aa6.38□□□□□ -1.39
VPS13C-207ENST00000558919 FAM221AA4D161 298 aa6.37□□□□□ -1.39
VPS13C-207ENST00000558919 F6X3S4 739 aa6.37□□□□□ -1.39
VPS13C-207ENST00000558919 CILPO75339 1184 aa6.37□□□□□ -1.39
VPS13C-207ENST00000558919 LRIG2O94898 1065 aa6.37□□□□□ -1.39
VPS13C-207ENST00000558919 SPINK2P20155 84 aa6.37□□□□□ -1.39
VPS13C-207ENST00000558919 HOXA10P31260 410 aaPredicted RBP6.37□□□□□ -1.39
VPS13C-207ENST00000558919 ETF1P62495 437 aaKnown RBP6.37□□□□□ -1.39
VPS13C-207ENST00000558919 BNC2Q6ZN30 1099 aaPredicted RBP6.37□□□□□ -1.39
VPS13C-207ENST00000558919 UBE3DQ7Z6J8 389 aa6.37□□□□□ -1.39
VPS13C-207ENST00000558919 HID1Q8IV36 788 aa6.37□□□□□ -1.39
VPS13C-207ENST00000558919 BACH2Q9BYV9 841 aa6.37□□□□□ -1.39
VPS13C-207ENST00000558919 KBTBD4Q9NVX7 518 aa6.37□□□□□ -1.39
VPS13C-207ENST00000558919 CCDC9Q9Y3X0 531 aaKnown RBP6.37□□□□□ -1.39
VPS13C-207ENST00000558919 MINDY4BA8MYZ0 360 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 BPNT1O95861 308 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 F13A1P00488 732 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 GRK4P32298 578 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 PDE4BQ07343 736 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 SLBPQ14493 270 aaKnown RBP eCLIP6.36□□□□□ -1.39
VPS13C-207ENST00000558919 MSMPQ1L6U9 139 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 SNAP47Q5SQN1 464 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 TOP6BLQ8N6T0 577 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 FBRSQ9HAH7 460 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 COPRSQ9NQ92 184 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 PRDM10Q9NQV6 1147 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 KCNQ5Q9NR82 932 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 METTL5Q9NRN9 209 aaKnown RBP6.36□□□□□ -1.39
VPS13C-207ENST00000558919 GGT7Q9UJ14 662 aa6.36□□□□□ -1.39
VPS13C-207ENST00000558919 ROBO2Q9HCK4 1378 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 LEFTY1O75610 366 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 GARTP22102 1010 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 ARMCX6Q7L4S7 300 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 NBPF11Q86T75 865 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 MFSD2AQ8NA29 543 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 GOLM1Q8NBJ4 401 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 FOXQ1Q9C009 403 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 MKNK2Q9HBH9 465 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 LRRC4CQ9HCJ2 640 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 ADAM30Q9UKF2 790 aa6.35□□□□□ -1.39
VPS13C-207ENST00000558919 PRNPP04156 253 aa6.34□□□□□ -1.39
VPS13C-207ENST00000558919 PGRP06401 933 aa6.34□□□□□ -1.39
VPS13C-207ENST00000558919 ZNF76P36508 570 aa6.34□□□□□ -1.39
VPS13C-207ENST00000558919 EIF4A3P38919 411 aaKnown RBP6.34□□□□□ -1.39
VPS13C-207ENST00000558919 FAM160A1Q05DH4 1040 aa6.34□□□□□ -1.39
VPS13C-207ENST00000558919 MPP2Q14168 576 aa6.34□□□□□ -1.39
VPS13C-207ENST00000558919 FAM196AQ6ZSG2 479 aa6.34□□□□□ -1.39
VPS13C-207ENST00000558919 MRPL41Q8IXM3 137 aaKnown RBP6.34□□□□□ -1.39
VPS13C-207ENST00000558919 ZC3H7BQ9UGR2 993 aaKnown RBP6.34□□□□□ -1.39
VPS13C-207ENST00000558919 SUPT16HQ9Y5B9 1047 aaKnown RBP6.34□□□□□ -1.39
VPS13C-207ENST00000558919 PRR36Q9H6K5 1346 aa6.33□□□□□ -1.4
VPS13C-207ENST00000558919 IGF2BP3O00425 579 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS13C-207ENST00000558919 GREM1O60565 184 aa6.33□□□□□ -1.4
VPS13C-207ENST00000558919 RECKO95980 971 aa6.33□□□□□ -1.4
VPS13C-207ENST00000558919 CST3P01034 146 aaPredicted RBP6.33□□□□□ -1.4
VPS13C-207ENST00000558919 FANCCQ00597 558 aa6.33□□□□□ -1.4
VPS13C-207ENST00000558919 NKG7Q16617 165 aa6.33□□□□□ -1.4
VPS13C-207ENST00000558919 SLC6A19Q695T7 634 aa6.33□□□□□ -1.4
VPS13C-207ENST00000558919 FBXL19Q6PCT2 694 aa6.33□□□□□ -1.4
VPS13C-207ENST00000558919 FAM214BQ7L5A3 538 aa6.33□□□□□ -1.4
VPS13C-207ENST00000558919 LRRC3Q9BY71 257 aa6.33□□□□□ -1.4
VPS13C-207ENST00000558919 BSDC1Q9NW68 430 aaPredicted RBP6.33□□□□□ -1.4
VPS13C-207ENST00000558919 TJP2Q9UDY2 1190 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms